Chain A from PDB Type:PROTEIN Length:69
aligned with DEVR_MYCTU | P9WMF9 from UniProtKB/Swiss-Prot Length:217
Alignment length:69
154 164 174 184 194 204
DEVR_MYCTU 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPP 213
SCOP domains d1zlja_ A: automated matches SCOP domains
CATH domains 1zljA00 A:145-213 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) HTH_LUXR_2 PDB: - UniProt: 143-208 ----- PROSITE (1)
PROSITE (2) -------------------HTH_LUXR_1 PDB: A:164-191 ---------------------- PROSITE (2)
Transcript --------------------------------------------------------------------- Transcript
1zlj A 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKRSRPP 213
154 164 174 184 194 204
174-MSE 194-MSE
Chain A from PDB Type:PROTEIN Length:69
aligned with R4MI41_MYCTX | R4MI41 from UniProtKB/TrEMBL Length:217
Alignment length:69
154 164 174 184 194 204
R4MI41_MYCTX 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPP 213
SCOP domains d1zlja_ A: automated matches SCOP domains
CATH domains 1zljA00 A:145-213 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zlj A 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKRSRPP 213
154 164 174 184 194 204
174-MSE 194-MSE
Chain B from PDB Type:PROTEIN Length:69
aligned with DEVR_MYCTU | P9WMF9 from UniProtKB/Swiss-Prot Length:217
Alignment length:69
150 160 170 180 190 200
DEVR_MYCTU 141 AEKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR 209
SCOP domains d1zljb_ B: automated matches SCOP domains
CATH domains 1zljB00 B:141-209 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --HTH_LUXR_2 PDB: B:144-208 UniProt: 143-208 - PROSITE (1)
PROSITE (2) -----------------------HTH_LUXR_1 PDB: B:164-191 ------------------ PROSITE (2)
Transcript --------------------------------------------------------------------- Transcript
1zlj B 141 SHmQDPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKR 209
| 150 160 170 | 180 190 | 200
143-MSE 174-MSE 194-MSE
Chain B from PDB Type:PROTEIN Length:69
aligned with R4MI41_MYCTX | R4MI41 from UniProtKB/TrEMBL Length:217
Alignment length:69
150 160 170 180 190 200
R4MI41_MYCTX 141 AEKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR 209
SCOP domains d1zljb_ B: automated matches SCOP domains
CATH domains 1zljB00 B:141-209 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zlj B 141 SHmQDPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKR 209
| 150 160 170 | 180 190 | 200
143-MSE 174-MSE 194-MSE
Chain C from PDB Type:PROTEIN Length:69
aligned with DEVR_MYCTU | P9WMF9 from UniProtKB/Swiss-Prot Length:217
Alignment length:69
154 164 174 184 194 204
DEVR_MYCTU 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPP 213
SCOP domains d1zljc_ C: automated matches SCOP domains
CATH domains 1zljC00 C:145-213 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) HTH_LUXR_2 PDB: - UniProt: 143-208 ----- PROSITE (1)
PROSITE (2) -------------------HTH_LUXR_1 PDB: C:164-191 ---------------------- PROSITE (2)
Transcript --------------------------------------------------------------------- Transcript
1zlj C 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKRSRPP 213
154 164 174 184 194 204
174-MSE 194-MSE
Chain C from PDB Type:PROTEIN Length:69
aligned with R4MI41_MYCTX | R4MI41 from UniProtKB/TrEMBL Length:217
Alignment length:69
154 164 174 184 194 204
R4MI41_MYCTX 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPP 213
SCOP domains d1zljc_ C: automated matches SCOP domains
CATH domains 1zljC00 C:145-213 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zlj C 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKRSRPP 213
154 164 174 184 194 204
174-MSE 194-MSE
Chain D from PDB Type:PROTEIN Length:66
aligned with DEVR_MYCTU | P9WMF9 from UniProtKB/Swiss-Prot Length:217
Alignment length:66
153 163 173 183 193 203
DEVR_MYCTU 144 QDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR 209
SCOP domains d1zljd_ D: automated matches SCOP domains
CATH domains 1zljD00 D:144-209 'winged helix' repressor DNA binding domain CATH domains
Pfam domains ------------------------------------------------------------------ Pfam domains
Sec.struct. author .......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
PROSITE (1) HTH_LUXR_2 PDB: - UniProt: 143-208 - PROSITE (1)
PROSITE (2) --------------------HTH_LUXR_1 PDB: D:164-191 ------------------ PROSITE (2)
Transcript ------------------------------------------------------------------ Transcript
1zlj D 144 QDPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKR 209
153 163 173| 183 193| 203
174-MSE 194-MSE
Chain D from PDB Type:PROTEIN Length:66
aligned with R4MI41_MYCTX | R4MI41 from UniProtKB/TrEMBL Length:217
Alignment length:66
153 163 173 183 193 203
R4MI41_MYCTX 144 QDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR 209
SCOP domains d1zljd_ D: automated matches SCOP domains
CATH domains 1zljD00 D:144-209 'winged helix' repressor DNA binding domain CATH domains
Pfam domains ------------------------------------------------------------------ Pfam domains
Sec.struct. author .......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------ Transcript
1zlj D 144 QDPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKR 209
153 163 173| 183 193| 203
174-MSE 194-MSE
Chain E from PDB Type:PROTEIN Length:69
aligned with DEVR_MYCTU | P9WMF9 from UniProtKB/Swiss-Prot Length:217
Alignment length:69
154 164 174 184 194 204
DEVR_MYCTU 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPP 213
SCOP domains d1zlje_ E: automated matches SCOP domains
CATH domains 1zljE00 E:145-213 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) HTH_LUXR_2 PDB: - UniProt: 143-208 ----- PROSITE (1)
PROSITE (2) -------------------HTH_LUXR_1 PDB: E:164-191 ---------------------- PROSITE (2)
Transcript --------------------------------------------------------------------- Transcript
1zlj E 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKRSRPP 213
154 164 174 184 194 204
174-MSE 194-MSE
Chain E from PDB Type:PROTEIN Length:69
aligned with R4MI41_MYCTX | R4MI41 from UniProtKB/TrEMBL Length:217
Alignment length:69
154 164 174 184 194 204
R4MI41_MYCTX 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPP 213
SCOP domains d1zlje_ E: automated matches SCOP domains
CATH domains 1zljE00 E:145-213 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zlj E 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKRSRPP 213
154 164 174 184 194 204
174-MSE 194-MSE
Chain F from PDB Type:PROTEIN Length:69
aligned with DEVR_MYCTU | P9WMF9 from UniProtKB/Swiss-Prot Length:217
Alignment length:69
150 160 170 180 190 200
DEVR_MYCTU 141 AEKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR 209
SCOP domains d1zljf_ F: automated matches SCOP domains
CATH domains 1zljF00 F:141-209 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --HTH_LUXR_2 PDB: F:144-208 UniProt: 143-208 - PROSITE (1)
PROSITE (2) -----------------------HTH_LUXR_1 PDB: F:164-191 ------------------ PROSITE (2)
Transcript --------------------------------------------------------------------- Transcript
1zlj F 141 SHmQDPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKR 209
| 150 160 170 | 180 190 | 200
143-MSE 174-MSE 194-MSE
Chain F from PDB Type:PROTEIN Length:69
aligned with R4MI41_MYCTX | R4MI41 from UniProtKB/TrEMBL Length:217
Alignment length:69
150 160 170 180 190 200
R4MI41_MYCTX 141 AEKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR 209
SCOP domains d1zljf_ F: automated matches SCOP domains
CATH domains 1zljF00 F:141-209 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zlj F 141 SHmQDPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKR 209
| 150 160 170 | 180 190 | 200
143-MSE 174-MSE 194-MSE
Chain G from PDB Type:PROTEIN Length:69
aligned with DEVR_MYCTU | P9WMF9 from UniProtKB/Swiss-Prot Length:217
Alignment length:69
154 164 174 184 194 204
DEVR_MYCTU 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPP 213
SCOP domains d1zljg_ G: automated matches SCOP domains
CATH domains 1zljG00 G:145-213 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) HTH_LUXR_2 PDB: - UniProt: 143-208 ----- PROSITE (1)
PROSITE (2) -------------------HTH_LUXR_1 PDB: G:164-191 ---------------------- PROSITE (2)
Transcript --------------------------------------------------------------------- Transcript
1zlj G 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKRSRPP 213
154 164 174 184 194 204
174-MSE 194-MSE
Chain G from PDB Type:PROTEIN Length:69
aligned with R4MI41_MYCTX | R4MI41 from UniProtKB/TrEMBL Length:217
Alignment length:69
154 164 174 184 194 204
R4MI41_MYCTX 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPP 213
SCOP domains d1zljg_ G: automated matches SCOP domains
CATH domains 1zljG00 G:145-213 'winged helix' repressor DNA binding domain CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zlj G 145 DPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKRSRPP 213
154 164 174 184 194 204
174-MSE 194-MSE
Chain H from PDB Type:PROTEIN Length:66
aligned with DEVR_MYCTU | P9WMF9 from UniProtKB/Swiss-Prot Length:217
Alignment length:66
153 163 173 183 193 203
DEVR_MYCTU 144 QDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR 209
SCOP domains d1zljh_ H: automated matches SCOP domains
CATH domains 1zljH00 H:144-209 'winged helix' repressor DNA binding domain CATH domains
Pfam domains (1) ---GerE-1zljH01 H:147-204 ----- Pfam domains (1)
Pfam domains (2) ---GerE-1zljH02 H:147-204 ----- Pfam domains (2)
Pfam domains (3) ---GerE-1zljH03 H:147-204 ----- Pfam domains (3)
Pfam domains (4) ---GerE-1zljH04 H:147-204 ----- Pfam domains (4)
Pfam domains (5) ---GerE-1zljH05 H:147-204 ----- Pfam domains (5)
Pfam domains (6) ---GerE-1zljH06 H:147-204 ----- Pfam domains (6)
Pfam domains (7) ---GerE-1zljH07 H:147-204 ----- Pfam domains (7)
Pfam domains (8) ---GerE-1zljH08 H:147-204 ----- Pfam domains (8)
Sec.struct. author .......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
PROSITE (1) HTH_LUXR_2 PDB: - UniProt: 143-208 - PROSITE (1)
PROSITE (2) --------------------HTH_LUXR_1 PDB: H:164-191 ------------------ PROSITE (2)
Transcript ------------------------------------------------------------------ Transcript
1zlj H 144 QDPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKR 209
153 163 173| 183 193| 203
174-MSE 194-MSE
Chain H from PDB Type:PROTEIN Length:66
aligned with R4MI41_MYCTX | R4MI41 from UniProtKB/TrEMBL Length:217
Alignment length:66
153 163 173 183 193 203
R4MI41_MYCTX 144 QDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR 209
SCOP domains d1zljh_ H: automated matches SCOP domains
CATH domains 1zljH00 H:144-209 'winged helix' repressor DNA binding domain CATH domains
Pfam domains (1) ---GerE-1zljH01 H:147-204 ----- Pfam domains (1)
Pfam domains (2) ---GerE-1zljH02 H:147-204 ----- Pfam domains (2)
Pfam domains (3) ---GerE-1zljH03 H:147-204 ----- Pfam domains (3)
Pfam domains (4) ---GerE-1zljH04 H:147-204 ----- Pfam domains (4)
Pfam domains (5) ---GerE-1zljH05 H:147-204 ----- Pfam domains (5)
Pfam domains (6) ---GerE-1zljH06 H:147-204 ----- Pfam domains (6)
Pfam domains (7) ---GerE-1zljH07 H:147-204 ----- Pfam domains (7)
Pfam domains (8) ---GerE-1zljH08 H:147-204 ----- Pfam domains (8)
Sec.struct. author .......hhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------ Transcript
1zlj H 144 QDPLSGLTDQERTLLGLLSEGLTNKQIADRmFLAEKTVKNYVSRLLAKLGmERRTQAAVFATELKR 209
153 163 173| 183 193| 203
174-MSE 194-MSE
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |