Chain A from PDB Type:PROTEIN Length:116
aligned with Q9A6J2_CAUCR | Q9A6J2 from UniProtKB/TrEMBL Length:162
Alignment length:116
17 27 37 47 57 67 77 87 97 107 117
Q9A6J2_CAUCR 8 EDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 123
SCOP domains d2qaza_ A: automated matches SCOP domains
CATH domains 2qazA00 A:8-123 Stringent starvation protein B, SspB CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhh.........eeeeee........hhhhhhh...eeeeee...eeeeee...eeeeeeee..eeeeeeee...eeeeeehhhheeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
2qaz A 8 EDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 123
17 27 37 47 57 67 77 87 97 107 117
Chain B from PDB Type:PROTEIN Length:118
aligned with Q9A6J2_CAUCR | Q9A6J2 from UniProtKB/TrEMBL Length:162
Alignment length:118
15 25 35 45 55 65 75 85 95 105 115
Q9A6J2_CAUCR 6 PPEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 123
SCOP domains d2qazb_ B: automated matches SCOP domains
CATH domains 2qazB00 B:6-123 Stringent starvation protein B, SspB CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhh..........eeeeee........hhhhhhh...eeeeee...eeeeee...eeeeeeee..eeeeeeee...eeeeeehhhheeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
2qaz B 6 PPEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 123
15 25 35 45 55 65 75 85 95 105 115
Chain C from PDB Type:PROTEIN Length:118
aligned with Q9A6J2_CAUCR | Q9A6J2 from UniProtKB/TrEMBL Length:162
Alignment length:118
15 25 35 45 55 65 75 85 95 105 115
Q9A6J2_CAUCR 6 PPEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 123
SCOP domains d2qazc_ C: automated matches SCOP domains
CATH domains 2qazC00 C:6-123 Stringent starvation protein B, SspB CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhh.........eeeeee..........hhhhhh..eeeeee....eeeee...eeeeee......eeeeee...eeeeeehhhheeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
2qaz C 6 PPEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSA 123
15 25 35 45 55 65 75 85 95 105 115
Chain D from PDB Type:PROTEIN Length:112
aligned with Q9A6J2_CAUCR | Q9A6J2 from UniProtKB/TrEMBL Length:162
Alignment length:112
20 30 40 50 60 70 80 90 100 110 120
Q9A6J2_CAUCR 11 MQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFS 122
SCOP domains d2qazd_ D: automated matches SCOP domains
CATH domains 2qazD00 D:11-122 Stringent starvation protein B, SspB CATH domains
Pfam domains (1) SspB-2qazD01 D:11-122 Pfam domains (1)
Pfam domains (2) SspB-2qazD02 D:11-122 Pfam domains (2)
Pfam domains (3) SspB-2qazD03 D:11-122 Pfam domains (3)
Pfam domains (4) SspB-2qazD04 D:11-122 Pfam domains (4)
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhh.........eeeee............hhhhh.....eee....eeeee...eeeeee......ee..ee...eeeeee....eeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
2qaz D 11 MQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPDEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFS 122
20 30 40 50 60 70 80 90 100 110 120
Legend: |
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→ Mismatch |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |