Chain A from PDB Type:PROTEIN Length:182
aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot Length:542
Alignment length:182
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
SPIKE_ADECT 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
SCOP domains d2j2ja_ A: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j2j A 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
Chain B from PDB Type:PROTEIN Length:182
aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot Length:542
Alignment length:182
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
SPIKE_ADECT 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
SCOP domains d2j2jb_ B: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee......eeeee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j2j B 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
Chain C from PDB Type:PROTEIN Length:182
aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot Length:542
Alignment length:182
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
SPIKE_ADECT 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
SCOP domains d2j2jc_ C: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j2j C 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
Chain D from PDB Type:PROTEIN Length:182
aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot Length:542
Alignment length:182
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
SPIKE_ADECT 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
SCOP domains d2j2jd_ D: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j2j D 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
Chain E from PDB Type:PROTEIN Length:182
aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot Length:542
Alignment length:182
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
SPIKE_ADECT 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
SCOP domains d2j2je_ E: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j2j E 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
Chain F from PDB Type:PROTEIN Length:182
aligned with SPIKE_ADECT | Q65914 from UniProtKB/Swiss-Prot Length:542
Alignment length:182
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
SPIKE_ADECT 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
SCOP domains d2j2jf_ F: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee........eee..eeeeeeeeeeee...eeeeeeeeee.hhh.ee......eeeeeee..................ee............hhhhhhhh.........eeeeeeee........hhh.eeeeeeee........eeeeeeeehhhhh...ee.....eeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2j2j F 361 APITLWTGPGPSINGFINDTPVIRCFICLTRDSNLVTVNASFVGEGGYRIVSPTQSQFSLIMEFDQFGQLMSTGNINSTTTWGEKPWGNNTVQPRPSHTWKLCMPNREVYSTPAATISRCGLDSIAVDGAPSRSIDCMLIINKPKGVATYTLTFRFLNFNRLSGGTLFKTDVLTFTYVGENQ 542
370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |