Chain A from PDB Type:PROTEIN Length:329
aligned with TRUB_PYRFU | Q7LWY0 from UniProtKB/Swiss-Prot Length:340
Alignment length:329
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324
TRUB_PYRFU 5 EVRRILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPRDWYPKL 333
SCOP domains d2ey4a2 A:8-252 Pseudouridine synthase II TruB d2ey4a1 A:253-336 Pseudouridine synthase II TruB, C-terminal domain SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhh...eee.............hhhhhhhhhhhhheeeeeee....hhhhhhhhhhhhh....eee........eeeeeeee.hhhhhhhhhh...eeeeeeeee....hhhhhhhhhhh..eeeee............eeeeeeeeeeeeee..eeeeeeee....hhhhhhhhhhhhh...eeeeeeeeeee..ee......hhhhhhhhhhhhhhhh.hhhhhhh.ee.hhhhh...eeeehhhhhhhhh....ee...eeeee.......eeeeee....eeeeeee..hhhhhhhh...eeeeeeee.......... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PUA PDB: A:253-328 UniProt: 250-325 -------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ey4 A 8 EVRRILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPRDWYPKL 336
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327
Chain B from PDB Type:PROTEIN Length:326
aligned with TRUB_PYRFU | Q7LWY0 from UniProtKB/Swiss-Prot Length:340
Alignment length:326
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327
TRUB_PYRFU 8 RILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPRDWYPKL 333
SCOP domains d2ey4b2 B:11-252 Pseudouridine synthase II TruB d2ey4b1 B:253-336 Pseudouridine synthase II TruB, C-terminal domain SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhh...eee.............hhhhhhhhhhhhheeeeeee....hhhhhhhhhhhhh....eee........eeeeeeee.hhhhhhhhh....eeeeeeeee....hhhhhhhhhhhh.eeee..............eeeeeeeeeeeee..eeeeeeee....hhhhhhhhhhhhhh..eeeeeeeeeee..ee......hhhhhhhhhhhhhhhh.hhhhhhheee.hhhhh...eeeehhhhhhhhhh...ee...eeeee.......eeeee.....eeeeeee..hhhhhhhh...eeeeeeee.......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PUA PDB: B:253-328 UniProt: 250-325 -------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ey4 B 11 RILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPRDWYPKL 336
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330
Chain C from PDB Type:PROTEIN Length:73
aligned with Q8U029_PYRFU | Q8U029 from UniProtKB/TrEMBL Length:104
Alignment length:73
17 27 37 47 57 67 77
Q8U029_PYRFU 8 MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVD 80
SCOP domains d2ey4c1 C:1-73 Gar1 homolog PF1791 SCOP domains
CATH domains 2ey4C00 C:1-73 Probable tRNA pseudouridine synthase domain CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeee...eeeee.........eee.......eeeeeeeee....eeeeee.............ee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
2ey4 C 1 MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVD 73
10 20 30 40 50 60 70
Chain D from PDB Type:PROTEIN Length:75
aligned with Q8U029_PYRFU | Q8U029 from UniProtKB/TrEMBL Length:104
Alignment length:75
17 27 37 47 57 67 77
Q8U029_PYRFU 8 MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDER 82
SCOP domains d2ey4d_ D: automated matches SCOP domains
CATH domains 2ey4D00 D:1-75 Probable tRNA pseudouridine synthase domain CATH domains
Pfam domains --------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeee...eeeee.........eeee....eeeeeeeeeee....eeeeee...hhhhhh..eeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------- Transcript
2ey4 D 1 MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDER 75
10 20 30 40 50 60 70
Chain E from PDB Type:PROTEIN Length:52
aligned with NOP10_PYRFU | Q8U1R4 from UniProtKB/Swiss-Prot Length:60
Alignment length:52
13 23 33 43 53
NOP10_PYRFU 4 RIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI 55
SCOP domains d2ey4e1 E:4-55 Ribosome biogenesis protein Nop10 SCOP domains
CATH domains ---------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------- Pfam domains
Sec.struct. author ..ee......ee............ee...........hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------- PROSITE
Transcript ---------------------------------------------------- Transcript
2ey4 E 4 RIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI 55
13 23 33 43 53
Chain F from PDB Type:PROTEIN Length:52
aligned with NOP10_PYRFU | Q8U1R4 from UniProtKB/Swiss-Prot Length:60
Alignment length:52
13 23 33 43 53
NOP10_PYRFU 4 RIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI 55
SCOP domains d2ey4f_ F: automated matches SCOP domains
CATH domains 2ey4F00 F:4-55 Nop10-like SnoRNP CATH domains
Pfam domains ---------------------------------------------------- Pfam domains
Sec.struct. author ..eee....eee............ee...........hhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------- PROSITE
Transcript ---------------------------------------------------- Transcript
2ey4 F 4 RIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI 55
13 23 33 43 53
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |