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(-) Description

Title :  ANABAENA SENSORY RHODOPSIN TRANSDUCER
 
Authors :  L. Vogeley, O. A. Sineshchekov, V. D. Trivedi, E. N. Spudich, J. L. Spudi H. Luecke
Date :  27 Sep 06  (Deposition) - 20 Mar 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (4x)
Keywords :  Rhodopsin, Transducer, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Vogeley, V. D. Trivedi, O. A. Sineshchekov, E. N. Spudich, J. L. Spudich, H. Luecke
Crystal Structure Of The Anabaena Sensory Rhodopsin Transducer.
J. Mol. Biol. V. 367 741 2007
PubMed-ID: 17289074  |  Reference-DOI: 10.1016/J.JMB.2006.11.074

(-) Compounds

Molecule 1 - SENSORY RHODOPSIN TRANSDUCER PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PKJ
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Organism Scientific: ANABAENA SP.
    Organism Taxid: 1167

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (4x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Gly A:58 -Pro A:59
2Asp A:79 -Pro A:80

 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:89
 aligned with Q8YSC3_NOSS1 | Q8YSC3 from UniProtKB/TrEMBL  Length:125

    Alignment length:101
                                    14        24        34        44        54        64        74        84        94       104 
         Q8YSC3_NOSS1     5 IGRTCWAIAEGYIPPYGNGPEPQFISHETVCILNAGDEDAHVEITIYYSDKEPVGPYRLTVPARRTKHVRFNDLNDPAPIPHDTDFASVIQSNVPIVVQHT 105
               SCOP domains d2iiaa_ A: auto            mated matches                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee....------------.eeeeee.....eeeeeeee......eeeeeeee...eeeeee.hhh...........eeeeeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
                 2iia A   4 IGRTCWAIAEGYIPP------------ETVCILNAGDEDAHVEITIYYSDKEPVGPYRLTVPARRTKHVRFNDLNDPAPIPHDTDFASVIQSNVPIVVQHT 104
                                    13    |    -       |33        43        53        63        73        83        93       103 
                                         18           31
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

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 Related Entries

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UniProtKB/TrEMBL
        Q8YSC3_NOSS1 | Q8YSC3: 2ii7 2ii8 2ii9

(-) Related Entries Specified in the PDB File

2ii7 2ii8 2ii9