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(-) Description

Title :  CRYSTAL STRUCTURE OF DR2231, THE MAZG-LIKE PROTEIN FROM DEINOCOCCUS RADIODURANS, APO STRUCTURE
 
Authors :  A. M. D. Goncalves, D. Desanctis, S. M. Mcsweeney
Date :  01 Apr 11  (Deposition) - 06 Jul 11  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Keywords :  Hydrolase, Dimeric Dutpase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. M. D. Goncalves, D. Desanctis, S. M. Mcsweeney
Structural And Functional Insights Into Dr2231 Protein, The Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase From Deinococcus Radiodurans.
J. Biol. Chem. V. 286 30691 2011
PubMed-ID: 21733847  |  Reference-DOI: 10.1074/JBC.M111.247999

(-) Compounds

Molecule 1 - MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE
    Chains: A, B, C, D, E, F
    EC Number: 3.6.1.19
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET151/D-TOPO
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: DEINOCOCCUS RADIODURANS
    Organism Taxid: 243230
    Strain: R1

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 41)

Asymmetric Unit (2, 41)
No.NameCountTypeFull Name
1GOL22Ligand/IonGLYCEROL
2SO419Ligand/IonSULFATE ION
Biological Unit 1 (2, 15)
No.NameCountTypeFull Name
1GOL7Ligand/IonGLYCEROL
2SO48Ligand/IonSULFATE ION
Biological Unit 2 (2, 15)
No.NameCountTypeFull Name
1GOL9Ligand/IonGLYCEROL
2SO46Ligand/IonSULFATE ION
Biological Unit 3 (2, 11)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL
2SO45Ligand/IonSULFATE ION

(-) Sites  (41, 41)

Asymmetric Unit (41, 41)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:69 , GLY A:71 , GLN B:142 , GLY E:128BINDING SITE FOR RESIDUE GOL A 1145
02AC2SOFTWAREARG A:135 , SO4 A:1150 , HOH A:2129 , PRO B:75 , PRO C:131 , HOH C:2146BINDING SITE FOR RESIDUE GOL A 1146
03AC3SOFTWAREPRO A:26 , GLU A:27 , ARG A:28 , HOH A:2035BINDING SITE FOR RESIDUE GOL A 1147
04AC4SOFTWAREHIS A:15 , THR A:25 , PRO A:26 , GLU A:27 , ASP A:92 , ILE A:96 , ASP A:97 , HOH A:2093BINDING SITE FOR RESIDUE GOL A 1148
05AC5SOFTWAREARG A:19 , ARG A:38 , HOH A:2131 , HOH A:2132BINDING SITE FOR RESIDUE SO4 A 1149
06AC6SOFTWAREALA A:132 , ASP A:133 , VAL A:134 , ARG A:135 , GOL A:1146 , HIS B:78BINDING SITE FOR RESIDUE SO4 A 1150
07AC7SOFTWAREARG A:118 , LYS A:122BINDING SITE FOR RESIDUE SO4 A 1151
08AC8SOFTWAREARG B:19 , HOH B:2119 , HOH B:2120 , HOH B:2121 , GLN C:62 , PRO D:34BINDING SITE FOR RESIDUE GOL B 1145
09AC9SOFTWAREPRO B:26 , GLU B:27 , ARG B:28 , HOH B:2038BINDING SITE FOR RESIDUE GOL B 1146
10BC1SOFTWARELYS B:125 , HOH B:2123 , HIS F:57BINDING SITE FOR RESIDUE GOL B 1147
11BC2SOFTWAREHOH A:2128 , SER B:69 , ALA B:70 , GLY B:71 , ARG C:130BINDING SITE FOR RESIDUE SO4 B 1148
12BC3SOFTWAREARG B:118 , LYS B:122BINDING SITE FOR RESIDUE SO4 B 1149
13BC4SOFTWAREHOH B:2124 , HOH B:2126 , ARG D:19BINDING SITE FOR RESIDUE SO4 B 1150
14BC5SOFTWAREHIS A:78 , ALA B:132 , VAL B:134 , ARG B:135BINDING SITE FOR RESIDUE SO4 B 1151
15BC6SOFTWAREARG B:38 , HOH B:2127 , ARG C:19BINDING SITE FOR RESIDUE SO4 B 1152
16BC7SOFTWAREARG C:13 , HOH C:2037 , HOH D:2100BINDING SITE FOR RESIDUE GOL C 1145
17BC8SOFTWAREGLU C:139 , HOH C:2151 , HOH C:2154 , HOH C:2160BINDING SITE FOR RESIDUE GOL C 1146
18BC9SOFTWAREALA C:132 , ASP C:133 , VAL C:134 , ARG C:135 , HOH C:2161 , ALA D:74 , PRO D:75 , HIS D:78BINDING SITE FOR RESIDUE GOL C 1147
19CC1SOFTWARESER C:69 , GLY C:71 , HOH C:2162 , GLU F:127 , GLY F:128 , GOL F:1147 , HOH F:2106BINDING SITE FOR RESIDUE SO4 C 1148
20CC2SOFTWAREARG A:19 , HOH C:2164 , HOH C:2165BINDING SITE FOR RESIDUE SO4 C 1149
21CC3SOFTWAREARG C:118 , LYS C:122BINDING SITE FOR RESIDUE SO4 C 1150
22CC4SOFTWAREALA C:74 , PRO C:75 , HIS C:78 , ALA D:132 , ASP D:133 , VAL D:134 , ARG D:135 , HOH D:2138 , HOH D:2139 , HOH D:2140BINDING SITE FOR RESIDUE GOL D 1145
23CC5SOFTWAREHIS D:15 , GLU D:27 , ASP D:92 , GLY D:95 , ILE D:96 , ASP D:97 , HOH D:2141 , HOH D:2142BINDING SITE FOR RESIDUE GOL D 1146
24CC6SOFTWAREGLN C:142 , SER D:69 , ALA D:70 , GLY D:71BINDING SITE FOR RESIDUE GOL D 1147
25CC7SOFTWAREARG D:118 , LYS D:122 , HIS E:57 , ALA E:60 , ARG E:61BINDING SITE FOR RESIDUE GOL D 1148
26CC8SOFTWARELYS D:112 , GLN D:123 , LEU D:124 , LYS D:125 , HOH D:2145 , HOH D:2146 , HOH D:2150 , ARG E:61 , HOH E:2060BINDING SITE FOR RESIDUE GOL D 1149
27CC9SOFTWAREARG D:117 , ARG D:118 , ALA D:119 , HOH D:2147 , HOH D:2148 , ARG E:117 , ALA F:20 , ILE F:21 , GLY F:22BINDING SITE FOR RESIDUE GOL D 1150
28DC1SOFTWAREGLU D:127 , GLY D:128 , SER E:69 , GLY E:71BINDING SITE FOR RESIDUE SO4 D 1151
29DC2SOFTWAREARG D:135 , ARG F:135 , GOL F:1148BINDING SITE FOR RESIDUE SO4 D 1152
30DC3SOFTWARELYS D:112 , LYS D:125 , HOH D:2149 , HOH D:2150BINDING SITE FOR RESIDUE SO4 D 1153
31DC4SOFTWAREGLU E:12 , HIS E:15 , SO4 E:1149 , HOH E:2096 , HOH E:2098BINDING SITE FOR RESIDUE GOL E 1145
32DC5SOFTWAREARG D:19 , ARG E:38 , HOH E:2100 , HOH E:2101 , HOH E:2102BINDING SITE FOR RESIDUE SO4 E 1146
33DC6SOFTWAREARG E:118 , LYS E:122BINDING SITE FOR RESIDUE SO4 E 1147
34DC7SOFTWAREARG C:38 , LEU D:59 , ARG E:19 , HOH E:2103 , HOH E:2104 , HOH E:2105BINDING SITE FOR RESIDUE SO4 E 1148
35DC8SOFTWAREHIS E:15 , ARG E:19 , GOL E:1145 , HOH E:2106 , HOH E:2108BINDING SITE FOR RESIDUE SO4 E 1149
36DC9SOFTWAREHIS C:57 , ARG C:61 , ARG F:118 , LYS F:122 , HOH F:2105BINDING SITE FOR RESIDUE GOL F 1145
37EC1SOFTWAREHIS F:15 , PRO F:26 , GLU F:27 , ASP F:92 , ASP F:97BINDING SITE FOR RESIDUE GOL F 1146
38EC2SOFTWARESO4 C:1148 , HOH C:2108 , LYS F:125 , TRP F:129 , HOH F:2106 , HOH F:2107 , HOH F:2108 , HOH F:2109BINDING SITE FOR RESIDUE GOL F 1147
39EC3SOFTWARESO4 D:1152 , HIS E:78 , ALA F:132 , ASP F:133 , VAL F:134 , ARG F:135BINDING SITE FOR RESIDUE GOL F 1148
40EC4SOFTWAREHOH E:2095 , SER F:69 , GLY F:71BINDING SITE FOR RESIDUE GOL F 1149
41EC5SOFTWARELYS F:112 , LYS F:122 , LYS F:125 , HOH F:2110 , HOH F:2111BINDING SITE FOR RESIDUE SO4 F 1150

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:6 -B:6
2C:6 -D:6

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2YF4)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2YF4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2YF4)

(-) Exons   (0, 0)

(no "Exon" information available for 2YF4)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:150
 aligned with Q9RS96_DEIRA | Q9RS96 from UniProtKB/TrEMBL  Length:148

    Alignment length:150
                                  1                                                                                                                                               
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144
         Q9RS96_DEIRA     - ------MSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...................hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2yf4 A  -5 GIDPFTMSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
                                     4        14        24        34        44        54        64        74        84        94       104       114       124       134       144


Chain B from PDB  Type:PROTEIN  Length:146
 aligned with Q9RS96_DEIRA | Q9RS96 from UniProtKB/TrEMBL  Length:148

    Alignment length:146
                             1  4 5                                                                                                                                           
                             |  | |  8        18        28        38        48        58        68        78        88        98       108       118       128       138      
         Q9RS96_DEIRA     - -MSDL-PCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2yf4 B  -5 GIDPFTPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
                                 ||  8        18        28        38        48        58        68        78        88        98       108       118       128       138      
                                 0|                                                                                                                                           
                                  5                                                                                                                                           


Chain C from PDB  Type:PROTEIN  Length:149
 aligned with Q9RS96_DEIRA | Q9RS96 from UniProtKB/TrEMBL  Length:148

    Alignment length:149
                                 1                                                                                                                                               
                                 |   5        15        25        35        45        55        65        75        85        95       105       115       125       135         
         Q9RS96_DEIRA     - -----MSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2yf4 C  -4 IDPFTMSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
                                     5        15        25        35        45        55        65        75        85        95       105       115       125       135         


Chain D from PDB  Type:PROTEIN  Length:150
 aligned with Q9RS96_DEIRA | Q9RS96 from UniProtKB/TrEMBL  Length:148

    Alignment length:150
                                  1                                                                                                                                               
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144
         Q9RS96_DEIRA     - ------MSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhh.....hhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2yf4 D  -5 GIDPFTMSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
                                     4        14        24        34        44        54        64        74        84        94       104       114       124       134       144


Chain E from PDB  Type:PROTEIN  Length:149
 aligned with Q9RS96_DEIRA | Q9RS96 from UniProtKB/TrEMBL  Length:148

    Alignment length:149
                                 1                                                                                                                                               
                                 |   5        15        25        35        45        55        65        75        85        95       105       115       125       135         
         Q9RS96_DEIRA     - -----MSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2yf4 E  -4 IDPFTMSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
                                     5        15        25        35        45        55        65        75        85        95       105       115       125       135         


Chain F from PDB  Type:PROTEIN  Length:143
 aligned with Q9RS96_DEIRA | Q9RS96 from UniProtKB/TrEMBL  Length:148

    Alignment length:144
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140    
         Q9RS96_DEIRA     1 MSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) -------------PRA-PH-2y f4F01 F:14-109                                                                        ----------------------------------- Pfam domains (1)
           Pfam domains (2) -------------PRA-PH-2y f4F02 F:14-109                                                                        ----------------------------------- Pfam domains (2)
           Pfam domains (3) -------------PRA-PH-2y f4F03 F:14-109                                                                        ----------------------------------- Pfam domains (3)
           Pfam domains (4) -------------PRA-PH-2y f4F04 F:14-109                                                                        ----------------------------------- Pfam domains (4)
           Pfam domains (5) -------------PRA-PH-2y f4F05 F:14-109                                                                        ----------------------------------- Pfam domains (5)
           Pfam domains (6) -------------PRA-PH-2y f4F06 F:14-109                                                                        ----------------------------------- Pfam domains (6)
         Sec.struct. author ........hhhhhhhhhhhhhh-.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2yf4 F  -4 IDPFTCPPTNAERLHEFHRAIG-ATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHA 144
                                ||  10        20 | |    30        40        50        60        70        80        90       100       110       120       130       140    
                                0|              22 |                                                                                                                        
                                 6                24
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2YF4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2YF4)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: MazG (25)
(-)
Family: PRA-PH (10)
(-)
Deinococcus radiodurans (6)
1aPRA-PH-2yf4F01F:14-109
1bPRA-PH-2yf4F02F:14-109
1cPRA-PH-2yf4F03F:14-109
1dPRA-PH-2yf4F04F:14-109
1ePRA-PH-2yf4F05F:14-109
1fPRA-PH-2yf4F06F:14-109

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Q9RS96_DEIRA | Q9RS96)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0047429    nucleoside-triphosphate diphosphatase activity    Catalysis of the reaction: H2O + a nucleoside triphosphate = diphosphate + a nucleotide.

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  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2yf4)
 
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        Q9RS96_DEIRA | Q9RS96: 2yeu 2yf3 2yf9 2yfc 2yfd 5hva 5hwu 5hx1 5hyl 5hzz 5i0j 5i0m

(-) Related Entries Specified in the PDB File

2yeu STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEX WITH GD
2yf3 CRYSTAL STRUCTURE OF DR2231, THE MAZG-LIKE PROTEIN FROM DEINOCOCCUS RADIODURANS, COMPLEX WITH MANGANESE
2yf9 STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, NATIVE FORM
2yfc STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH MN AND DUMP
2yfd STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH MG AND DUMP