Chain A from PDB Type:PROTEIN Length:143
aligned with FITB_NEIG1 | Q5F882 from UniProtKB/Swiss-Prot Length:139
Alignment length:143
139
10 20 30 40 50 60 70 80 90 100 110 120 130 |-
FITB_NEIG1 1 MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELRLGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSLTVATRDTGSFFAADVAVFNPWHD---- -
SCOP domains d2h1oa1 A:1-138 Trafficking protein B ----- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeehhhhhhhhhh...hhhhhhhhhh.hhh.eeeehhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..ee..hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh..eee..hhhhhhhhh..ee......... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h1o A 1 MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAEMRLGVALLLNGKKKNVLHERMEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSMTVATRDTGSFFAADVAVFNPWHLEHHH 143
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain B from PDB Type:PROTEIN Length:140
aligned with FITB_NEIG1 | Q5F882 from UniProtKB/Swiss-Prot Length:139
Alignment length:140
139
10 20 30 40 50 60 70 80 90 100 110 120 130 |-
FITB_NEIG1 1 MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELRLGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSLTVATRDTGSFFAADVAVFNPWHD- -
SCOP domains d2h1ob1 B:1-138 Trafficking protein B -- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeehhhhhh.......hhhhhhhhhhhhhh.eeeehhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..ee..hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh..eee..hhhhhhhh...ee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h1o B 1 MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAEMRLGVALLLNGKKKNVLHERMEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSMTVATRDTGSFFAADVAVFNPWHLE 140
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain C from PDB Type:PROTEIN Length:143
aligned with FITB_NEIG1 | Q5F882 from UniProtKB/Swiss-Prot Length:139
Alignment length:143
139
10 20 30 40 50 60 70 80 90 100 110 120 130 |-
FITB_NEIG1 1 MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELRLGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSLTVATRDTGSFFAADVAVFNPWHD---- -
SCOP domains d2h1oc1 C:1-138 Trafficking protein B ----- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeehhhhhhhhhh...hhhhhhhhhhhhhh.eeeehhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..ee..hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh..eee..hhhhhhhhh..ee......... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h1o C 1 MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAEMRLGVALLLNGKKKNVLHERMEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSMTVATRDTGSFFAADVAVFNPWHLEHHH 143
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain D from PDB Type:PROTEIN Length:140
aligned with FITB_NEIG1 | Q5F882 from UniProtKB/Swiss-Prot Length:139
Alignment length:140
139
10 20 30 40 50 60 70 80 90 100 110 120 130 |-
FITB_NEIG1 1 MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELRLGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSLTVATRDTGSFFAADVAVFNPWHD- -
SCOP domains d2h1od1 D:1-138 Trafficking protein B -- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeehhhhhhhhhh...hhhhhhhhhhhhhh.eeeehhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.eee..hhhhhhhh...ee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h1o D 1 MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAEMRLGVALLLNGKKKNVLHERMEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSMTVATRDTGSFFAADVAVFNPWHLE 140
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain E from PDB Type:PROTEIN Length:68
aligned with FITA_NEIG1 | Q5F881 from UniProtKB/Swiss-Prot Length:78
Alignment length:68
11 21 31 41 51 61
FITA_NEIG1 2 ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVELEDVRG 69
SCOP domains d2h1oe1 E:2-69 Trafficking protein A SCOP domains
CATH domains -------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eee...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
2h1o E 2 ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVELEDVRG 69
11 21 31 41 51 61
Chain F from PDB Type:PROTEIN Length:64
aligned with FITA_NEIG1 | Q5F881 from UniProtKB/Swiss-Prot Length:78
Alignment length:64
11 21 31 41 51 61
FITA_NEIG1 2 ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVELE 65
SCOP domains d2h1of1 F:2-65 Trafficking protein A SCOP domains
CATH domains ---------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------- Pfam domains
Sec.struct. author ..eee...hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------- Transcript
2h1o F 2 ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVELE 65
11 21 31 41 51 61
Chain G from PDB Type:PROTEIN Length:67
aligned with FITA_NEIG1 | Q5F881 from UniProtKB/Swiss-Prot Length:78
Alignment length:67
11 21 31 41 51 61
FITA_NEIG1 2 ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVELEDVR 68
SCOP domains d2h1og1 G:2-68 Trafficking protein A SCOP domains
CATH domains ------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eee...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------- Transcript
2h1o G 2 ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVELEDVR 68
11 21 31 41 51 61
Chain H from PDB Type:PROTEIN Length:63
aligned with FITA_NEIG1 | Q5F881 from UniProtKB/Swiss-Prot Length:78
Alignment length:63
11 21 31 41 51 61
FITA_NEIG1 2 ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVEL 64
SCOP domains d2h1oh1 H:2-64 Trafficking protein A SCOP domains
CATH domains --------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------- Pfam domains
Sec.struct. author ..eee.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------- Transcript
2h1o H 2 ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVEL 64
11 21 31 41 51 61
Chain U from PDB Type:DNA Length:36
2h1o U 1 AGATTGCTATCATTTTTTTTATTTTGATAGCATuTG 36
10 20 30 |
34-5IU
Chain V from PDB Type:DNA Length:36
2h1o V 37 CAAATGCTATCAAAAuAAAAAAAATGATAGCAATCT 72
46 | 56 66
52-5IU
Legend: |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |