2VZD - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA PARVIN IN COMPLEX WITH PAXILLIN LD1 MOTIF

Authors :   S. Lorenz, I. Vakonakis, E. D. Lowe, I. D. Campbell, M. E. M. Noble, M. K. H

Date :   31 Jul 08 (Deposition) - 28 Oct 08 (Release) - 30 May 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,C  (1x)
Biol. Unit 2: B,D  (1x)

Keywords :   Calponin Homology Domain, Cell Membrane, Cell Adhesion, Metal-Binding, Cytoskeleton, Cell Junction, Actin-Binding, Phosphoprotein, Membrane, Ld1 Motif, Lim Domain (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Lorenz, I. Vakonakis, E. D. Lowe, I. D. Campbell, M. E. M. Noble, M. K. Hoellerer
Structural Analysis Of The Interactions Between Paxillin Ld Motifs And Alpha-Parvin
Structure V. 16 1521 2008
PubMed-ID: 18940607 | Reference-DOI: 10.1016/J.STR.2008.08.007

Molecule 1 - ALPHA-PARVIN
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PGEX-6P1
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Fragment	:	C-TERMINAL CALPONIN HOMOLOGY DOMAIN, RESIDUES 242-372
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	CALPONIN-LIKE INTEGRIN-LINKED KINASE-BINDING PROTEIN, CH-ILKBP, MATRIX-REMODELING-ASSOCIATED PROTEIN 2, ACTOPAXIN

Molecule 2 - PAXILLIN
	Chains	:	C, D
	Engineered	:	YES
	Fragment	:	PAXILLIN LD1 MOTIF, RESIDUES 1-20
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synthetic	:	YES

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A		C
Biological Unit 2 (1x)	:		B		D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 14)

No.	Name	Count	Type	Full Name
1	EDO	7	Ligand/Ion	1,2-ETHANEDIOL
2	GOL	3	Ligand/Ion	GLYCEROL
3	PG4	2	Ligand/Ion	TETRAETHYLENE GLYCOL
4	PGE	2	Ligand/Ion	TRIETHYLENE GLYCOL

Biological Unit 1 (4, 7)

No.	Name	Count	Type	Full Name
1	EDO	2	Ligand/Ion	1,2-ETHANEDIOL
2	GOL	2	Ligand/Ion	GLYCEROL
3	PG4	1	Ligand/Ion	TETRAETHYLENE GLYCOL
4	PGE	2	Ligand/Ion	TRIETHYLENE GLYCOL

Biological Unit 2 (3, 7)

No.	Name	Count	Type	Full Name
1	EDO	5	Ligand/Ion	1,2-ETHANEDIOL
2	GOL	1	Ligand/Ion	GLYCEROL
3	PG4	1	Ligand/Ion	TETRAETHYLENE GLYCOL
4	PGE	-1	Ligand/Ion	TRIETHYLENE GLYCOL

Asymmetric Unit (14, 14)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP B:348 , ASP B:353 , HOH D:2001	BINDING SITE FOR RESIDUE EDO D1015
02	AC2	SOFTWARE	HIS A:311 , PHE A:313 , PHE A:314 , LEU A:315 , LEU A:325	BINDING SITE FOR RESIDUE PGE A1373
03	AC3	SOFTWARE	PHE A:254 , LEU A:261 , PHE A:320 , GLU A:321 , GLU A:347 , ASN A:351 , ASP A:353 , LEU A:354 , LYS A:355 , PGE A:1375 , GOL A:1377	BINDING SITE FOR RESIDUE PG4 A1374
04	AC4	SOFTWARE	ARG A:345 , ASP A:348 , PG4 A:1374	BINDING SITE FOR RESIDUE PGE A1375
05	AC5	SOFTWARE	TYR A:306 , PHE A:307	BINDING SITE FOR RESIDUE GOL A1376
06	AC6	SOFTWARE	ARG A:345 , GLU A:347 , CYS A:352 , ASP A:353 , LEU A:354 , PG4 A:1374	BINDING SITE FOR RESIDUE GOL A1377
07	AC7	SOFTWARE	LEU B:310 , HIS B:311 , PHE B:313 , PHE B:314 , LEU B:315 , PHE B:320 , GLU B:321 , EDO B:1378 , HOH B:2038	BINDING SITE FOR RESIDUE PG4 B1373
08	AC8	SOFTWARE	LEU B:279	BINDING SITE FOR RESIDUE GOL B1374
09	AC9	SOFTWARE	SER B:328 , PHE B:329 , GLU B:332 , ARG B:345 , GLU B:347 , EDO B:1378	BINDING SITE FOR RESIDUE EDO B1375
10	BC1	SOFTWARE	GLN A:289 , ASP A:292 , TYR A:295	BINDING SITE FOR RESIDUE EDO A1378
11	BC2	SOFTWARE	LEU A:298 , TYR A:306 , VAL B:308	BINDING SITE FOR RESIDUE EDO A1379
12	BC3	SOFTWARE	ASP B:292 , TYR B:295	BINDING SITE FOR RESIDUE EDO B1376
13	BC4	SOFTWARE	THR B:288 , LYS B:323	BINDING SITE FOR RESIDUE EDO B1377
14	BC5	SOFTWARE	HIS B:311 , SER B:312 , GLU B:347 , PG4 B:1373 , EDO B:1375	BINDING SITE FOR RESIDUE EDO B1378

(no "SS Bond" information available for 2VZD)

(no "Cis Peptide Bond" information available for 2VZD)

(no "SAP(SNP)/Variant" information available for 2VZD)

Asymmetric Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CH	PS50021	Calponin homology domain profile.	PARVA_HUMAN	95-201 262-369	2	- A:262-369 B:262-369

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CH	PS50021	Calponin homology domain profile.	PARVA_HUMAN	95-201 262-369	1	- A:262-369 -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CH	PS50021	Calponin homology domain profile.	PARVA_HUMAN	95-201 262-369	1	- - B:262-369

Asymmetric Unit (2, 4)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000228307	1	ENSE00002150335	chr12:120703563-120703420	144	PAXI_HUMAN	1-5	5	2	C:2-5 D:1-5	4 5
1.4b	ENST00000228307	4b	ENSE00001689444	chr12:120662180-120661954	227	PAXI_HUMAN	5-80	76	2	C:5-13 D:5-14	9 10
1.5b	ENST00000228307	5b	ENSE00001679472	chr12:120661636-120661521	116	PAXI_HUMAN	81-119	39	0	-	-
1.6	ENST00000228307	6	ENSE00001768793	chr12:120660802-120660666	137	PAXI_HUMAN	119-165	47	0	-	-
1.7	ENST00000228307	7	ENSE00001668346	chr12:120660553-120660352	202	PAXI_HUMAN	165-232	68	0	-	-
1.8	ENST00000228307	8	ENSE00001756096	chr12:120659561-120659426	136	PAXI_HUMAN	232-277	46	0	-	-
1.12	ENST00000228307	12	ENSE00001729387	chr12:120653464-120653363	102	PAXI_HUMAN	278-311	34	0	-	-
1.13b	ENST00000228307	13b	ENSE00001653040	chr12:120653076-120652906	171	PAXI_HUMAN	312-368	57	0	-	-
1.14	ENST00000228307	14	ENSE00001670431	chr12:120652801-120652628	174	PAXI_HUMAN	369-426	58	0	-	-
1.15	ENST00000228307	15	ENSE00001798560	chr12:120652020-120651939	82	PAXI_HUMAN	427-454	28	0	-	-
1.16	ENST00000228307	16	ENSE00001667198	chr12:120651793-120651645	149	PAXI_HUMAN	454-503	50	0	-	-
1.17c	ENST00000228307	17c	ENSE00001473236	chr12:120650383-120648251	2133	PAXI_HUMAN	504-591	88	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:127
 aligned with PARVA_HUMAN | Q9NVD7 from UniProtKB/Swiss-Prot  Length:372

    Alignment length:127
                                   255       265       275       285       295       305       315       325       335       345       355       365       
          PARVA_HUMAN   246 ERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 372
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh...hhhhh.....hhhhhhhhhhhhhhhhhhhh......hhhhhhh.hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------CH  PDB: A:262-369 UniProt: 262-369                                                                         --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vzd A 246 ERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 372
                                   255       265       275       285       295       305       315       325       335       345       355       365

Chain B from PDB  Type:PROTEIN  Length:126
 aligned with PARVA_HUMAN | Q9NVD7 from UniProtKB/Swiss-Prot  Length:372

    Alignment length:126
                                   256       266       276       286       296       306       316       326       336       346       356       366      
          PARVA_HUMAN   247 RDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 372
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh...hhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------CH  PDB: B:262-369 UniProt: 262-369                                                                         --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2vzd B 247 RDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 372
                                   256       266       276       286       296       306       316       326       336       346       356       366

Chain C from PDB  Type:PROTEIN  Length:12
 aligned with PAXI_HUMAN | P49023 from UniProtKB/Swiss-Prot  Length:591

    Alignment length:12
                                    11  
           PAXI_HUMAN     2 DDLDALLADLES  13
               SCOP domains ------------ SCOP domains
               CATH domains ------------ CATH domains
               Pfam domains ------------ Pfam domains
         Sec.struct. author hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------ SAPs(SNPs)
                    PROSITE ------------ PROSITE
           Transcript 1 (1) 1.1 -------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.4b Transcript 1 (2)
                 2vzd C   2 DDLDALLADLES  13
                                    11

Chain D from PDB  Type:PROTEIN  Length:14
 aligned with PAXI_HUMAN | P49023 from UniProtKB/Swiss-Prot  Length:591

    Alignment length:14
                                    10    
           PAXI_HUMAN     1 MDDLDALLADLEST  14
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains -------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -------------- PROSITE
           Transcript 1 (1) 1.1  --------- Transcript 1 (1)
           Transcript 1 (2) ----Exon 1.4b  Transcript 1 (2)
                 2vzd D   1 MDDLDALLADLEST  14
                                    10

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2VZD)

(no "CATH Domain" information available for 2VZD)

(no "Pfam Domain" information available for 2VZD)

Asymmetric Unit(hide GO term definitions)

Chain A,B (PARVA_HUMAN | Q9NVD7)

molecular function
	GO:0003779	actin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0031532	actin cytoskeleton reorganization	A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.
	GO:0070252	actin-mediated cell contraction	The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of all or part of the cell body.
	GO:0001525	angiogenesis	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
	GO:0007155	cell adhesion	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
	GO:0030030	cell projection organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.
	GO:0006935	chemotaxis	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
	GO:0060271	cilium assembly	The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.
	GO:0007163	establishment or maintenance of cell polarity	Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.
	GO:0034113	heterotypic cell-cell adhesion	The attachment of a cell to a cell of a different type via adhesion molecules.
	GO:0003148	outflow tract septum morphogenesis	The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract.
	GO:0008360	regulation of cell shape	Any process that modulates the surface configuration of a cell.
	GO:0071670	smooth muscle cell chemotaxis	The directed movement of a smooth muscle cell in response to an external stimulus.
	GO:0002040	sprouting angiogenesis	The extension of new blood vessels from existing capillaries into avascular tissues resulting from the proliferation of blood vessel endothelial cells.
	GO:0034446	substrate adhesion-dependent cell spreading	The morphogenetic process that results in flattening of a cell as a consequence of its adhesion to a substrate.
cellular component
	GO:0030018	Z disc	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
	GO:0030054	cell junction	A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005925	focal adhesion	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain C,D (PAXI_HUMAN | P49023)

molecular function
	GO:0008013	beta-catenin binding	Interacting selectively and non-covalently with the beta subunit of the catenin complex.
	GO:0005178	integrin binding	Interacting selectively and non-covalently with an integrin.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0032403	protein complex binding	Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0019901	protein kinase binding	Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
	GO:0017166	vinculin binding	Interacting selectively and non-covalently with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0007155	cell adhesion	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
	GO:0007160	cell-matrix adhesion	The binding of a cell to the extracellular matrix via adhesion molecules.
	GO:0034614	cellular response to reactive oxygen species	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.
	GO:0007173	epidermal growth factor receptor signaling pathway	A series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor EGFR (ERBB1) on the surface of a cell. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
	GO:0060396	growth hormone receptor signaling pathway	The series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.
	GO:0006936	muscle contraction	A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis.
	GO:0007172	signal complex assembly	The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell.
	GO:0007165	signal transduction	The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
	GO:0007179	transforming growth factor beta receptor signaling pathway	A series of molecular signals initiated by the binding of an extracellular ligand to a transforming growth factor beta receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
	GO:0048010	vascular endothelial growth factor receptor signaling pathway	Any series of molecular signals initiated by the binding of an extracellular ligand to a vascular endothelial growth factor receptor (VEGFR) located on the surface of the receiving cell, and ending with regulation of a downstream cellular process, e.g. transcription.
cellular component
	GO:0005938	cell cortex	The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
	GO:0030054	cell junction	A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005925	focal adhesion	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
	GO:0030027	lamellipodium	A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
	GO:0005875	microtubule associated complex	Any multimeric complex connected to a microtubule.
	GO:0005654	nucleoplasm	That part of the nuclear content other than the chromosomes or the nucleolus.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0001725	stress fiber	A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.

Asymmetric Unit
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	Cis Peptide Bonds
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	2vzd
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	PARVA_HUMAN \| Q9NVD7
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	PAXI_HUMAN \| P49023
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		Protein-protein Interaction	:	DIP
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		Interatomic Contacts of Structural Units	:	CSU
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	PARVA_HUMAN \| Q9NVD7
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	PAXI_HUMAN \| P49023
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

1kky	THEORETICAL MODEL OF THE FAT DOMAIN OF FOCAL ADHESIONKINASE COMPLEXED WITH PAXILLIN LD2 MOTIF
1kl0	THEORETICAL MODEL OF THE FAT DOMAIN OF FOCAL ADHESIONKINASE COMPLEXED WITH PAXILLIN LD2 MOTIF
2vzc	CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA PARVIN
2vzg	CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA-PARVIN IN COMPLEX WITH PAXILLIN LD2 MOTIF
2vzi	CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA-PARVIN IN COMPLEX WITH PAXILLIN LD4 MOTIF

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 14)

Sites (14, 14)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (2, 4)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (45, 53)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File