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(-) Description

Title :  STRUCTURE OF H2 AVIAN JENA HEMAGGLUTININ WITH HUMAN RECEPTOR
 
Authors :  J. Liu, D. J. Stevens, L. F. Haire, P. A. Walker, P. J. Coombs, R. J. Russell, S. J. Gamblin, J. J. Skehel
Date :  01 Sep 09  (Deposition) - 29 Sep 09  (Release) - 20 Oct 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I
Biol. Unit 1:  D,E,F  (1x)
Biol. Unit 2:  A,B,C  (1x)
Biol. Unit 3:  G,H,I  (1x)
Keywords :  Viral Protein, Glycoprotein, Lipoprotein, Envelope Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Liu, D. J. Stevens, L. F. Haire, P. A. Walker, P. J. Coombs, R. J. Russell, S. J. Gamblin, J. J. Skehel
From The Cover: Structures Of Receptor Complexes Formed By Hemagglutinins From The Asian Influenza Pandemic Of 1957.
Proc. Natl. Acad. Sci. Usa V. 106 17175 2009
PubMed-ID: 19805083  |  Reference-DOI: 10.1073/PNAS.0906849106

(-) Compounds

Molecule 1 - HEMAGGLUTININ
    Chains: A, B, C, D, E, F, G, H, I
    Fragment: RESIDUES 1-507
    Organism Scientific: INFLUENZA A VIRUS (A/CHICKEN/POTSDAM/4705/1984(H2N2))
    Organism Taxid: 139280

 Structural Features

(-) Chains, Units

  123456789
Asymmetric Unit : ABCDEFGHI
Biological Unit 1 (1x):    DEF   
Biological Unit 2 (1x): ABC      
Biological Unit 3 (1x):       GHI

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric Unit (2, 3)
No.NameCountTypeFull Name
1GAL1Ligand/IonBETA-D-GALACTOSE
2SIA2Ligand/IonO-SIALIC ACID
Biological Unit 1 (2, 3)
No.NameCountTypeFull Name
1GAL1Ligand/IonBETA-D-GALACTOSE
2SIA2Ligand/IonO-SIALIC ACID
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1GAL-1Ligand/IonBETA-D-GALACTOSE
2SIA-1Ligand/IonO-SIALIC ACID
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1GAL-1Ligand/IonBETA-D-GALACTOSE
2SIA-1Ligand/IonO-SIALIC ACID

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR D:95 , GLY D:133 , GLY D:134 , SER D:135 , GLN D:136 , TRP D:152 , HIS D:182 , GLU D:189 , LEU D:193 , GLN D:225 , GLY D:227BINDING SITE FOR RESIDUE SIA D1497
2AC2SOFTWARETYR F:95 , GLY F:133 , GLY F:134 , SER F:135 , GLN F:136 , ASN F:185 , GLU F:189 , LEU F:193 , GLN F:225 , GAL F:1498BINDING SITE FOR RESIDUE SIA F1497
3AC3SOFTWARESIA F:1497BINDING SITE FOR RESIDUE GAL F1498

(-) SS Bonds  (53, 53)

Asymmetric Unit
No.Residues
1A:8 -A:466
2A:46 -A:277
3A:59 -A:71
4A:281 -A:305
5A:473 -A:477
6B:8 -B:466
7B:46 -B:277
8B:59 -B:71
9B:94 -B:138
10B:281 -B:305
11B:473 -B:477
12C:8 -C:466
13C:46 -C:277
14C:59 -C:71
15C:94 -C:138
16C:281 -C:305
17C:473 -C:477
18D:8 -D:466
19D:46 -D:277
20D:59 -D:71
21D:94 -D:138
22D:281 -D:305
23D:473 -D:477
24E:8 -E:466
25E:46 -E:277
26E:59 -E:71
27E:94 -E:138
28E:281 -E:305
29E:473 -E:477
30F:8 -F:466
31F:46 -F:277
32F:59 -F:71
33F:94 -F:138
34F:281 -F:305
35F:473 -F:477
36G:8 -G:466
37G:46 -G:277
38G:59 -G:71
39G:94 -G:138
40G:281 -G:305
41G:473 -G:477
42H:8 -H:466
43H:46 -H:277
44H:59 -H:71
45H:94 -H:138
46H:281 -H:305
47H:473 -H:477
48I:8 -I:466
49I:46 -I:277
50I:59 -I:71
51I:94 -I:138
52I:281 -I:305
53I:473 -I:477

(-) Cis Peptide Bonds  (27, 27)

Asymmetric Unit
No.Residues
1Thr A:113 -His A:114
2Phe A:141 -Asp A:142
3Ser A:361 -Gly A:362
4Thr B:113 -His B:114
5Phe B:141 -Asp B:142
6Ser B:361 -Gly B:362
7Thr C:113 -His C:114
8Phe C:141 -Asp C:142
9Ser C:361 -Gly C:362
10Thr D:113 -His D:114
11Phe D:141 -Asp D:142
12Ser D:361 -Gly D:362
13Thr E:113 -His E:114
14Phe E:141 -Asp E:142
15Ser E:361 -Gly E:362
16Thr F:113 -His F:114
17Phe F:141 -Asp F:142
18Ser F:361 -Gly F:362
19Thr G:113 -His G:114
20Phe G:141 -Asp G:142
21Ser G:361 -Gly G:362
22Thr H:113 -His H:114
23Phe H:141 -Asp H:142
24Ser H:361 -Gly H:362
25Thr I:113 -His I:114
26Phe I:141 -Asp I:142
27Ser I:361 -Gly I:362

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2WRF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2WRF)

(-) Exons   (0, 0)

(no "Exon" information available for 2WRF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrfa1 A:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrfa2 A:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfA01 A:7-51,A:273-496                     2wrfA02 A:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfA01 A:7-51,A:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................eee.ee...............ee...........................ee................hhhhhhhhh.....ee.....hhhhh.......................eee..............ee......eeeeeeee...hhhhhhhhhh.....eee......eee................eeeeeeee....ee..ee....eee....ee..................................ee...................eee........----................................................hhhhhhhhhh...............hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.......eee.....eee....hhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf A   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrfb1 B:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrfb2 B:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfB01 B:7-51,B:273-496                     2wrfB02 B:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfB01 B:7-51,B:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.......ee...eee.ee...............ee............hhhhh......ee..eee...............hhhhhhhhh..ee........hhhhh.......................eee..............ee......eeeeeeee...hhhhhhhhhh.....eee......eee................eeeeeeee....ee..ee....eee..............ee........................ee...................eee........----....................................hhhhhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eee.......hhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf B   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330                                                                                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrfc1 C:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrfc2 C:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfC01 C:7-51,C:273-496                     2wrfC02 C:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfC01 C:7-51,C:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.......ee...eee.ee...............ee............hhhhh......ee..eee...............hhhhhhhhh..ee........hhhhh.......................eee..............ee......eeeeeeee...hhhhhhhhhh.....eee......eee................eeeeeeee....ee..ee....eee..............ee........................ee...................eee........----....................................hhhhhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eee.......hhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf C   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330                                                                                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrfd1 D:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrfd2 D:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfD01 D:7-51,D:273-496                     2wrfD02 D:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfD01 D:7-51,D:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eee.......eee......ee...............ee...........................eee.............eehhhhhhhhhhh...ee.................................ee...............ee.....eeeeeeeee...hhhhhhhhhh.....ee..........................eeeeeeee....ee..ee.....ee....ee........ee........................ee..............................----....................................hhhhhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eee.......hhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf D   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330                                                                                                                                                                      


Chain E from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrfe1 E:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrfe2 E:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfE01 E:7-51,E:273-496                     2wrfE02 E:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfE01 E:7-51,E:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.......ee...eee.ee...............ee............hhhhh......ee..eee...............hhhhhhhhh..ee........hhhhh.......................eee..............ee......eeeeeeee...hhhhhhhhhh.....eee......eee................eeeeeeee....ee..ee....eee..............ee........................ee...................eee........----....................................hhhhhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eee.......hhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf E   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330                                                                                                                                                                      


Chain F from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrff1 F:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrff2 F:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfF01 F:7-51,F:273-496                     2wrfF02 F:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfF01 F:7-51,F:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.......ee...eee.ee...............ee............hhhhh......ee..eee...............hhhhhhhhh..ee........hhhhh.......................eee..............ee......eeeeeeee...hhhhhhhhhh.....eee......eee................eeeeeeee....ee..ee....eee..............ee........................ee...................eee........----....................................hhhhhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eee.......hhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf F   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330                                                                                                                                                                      


Chain G from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrfg1 G:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrfg2 G:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfG01 G:7-51,G:273-496                     2wrfG02 G:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfG01 G:7-51,G:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.......ee...eee.ee...............ee............hhhhh......ee..eee...............hhhhhhhhh..ee........hhhhh.......................eee..............ee......eeeeeeee...hhhhhhhhhh.....eee......eee................eeeeeeee....ee..ee....eee..............ee........................ee...................eee........----......................................hhhhhhhh.hhhhhhh...................hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eee....hhhhhhhhhh...hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf G   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330                                                                                                                                                                      


Chain H from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrfh1 H:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrfh2 H:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfH01 H:7-51,H:273-496                     2wrfH02 H:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfH01 H:7-51,H:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.......ee...eee.ee...............ee............hhhhh......ee..eee...............hhhhhhhhh..ee........hhhhh.......................eee..............ee......eeeeeeee...hhhhhhhhhh.....eee......eee................eeeeeeee....ee..ee....eee..............ee........................ee...................eee........----....................................hhhhhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eee.......hhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf H   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330                                                                                                                                                                      


Chain I from PDB  Type:PROTEIN  Length:486
 aligned with Q67326_9INFA | Q67326 from UniProtKB/TrEMBL  Length:562

    Alignment length:490
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
         Q67326_9INFA    18 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLLSSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAIDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNAKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 507
               SCOP domains d2wrfi1 I:7-325 automated matches                                                                                                                                                                                                                                                                                              ----d2wrfi2 I:330-496 automated matches                                                                                                                                     SCOP domains
               CATH domains 2wrfI01 I:7-51,I:273-496                     2wrfI02 I:52-272  [code=3.90.209.20, no name defined]                                                                                                                                                                        2wrfI01 I:7-51,I:273-496  [code=3.90.20.10, no name d    efined]                                                                                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.......ee...eee.ee...............ee............hhhhh......ee..eee...............hhhhhhhhh..ee........hhhhh.......................eee..............ee......eeeeeeee...hhhhhhhhhh.....eee......eee................eeeeeeee....ee..ee....eee..............ee........................ee...................eee........----....................................hhhhhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..eee.....eee.......hhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wrf I   7 ICVGYHSNNSTEKVDTILERNVTVTHAQDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLTVPEWSYIMEKENPRNGLCYPGSFNDYEELKHLISSVTHFEKVKILPKDRWTQHTTTGGSQGCAVFDNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGAYVSVGTSTLNKRSLPEIATRPEVNGQGGRMEFSWTILDIWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNIHPLTIGECPKYVKSERLVLATGLRNVPQ----GLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLEKRLENLNKKMEDGFLDVWTYNAELLVLMENEMTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYSKYEEESK 496
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316        |-   |   336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496
                                                                                                                                                                                                                                                                                                                                                        325  330
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 18)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Coiled coil proteins (689)

(-) CATH Domains  (2, 18)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2WRF)

(-) Gene Ontology  (17, 17)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I   (Q67326_9INFA | Q67326)
molecular function
    GO:0046789    host cell surface receptor binding    Interacting selectively and non-covalently with a receptor on the host cell surface.
biological process
    GO:0075512    clathrin-dependent endocytosis of virus by host cell    Any clathrin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicle containing the virus.
    GO:0075509    endocytosis involved in viral entry into host cell    Any endocytosis that is involved in the uptake of a virus into a host cell.
    GO:0039654    fusion of virus membrane with host endosome membrane    Fusion of a virus membrane with a host endosome membrane. Occurs after internalization of the virus through the endosomal pathway, and results in release of the virus contents into the cell.
    GO:0019064    fusion of virus membrane with host plasma membrane    Fusion of a viral membrane with the host cell membrane during viral entry. Results in release of the virion contents into the cytoplasm.
    GO:0039663    membrane fusion involved in viral entry into host cell    Merging of the virion membrane and a host membrane (host plasma membrane or host organelle membrane) that is involved in the uptake of a virus into a host cell.
    GO:0019065    receptor-mediated endocytosis of virus by host cell    Any receptor-mediated endocytosis that is involved in the uptake of a virus into a host cell; successive instances of virus endocytosis result in the accumulation of virus particles within the cell.
    GO:0046718    viral entry into host cell    The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
    GO:0016032    viral process    A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
    GO:0019062    virion attachment to host cell    The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.
cellular component
    GO:0033644    host cell membrane    Double layer of lipid molecules as it encloses host cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0020002    host cell plasma membrane    The plasma membrane surrounding a host cell.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0019031    viral envelope    The lipid bilayer of a virion that surrounds the protein capsid. May also contain glycoproteins.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.
    GO:0055036    virion membrane    The lipid bilayer surrounding a virion.

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  2wrf
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  Q67326_9INFA | Q67326
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  Q67326_9INFA | Q67326
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 Related Entries

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(-) Related Entries Specified in the PDB File

2wr0 STRUCTURES OF INFLUENZA H2 HEMAGGLUTININS
2wr1 STRUCTURE OF INFLUENZA H2 HEMAGGLUTININ WITH HUMAN RECEPTOR
2wr2 STRUCTURE OF INFLUENZA H2 AVIAN HEMAGGLUTININ WITH AVIAN RECEPTOR
2wr3 STRUCTURE OF INFLUENZA H2 DUCK ONTARIO HEMAGGLUTININ WITH AVIAN RECEPTOR
2wr4 STRUCTURE OF INFLUENZA H2 DUCK ONTARIO HEMAGGLUTININ WITH HUMAN RECEPTOR
2wr5 STRUCTURE OF INFLUENZA H2 DUCK ONTARIO HEMAGGLUTININ
2wr7 THE STRUCTURE OF INFLUENZA H2 HUMAN SINGAPORE HEMAGGLUTININ WITH HUMAN RECEPTOR
2wrb THE STRUCTURE OF INFLUENZA H2 HUMAN SINGAPORE HEMAGGLUTININ WITH AVIAN RECEPTOR
2wrc THE STRUCTURE OF INFLUENZA H2 HUMAN SINGAPORE HEMAGGLUTININ
2wrd STRUCTURE OF H2 JAPAN HEMAGGLUTININ
2wre STRUCTURE OF H2 JAPAN HEMAGGLUTININ WITH HUMAN RECEPTOR
2wrg STRUCTURE OF H1 1918 HEMAGGLUTININ WITH HUMAN RECEPTOR
2wrh STRUCTURE OF H1 DUCK ALBERT HEMAGGLUTININ WITH HUMAN RECEPTOR