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(-) Description

Title :  CANINE ADENOVIRUS TYPE 2 FIBRE HEAD IN COMPLEX WITH CAR DOMAIN D1 AND SIALIC ACID
 
Authors :  E. Seiradake, D. Henaff, H. Wodrich, O. Billet, M. Perreau, C. Hippert, F. Mennechet, G. Schoehn, H. Lortat-Jacob, H. Dreja, S. Ibanes, V. Kal J. P. Wang, R. W. Finberg, S. Cusack, E. J. Kremer
Date :  26 Jan 09  (Deposition) - 17 Mar 09  (Release) - 12 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.91
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,V,X,Y,Z
Keywords :  Immunoglobulin Domain, Car, Knob, Fiber, Fibre, Cav-2, Canine, Complex, Erythrocyte, Sialic Acid, Glycoprotein, Fiber Head, Adenovirus, Fibre Head, Lipoprotein, Fiber Protein, Cell Junction, Cell Adhesion, Red Blood Cell, Coxsackievirus, Phosphoprotein, Membrane, Secreted, Receptor, Palmitate, Domain D1, Host-Virus Interaction, Virus-Receptor Complex, Transmembrane, Cell Membrane, Sialyl-Lactose, Tight Junction, Phosphorylation, Hemagglutination (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Seiradake, D. Henaff, H. Wodrich, O. Billet, M. Perreau, C. Hippert F. Mennechet, G. Schoehn, H. Lortat-Jacob, H. Dreja, S. Ibanes, V. Kalatzis, J. P. Wang, R. W. Finberg, S. Cusack, E. J. Kremer
The Cell Adhesion Molecule "Car" And Sialic Acid On Human Erythrocytes Influence Adenovirus In Vivo Biodistribution.
Plos Pathog. V. 5 277 2009
PubMed-ID: 19119424  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1000277

(-) Compounds

Molecule 1 - COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR
    Chains: A, B, G, J, K, O, P, T, V, X, Y, Z
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: XL1 BLUE
    Expression System Taxid: 511693
    Fragment: DOMAIN D1, RESIDUES 16-139
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: COXSACKIEVIRUS B-ADENOVIRUS RECEPTOR, HCVADR, HCAR, CVB3- BINDING PROTEIN
 
Molecule 2 - FIBRE PROTEIN
    Chains: C, D, E, F, H, I, L, M, N, Q, R, S
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21 STAR
    Expression System Taxid: 511693
    Fragment: FIBRE HEAD, RESIDUES 358-542
    Organism Scientific: CANINE ADENOVIRUS 2
    Organism Taxid: 10514
    Synonym: CANINE ADENOVIRUS FIBRE HEAD, PIV

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQRSTVXYZ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 24)

Asymmetric/Biological Unit (3, 24)
No.NameCountTypeFull Name
1GAL5Ligand/IonBETA-D-GALACTOSE
2GL07Ligand/IonBETA-D-GULOPYRANOSE
3SIA12Ligand/IonO-SIALIC ACID

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN C:378 , TYR C:408 , GLN C:415 , SER C:416 , GLN C:417 , SER C:419 , ASN C:435 , ARG C:515BINDING SITE FOR CHAIN C OF POLYSACCHARIDE RESIDUES 1543 TO 1544
02AC2SOFTWAREASN D:378 , TYR D:408 , GLN D:415 , SER D:416 , GLN D:417 , PHE D:418 , SER D:419 , ASN D:435 , ARG D:515BINDING SITE FOR CHAIN D OF POLYSACCHARIDE RESIDUES 1543 TO 1544
03AC3SOFTWAREASN E:378 , TYR E:408 , SER E:416 , GLN E:417 , PHE E:418 , SER E:419 , ASN E:435 , ARG E:515BINDING SITE FOR CHAIN E OF POLYSACCHARIDE RESIDUES 1543 TO 1544
04AC4SOFTWAREASN F:378 , TYR F:408 , GLN F:415 , SER F:416 , GLN F:417 , PHE F:418 , SER F:419 , ASN F:435 , ARG F:515BINDING SITE FOR CHAIN F OF POLYSACCHARIDE RESIDUES 1543 TO 1544
05AC5SOFTWAREILE H:377 , TYR H:408 , SER H:416 , GLN H:417 , PHE H:418 , SER H:419 , ASN H:435 , ARG H:515BINDING SITE FOR CHAIN H OF POLYSACCHARIDE RESIDUES 1543 TO 1544
06AC6SOFTWAREILE I:377 , ASN I:378 , TYR I:408 , SER I:416 , GLN I:417 , SER I:419 , ASN I:435 , ARG I:515 , HOH I:708BINDING SITE FOR CHAIN I OF POLYSACCHARIDE RESIDUES 1543 TO 1544
07AC7SOFTWAREASN L:378 , TYR L:408 , SER L:416 , GLN L:417 , PHE L:418 , SER L:419 , ASN L:435 , ARG L:515BINDING SITE FOR CHAIN L OF POLYSACCHARIDE RESIDUES 1543 TO 1544
08AC8SOFTWARETYR M:408 , GLN M:415 , SER M:416 , GLN M:417 , PHE M:418 , SER M:419 , ASN M:435 , ARG M:515BINDING SITE FOR CHAIN M OF POLYSACCHARIDE RESIDUES 1543 TO 1544
09AC9SOFTWAREASN C:520 , TYR N:408 , SER N:416 , GLN N:417 , SER N:419 , ASN N:435 , ARG N:515BINDING SITE FOR CHAIN N OF POLYSACCHARIDE RESIDUES 1543 TO 1544
10BC1SOFTWAREASN Q:378 , TYR Q:408 , GLN Q:415 , SER Q:416 , GLN Q:417 , SER Q:419 , ASN Q:435 , ARG Q:515BINDING SITE FOR CHAIN Q OF POLYSACCHARIDE RESIDUES 1543 TO 1544
11BC2SOFTWAREASN R:378 , TYR R:408 , SER R:416 , GLN R:417 , PHE R:418 , SER R:419 , ASN R:435 , ARG R:515BINDING SITE FOR CHAIN R OF POLYSACCHARIDE RESIDUES 1543 TO 1544
12BC3SOFTWAREASN S:378 , TYR S:408 , SER S:416 , GLN S:417 , PHE S:418 , SER S:419 , ASN S:435 , ARG S:515BINDING SITE FOR CHAIN S OF RESIDUES SIA S1543 AND GL0 S1544

(-) SS Bonds  (12, 12)

Asymmetric/Biological Unit
No.Residues
1A:41 -A:120
2B:41 -B:120
3G:41 -G:120
4J:41 -J:120
5K:41 -K:120
6O:41 -O:120
7P:41 -P:120
8T:41 -T:120
9V:41 -V:120
10X:41 -X:120
11Y:41 -Y:120
12Z:41 -Z:120

(-) Cis Peptide Bonds  (12, 12)

Asymmetric/Biological Unit
No.Residues
1Ala A:125 -Pro A:126
2Ala B:125 -Pro B:126
3Ala G:125 -Pro G:126
4Ala J:125 -Pro J:126
5Ala K:125 -Pro K:126
6Ala O:125 -Pro O:126
7Ala P:125 -Pro P:126
8Ala T:125 -Pro T:126
9Ala V:125 -Pro V:126
10Ala X:125 -Pro X:126
11Ala Y:125 -Pro Y:126
12Ala Z:125 -Pro Z:126

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2W9L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2W9L)

(-) Exons   (3, 29)

Asymmetric/Biological Unit (3, 29)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000002848781aENSE00001356018chr21:18884700-18885490791CXAR_HUMAN1-15150--
1.4bENST000002848784bENSE00001370254chr21:18919345-18919511167CXAR_HUMAN15-705612A:19-70
B:20-70
G:17-70
J:17-70
K:16-70
O:19-70 (gaps)
P:17-70
T:19-70
V:17-70
X:17-70
Y:19-70
Z:19-70		52
51
54
54
55
52
54
52
54
54
52
52
1.5ENST000002848785ENSE00001016957chr21:18924067-18924271205CXAR_HUMAN71-1396912A:71-135
B:71-136
G:71-139
J:71-139
K:71-138
O:71-139
P:71-139
T:71-137
V:71-137
X:71-139
Y:71-137
Z:71-135		65
66
69
69
68
69
69
67
67
69
67
65
1.6ENST000002848786ENSE00001016954chr21:18931294-18931449156CXAR_HUMAN139-191535-
-
G:139-139
J:139-139
-
O:139-139
P:139-139
-
-
X:139-139
-
-		-
-
1
1
-
1
1
-
-
1
-
-
1.7ENST000002848787ENSE00001016953chr21:18933020-18933142123CXAR_HUMAN191-232420--
1.8ENST000002848788ENSE00001016956chr21:18933656-18933794139CXAR_HUMAN232-278470--
1.9fENST000002848789fENSE00001918181chr21:18937746-189424184673CXAR_HUMAN278-365880--

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:117
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:117
                                    28        38        48        58        68        78        88        98       108       118       128       
           CXAR_HUMAN    19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHL 135
               SCOP domains d2w9la_ A: Coxsackie virus and adenovirus receptor (Car), domain 1                                                    SCOP domains
               CATH domains 2w9lA00 A:19-135 Immunoglobulins                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee...eee........eee...ee.........eeeeeeee.......eeeeeee...ee...hhhhh..eee...........eee...hhhh.eeeeeeeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: A:19-70 UniProt: 15-70 [INCOMPLETE] Exon 1.5  PDB: A:71-135 UniProt: 71-139 [INCOMPLETE]              Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2w9l A  19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHL 135
                                    28        38        48        58        68        78        88        98       108       118       128       


Chain B from PDB  Type:PROTEIN  Length:117
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:117
                                    29        39        49        59        69        79        89        99       109       119       129       
           CXAR_HUMAN    20 LSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLV 136
               SCOP domains d2w9lb_ B: Coxsackie virus and adenovirus receptor (Car), domain 1                                                    SCOP domains
               CATH domains 2w9lB00 B:20-136 Immunoglobulins                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...eeee........ee...ee.........eeeeeeee.......eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: B:20-70 UniProt: 15-70 [INCOMPLETE]Exon 1.5  PDB: B:71-136 UniProt: 71-139 [INCOMPLETE]               Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2w9l B  20 LSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLV 136
                                    29        39        49        59        69        79        89        99       109       119       129       


Chain C from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9lc_ C: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l C 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain D from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9ld_ D: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l D 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain E from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9le_ E: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l E 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain F from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9lf_ F: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l F 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain G from PDB  Type:PROTEIN  Length:123
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:123
                                    26        36        46        56        66        76        86        96       106       116       126       136   
           CXAR_HUMAN    17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
               SCOP domains d2w9lg_ G: Coxsackie virus and adenovirus receptor (Car), domain 1                                                          SCOP domains
               CATH domains 2w9lG00 G:17-139 Immunoglobulins                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee...eeeeeee....eee...ee.........eeeeeeee.......eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: G:17-70 UniProt: 15-70 [INCOMPLETE]   Exon 1.5  PDB: G:71-139 UniProt: 71-139                               Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------1 Transcript 1 (2)
                 2w9l G  17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
                                    26        36        46        56        66        76        86        96       106       116       126       136   


Chain H from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9lh_ H: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee........ee....eeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l H 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain I from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9li_ I: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeee....eeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l I 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain J from PDB  Type:PROTEIN  Length:123
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:123
                                    26        36        46        56        66        76        86        96       106       116       126       136   
           CXAR_HUMAN    17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
               SCOP domains d2w9lj_ J: Coxsackie virus and adenovirus receptor (Car), domain 1                                                          SCOP domains
               CATH domains 2w9lJ00 J:17-139 Immunoglobulins                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee...eeeeeee....eee...ee.........eeeeeeee.......eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: J:17-70 UniProt: 15-70 [INCOMPLETE]   Exon 1.5  PDB: J:71-139 UniProt: 71-139                               Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------1 Transcript 1 (2)
                 2w9l J  17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
                                    26        36        46        56        66        76        86        96       106       116       126       136   


Chain K from PDB  Type:PROTEIN  Length:123
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:123
                                    25        35        45        55        65        75        85        95       105       115       125       135   
           CXAR_HUMAN    16 FARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVL 138
               SCOP domains d2w9lk_ K: Coxsackie virus and adenovirus receptor (Car), domain 1                                                          SCOP domains
               CATH domains 2w9lK00 K:16-138 Immunoglobulins                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....ee...eeeeeee....eee...ee.........eeeeeeee.......eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: K:16-70 UniProt: 15-70 [INCOMPLETE]    Exon 1.5  PDB: K:71-138 UniProt: 71-139 [INCOMPLETE]                 Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2w9l K  16 FARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVL 138
                                    25        35        45        55        65        75        85        95       105       115       125       135   


Chain L from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9ll_ L: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeee....eeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l L 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain M from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9lm_ M: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l M 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain N from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9ln_ N: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l N 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain O from PDB  Type:PROTEIN  Length:118
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:121
                                    28        38        48        58        68        78        88        98       108       118       128       138 
           CXAR_HUMAN    19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
               SCOP domains d2w9lo_ O: Coxsackie virus and adenovirus rec   eptor (Car), domain 1                                                     SCOP domains
               CATH domains 2w9lO00 O:19-139 Immunoglobulins                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee...eeeeeee....eee...ee.........eeeeeeee..---..eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: O:19-70 (gaps) UniProt: 15-70       Exon 1.5  PDB: O:71-139 UniProt: 71-139                               Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------1 Transcript 1 (2)
                 2w9l O  19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPAD---VDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
                                    28        38        48        58    |   68        78        88        98       108       118       128       138 
                                                                       63  67                                                                        


Chain P from PDB  Type:PROTEIN  Length:123
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:123
                                    26        36        46        56        66        76        86        96       106       116       126       136   
           CXAR_HUMAN    17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
               SCOP domains d2w9lp_ P: Coxsackie virus and adenovirus receptor (Car), domain 1                                                          SCOP domains
               CATH domains 2w9lP00 P:17-139 Immunoglobulins                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee...eeeeeee....eee...ee........eeeeeeeee.......eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: P:17-70 UniProt: 15-70 [INCOMPLETE]   Exon 1.5  PDB: P:71-139 UniProt: 71-139                               Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------1 Transcript 1 (2)
                 2w9l P  17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
                                    26        36        46        56        66        76        86        96       106       116       126       136   


Chain Q from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9lq_ Q: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeee....eeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l Q 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain R from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9lr_ R: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l R 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain S from PDB  Type:PROTEIN  Length:182
 aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:182
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  
          SPIKE_ADECT   361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
               SCOP domains d2w9ls_ S: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee........ee....eeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w9l S 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  


Chain T from PDB  Type:PROTEIN  Length:119
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:119
                                    28        38        48        58        68        78        88        98       108       118       128         
           CXAR_HUMAN    19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 137
               SCOP domains d2w9lt_ T: Coxsackie virus and adenovirus receptor (Car), domain 1                                                      SCOP domains
               CATH domains 2w9lT00 T:19-137 Immunoglobulins                                                                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee...eeeee......eee...ee.........eeeeeeee.......eeeeeee..eeee..hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: T:19-70 UniProt: 15-70 [INCOMPLETE] Exon 1.5  PDB: T:71-137 UniProt: 71-139 [INCOMPLETE]                Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2w9l T  19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 137
                                    28        38        48        58        68        78        88        98       108       118       128         


Chain V from PDB  Type:PROTEIN  Length:121
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:121
                                    26        36        46        56        66        76        86        96       106       116       126       136 
           CXAR_HUMAN    17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 137
               SCOP domains d2w9lv_ V: Coxsackie virus and adenovirus receptor (Car), domain 1                                                        SCOP domains
               CATH domains 2w9lV00 V:17-137 Immunoglobulins                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee...ee.........eee...ee.........eeeeeeee.......eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: V:17-70 UniProt: 15-70 [INCOMPLETE]   Exon 1.5  PDB: V:71-137 UniProt: 71-139 [INCOMPLETE]                Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2w9l V  17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 137
                                    26        36        46        56        66        76        86        96       106       116       126       136 


Chain X from PDB  Type:PROTEIN  Length:123
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:123
                                    26        36        46        56        66        76        86        96       106       116       126       136   
           CXAR_HUMAN    17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
               SCOP domains d2w9lx_ X: Coxsackie virus and adenovirus receptor (Car), domain 1                                                          SCOP domains
               CATH domains 2w9lX00 X:17-139 Immunoglobulins                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee...eeeeeee....eee...ee.........eeeeeeee.......eeeeeee..eeee..hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: X:17-70 UniProt: 15-70 [INCOMPLETE]   Exon 1.5  PDB: X:71-139 UniProt: 71-139                               Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------1 Transcript 1 (2)
                 2w9l X  17 ARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 139
                                    26        36        46        56        66        76        86        96       106       116       126       136   


Chain Y from PDB  Type:PROTEIN  Length:119
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:119
                                    28        38        48        58        68        78        88        98       108       118       128         
           CXAR_HUMAN    19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 137
               SCOP domains d2w9ly_ Y: Coxsackie virus and adenovirus receptor (Car), domain 1                                                      SCOP domains
               CATH domains 2w9lY00 Y:19-137 Immunoglobulins                                                                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee...eeeee......eee...ee.........eeeeeeee.......eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: Y:19-70 UniProt: 15-70 [INCOMPLETE] Exon 1.5  PDB: Y:71-137 UniProt: 71-139 [INCOMPLETE]                Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2w9l Y  19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 137
                                    28        38        48        58        68        78        88        98       108       118       128         


Chain Z from PDB  Type:PROTEIN  Length:117
 aligned with CXAR_HUMAN | P78310 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:117
                                    28        38        48        58        68        78        88        98       108       118       128       
           CXAR_HUMAN    19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHL 135
               SCOP domains d2w9lz_ Z: Coxsackie virus and adenovirus receptor (Car), domain 1                                                    SCOP domains
               CATH domains 2w9lZ00 Z:19-135 Immunoglobulins                                                                                      CATH domains
           Pfam domains (1) V-set-2w9lZ01 Z:19-135                                                                                                Pfam domains (1)
           Pfam domains (2) V-set-2w9lZ02 Z:19-135                                                                                                Pfam domains (2)
           Pfam domains (3) V-set-2w9lZ03 Z:19-135                                                                                                Pfam domains (3)
           Pfam domains (4) V-set-2w9lZ04 Z:19-135                                                                                                Pfam domains (4)
           Pfam domains (5) V-set-2w9lZ05 Z:19-135                                                                                                Pfam domains (5)
           Pfam domains (6) V-set-2w9lZ06 Z:19-135                                                                                                Pfam domains (6)
           Pfam domains (7) V-set-2w9lZ07 Z:19-135                                                                                                Pfam domains (7)
           Pfam domains (8) V-set-2w9lZ08 Z:19-135                                                                                                Pfam domains (8)
           Pfam domains (9) V-set-2w9lZ09 Z:19-135                                                                                                Pfam domains (9)
          Pfam domains (10) V-set-2w9lZ10 Z:19-135                                                                                                Pfam domains (10)
          Pfam domains (11) V-set-2w9lZ11 Z:19-135                                                                                                Pfam domains (11)
          Pfam domains (12) V-set-2w9lZ12 Z:19-135                                                                                                Pfam domains (12)
         Sec.struct. author ..ee...eee........eee...ee.........eeeeeeee.......eeeeeee..eee...hhhhh..eee...hhhhh...eee...hhhh.eeeeeeeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4b  PDB: Z:19-70 UniProt: 15-70 [INCOMPLETE] Exon 1.5  PDB: Z:71-135 UniProt: 71-139 [INCOMPLETE]              Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2w9l Z  19 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHL 135
                                    28        38        48        58        68        78        88        98       108       118       128
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 24)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 12)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)
(-)
Architecture: Sandwich (5577)
(-)
Topology: Immunoglobulin-like (3897)
(-)
Homologous Superfamily: Immunoglobulins (2282)
(-)
Canine adenovirus 2. Organism_taxid: 10514. (2)
1a2w9lA00A:19-135
1b2w9lB00B:20-136
1c2w9lZ00Z:19-135
1d2w9lO00O:19-139
1e2w9lT00T:19-137
1f2w9lY00Y:19-137
1g2w9lV00V:17-137
1h2w9lG00G:17-139
1i2w9lJ00J:17-139
1j2w9lK00K:16-138
1k2w9lP00P:17-139
1l2w9lX00X:17-139

(-) Pfam Domains  (1, 12)

Asymmetric/Biological Unit
(-)
Clan: Ig (577)
(-)
Family: V-set (144)
(-)
Homo sapiens (Human) (61)
1aV-set-2w9lZ01Z:19-135
1bV-set-2w9lZ02Z:19-135
1cV-set-2w9lZ03Z:19-135
1dV-set-2w9lZ04Z:19-135
1eV-set-2w9lZ05Z:19-135
1fV-set-2w9lZ06Z:19-135
1gV-set-2w9lZ07Z:19-135
1hV-set-2w9lZ08Z:19-135
1iV-set-2w9lZ09Z:19-135
1jV-set-2w9lZ10Z:19-135
1kV-set-2w9lZ11Z:19-135
1lV-set-2w9lZ12Z:19-135

(-) Gene Ontology  (58, 61)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,G,J,K,O,P,T,V,X,Y,Z   (CXAR_HUMAN | P78310)
molecular function
    GO:0030165    PDZ domain binding    Interacting selectively and non-covalently with a PDZ domain of a protein, a domain found in diverse signaling proteins.
    GO:0008013    beta-catenin binding    Interacting selectively and non-covalently with the beta subunit of the catenin complex.
    GO:0050839    cell adhesion molecule binding    Interacting selectively and non-covalently with a cell adhesion molecule.
    GO:0071253    connexin binding    Interacting selectively and non-covalently with a connexin, any of a group of related proteins that assemble to form gap junctions.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0005178    integrin binding    Interacting selectively and non-covalently with an integrin.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0005102    receptor binding    Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
    GO:0001618    virus receptor activity    Combining with a virus component and mediating entry of the virus into the cell.
biological process
    GO:0086067    AV node cell to bundle of His cell communication    The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
    GO:0031532    actin cytoskeleton reorganization    A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.
    GO:0048739    cardiac muscle fiber development    The process whose specific outcome is the progression of cardiac muscle fiber over time, from its formation to the mature structure.
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0045216    cell-cell junction organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells.
    GO:0051607    defense response to virus    Reactions triggered in response to the presence of a virus that act to protect the cell or organism.
    GO:0010669    epithelial structure maintenance    A tissue homeostatic process required for the maintenance of epithelial structure.
    GO:0046629    gamma-delta T cell activation    The change in morphology and behavior of a gamma-delta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
    GO:0008354    germ cell migration    The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.
    GO:0007507    heart development    The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
    GO:0007157    heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules    The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell.
    GO:0034109    homotypic cell-cell adhesion    The attachment of a cell to a second cell of the identical type via adhesion molecules.
    GO:0050900    leukocyte migration    The movement of a leukocyte within or between different tissues and organs of the body.
    GO:0007005    mitochondrion organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components.
    GO:0030593    neutrophil chemotaxis    The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.
    GO:0050776    regulation of immune response    Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.
    GO:0070633    transepithelial transport    The directed movement of a substance from one side of an epithelium to the other.
    GO:0046718    viral entry into host cell    The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
    GO:0016032    viral process    A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
cellular component
    GO:0001669    acrosomal vesicle    A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome.
    GO:0005912    adherens junction    A cell junction at which anchoring proteins (cadherins or integrins) extend through the plasma membrane and are attached to actin filaments.
    GO:0016327    apicolateral plasma membrane    The apical end of the lateral plasma membrane of epithelial cells.
    GO:0016323    basolateral plasma membrane    The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.
    GO:0005923    bicellular tight junction    An occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet; the outer leaflets of the two interacting plasma membranes are seen to be tightly apposed where sealing strands are present. Each sealing strand is composed of a long row of transmembrane adhesion proteins embedded in each of the two interacting plasma membranes.
    GO:0044297    cell body    The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0005911    cell-cell junction    A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0030175    filopodium    Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.
    GO:0030426    growth cone    The migrating motile tip of a growing nerve cell axon or dendrite.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0014704    intercalated disc    A complex cell-cell junction at which myofibrils terminate in cardiomyocytes; mediates mechanical and electrochemical integration between individual cardiomyocytes. The intercalated disc contains regions of tight mechanical attachment (fasciae adherentes and desmosomes) and electrical coupling (gap junctions) between adjacent cells.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0045121    membrane raft    Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
    GO:0031594    neuromuscular junction    The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043234    protein complex    A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.

Chain C,D,E,F,H,I,L,M,N,Q,R,S   (SPIKE_ADECT | Q65914)
biological process
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
    GO:0046718    viral entry into host cell    The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
    GO:0019058    viral life cycle    A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
    GO:0016032    viral process    A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
    GO:0019062    virion attachment to host cell    The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.
cellular component
    GO:0042025    host cell nucleus    A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0019028    viral capsid    The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.

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  2w9l
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  CXAR_HUMAN | P78310
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  SPIKE_ADECT | Q65914
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CXAR_HUMAN | P78310: 1eaj 1f5w 1jew 1kac 1p69 1p6a 1rsf 2j12 2j1k 2npl 2wbw 3j6l 3j6m 3j6n 3j6o
        SPIKE_ADECT | Q65914: 2j1k 2j2j 2wbv

(-) Related Entries Specified in the PDB File

1eaj DIMERIC STRUCTURE OF THE COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR D1 DOMAIN AT 1.35 ANGSTROM RESOLUTION
1f5w DIMERIC STRUCTURE OF THE COXSACKIE VIRUS AND ADENOVIRUSRECEPTOR D1 DOMAIN
1jew CYRO-EM STRUCTURE OF COXSACKIEVIRUS B3(M STRAIN) WITH ITSCELLULAR RECEPTOR, COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR(CAR).
1kac KNOB DOMAIN FROM ADENOVIRUS SEROTYPE 12 IN COMPLEX WITH DOMAIN 1 OF ITS CELLULAR RECEPTOR CAR
1p69 STRUCTURAL BASIS FOR VARIATION IN ADENOVIRUS AFFINITY FORTHE CELLULAR RECEPTOR CAR (P417S MUTANT)
1p6a STRUCTURAL BASIS FOR VARIATION IN ASDENOVIRUS AFFINITY FORTHE CELLULAR RECEPTOR CAR (S489Y MUTANT)
1rsf NMR STRUCTURE OF MONOMERIC CAR D1 DOMAIN
2j12 AD37 FIBRE HEAD IN COMPLEX WITH CAR D1
2j1k CAV-2 FIBRE HEAD IN COMPLEX WITH CAR D1
2j2j CANINE ADENOVIRUS FIBRE HEAD AT 1.5 A RESOLUTION