1Z68 - JenaLib

Asymmetric/Biological Unit (24, 48)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.2a	ENST00000188790	2a	ENSE00001378583	chr2:163100045-163099832	214	SEPR_HUMAN	1-2	2	0	-	-
1.3b	ENST00000188790	3b	ENSE00000779556	chr2:163099502-163099418	85	SEPR_HUMAN	3-31	29	0	-	-
1.4	ENST00000188790	4	ENSE00000779554	chr2:163083131-163083033	99	SEPR_HUMAN	31-64	34	2	A:39-64 B:39-64	26 26
1.5	ENST00000188790	5	ENSE00000779552	chr2:163082087-163081993	95	SEPR_HUMAN	64-95	32	2	A:64-95 B:64-95	32 32
1.6	ENST00000188790	6	ENSE00000779551	chr2:163081050-163080976	75	SEPR_HUMAN	96-120	25	2	A:96-120 B:96-120	25 25
1.7b	ENST00000188790	7b	ENSE00000779550	chr2:163080170-163080118	53	SEPR_HUMAN	121-138	18	2	A:121-138 B:121-138	18 18
1.9b	ENST00000188790	9b	ENSE00000779549	chr2:163076435-163076363	73	SEPR_HUMAN	138-162	25	2	A:138-162 B:138-162	25 25
1.10b	ENST00000188790	10b	ENSE00000779548	chr2:163075693-163075573	121	SEPR_HUMAN	163-203	41	2	A:163-203 B:163-203	41 41
1.11	ENST00000188790	11	ENSE00000779547	chr2:163074650-163074496	155	SEPR_HUMAN	203-254	52	2	A:203-254 B:203-254	52 52
1.12	ENST00000188790	12	ENSE00000779546	chr2:163072511-163072408	104	SEPR_HUMAN	255-289	35	2	A:255-289 B:255-289	35 35
1.13	ENST00000188790	13	ENSE00000779545	chr2:163070583-163070448	136	SEPR_HUMAN	289-334	46	2	A:289-334 B:289-334	46 46
1.14a	ENST00000188790	14a	ENSE00000779544	chr2:163066506-163066462	45	SEPR_HUMAN	335-349	15	2	A:335-349 B:335-349	15 15
1.15	ENST00000188790	15	ENSE00000779543	chr2:163059655-163059551	105	SEPR_HUMAN	350-384	35	2	A:350-384 B:350-384	35 35
1.16	ENST00000188790	16	ENSE00000779542	chr2:163059452-163059382	71	SEPR_HUMAN	385-408	24	2	A:385-408 B:385-408	24 24
1.17	ENST00000188790	17	ENSE00000779541	chr2:163057129-163057076	54	SEPR_HUMAN	408-426	19	2	A:408-426 B:408-426	19 19
1.18a	ENST00000188790	18a	ENSE00000779540	chr2:163055391-163055267	125	SEPR_HUMAN	426-468	43	2	A:426-468 B:426-468	43 43
1.21b	ENST00000188790	21b	ENSE00001665588	chr2:163051258-163051211	48	SEPR_HUMAN	468-484	17	2	A:468-484 B:468-484	17 17
1.23	ENST00000188790	23	ENSE00001709931	chr2:163046264-163046166	99	SEPR_HUMAN	484-517	34	2	A:484-517 B:484-517	34 34
1.24	ENST00000188790	24	ENSE00001647949	chr2:163045682-163045613	70	SEPR_HUMAN	517-540	24	2	A:517-540 B:517-540	24 24
1.25b	ENST00000188790	25b	ENSE00001720161	chr2:163044873-163044679	195	SEPR_HUMAN	540-605	66	2	A:540-605 B:540-605	66 66
1.26b	ENST00000188790	26b	ENSE00001708450	chr2:163039978-163039924	55	SEPR_HUMAN	605-623	19	2	A:605-623 B:605-623	19 19
1.27b	ENST00000188790	27b	ENSE00001633592	chr2:163031476-163031377	100	SEPR_HUMAN	624-657	34	2	A:624-657 B:624-657	34 34
1.28a	ENST00000188790	28a	ENSE00001717318	chr2:163030297-163030233	65	SEPR_HUMAN	657-678	22	2	A:657-678 B:657-678	22 22
1.29a	ENST00000188790	29a	ENSE00001633925	chr2:163029731-163029659	73	SEPR_HUMAN	679-703	25	2	A:679-703 B:679-703	25 25
1.30b	ENST00000188790	30b	ENSE00001703871	chr2:163029394-163029321	74	SEPR_HUMAN	703-727	25	2	A:703-727 B:703-727	25 25
1.31b	ENST00000188790	31b	ENSE00001881676	chr2:163027590-163027200	391	SEPR_HUMAN	728-760	33	2	A:728-757 B:728-757	30 30

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:719
 aligned with SEPR_HUMAN | Q12884 from UniProtKB/Swiss-Prot  Length:760

    Alignment length:719
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748         
           SEPR_HUMAN    39 MRALTLKDILNGTFSYKTFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCFS 757
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1z68A01 A:39-502  [code=2.140.10.30, no name defined]                                                                                                                                                                                                                                                                                                                                                                                                                           1z68A02 A:503-757  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhh.........ee....eeeee.....eeeee.....eeeeehhhhhhh....eeee.....eeeeeeeeee.....eeeeeeeee....ee............eee......eeeee..eeeee.......ee.........eee...hhhhhhhh......eee.....eeeeeeee.....eeeeee.......eeeeee.........eeeeeeee..hhhhhh.ee...hhhhhh..eeeeeeee....eeeeeeee....eeeeeeeee......ee.hhh.eeeee..............ee......eeeeee.....eeeeee.......ee.......eeeeeee...eeeeee.hhhhh....eeeeee.......eee............eeeee.hhhh.eeeee......eeeee......eeeeee.hhhhhhhh......eeeeeeeee..eeeeeeeee.........eeeeeee...............hhhhhhhhh...eeeeee.......hhhhhhhhh...hhhhhhhhhhhhhhhhh...eeeeeeeeeeehhhhhhhhhhhh.......eeeee.........hhhhhhhhhh......hhhhhhhh.hhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhh....eeeee........hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4  PDB: A:39-64    -------------------------------Exon 1.6  PDB: A:96-120  Exon 1.7b         ------------------------Exon 1.10b  PDB: A:163-203               ---------------------------------------------------Exon 1.12  PDB: A:255-289          ---------------------------------------------Exon 1.14a     Exon 1.15  PDB: A:350-384          Exon 1.16  PDB: A:385-40-----------------Exon 1.18a  PDB: A:426-468 UniProt: 426-468---------------Exon 1.23  PDB: A:484-517         ----------------------Exon 1.25b  PDB: A:540-605 UniProt: 540-605                       ------------------Exon 1.27b  PDB: A:624-657        ---------------------Exon 1.29a  PDB: A:679-70------------------------Exon 1.31b  PDB: A:728-757     Transcript 1 (1)
           Transcript 1 (2) -------------------------Exon 1.5  PDB: A:64-95          ------------------------------------------Exon 1.9b  PDB: A:138-162----------------------------------------Exon 1.11  PDB: A:203-254 UniProt: 203-254          ----------------------------------Exon 1.13  PDB: A:289-334 UniProt: 289-334    -------------------------------------------------------------------------Exon 1.17          -----------------------------------------Exon 1.21b       --------------------------------Exon 1.24  PDB: A:517-54----------------------------------------------------------------Exon 1.26b         ---------------------------------Exon 1.28a            ------------------------Exon 1.30b  PDB: A:703-72------------------------------ Transcript 1 (2)
                 1z68 A  39 MRALTLKDILNGTFSYKTFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCFS 757
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748

Chain B from PDB  Type:PROTEIN  Length:719
 aligned with SEPR_HUMAN | Q12884 from UniProtKB/Swiss-Prot  Length:760

    Alignment length:719
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748         
           SEPR_HUMAN    39 MRALTLKDILNGTFSYKTFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCFS 757
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1z68B01 B:39-502  [code=2.140.10.30, no name defined]                                                                                                                                                                                                                                                                                                                                                                                                                           1z68B02 B:503-757  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                         CATH domains
           Pfam domains (1) -------------------------------------------------------------------DPPIV_N-1z68B03 B:106-473                                                                                                                                                                                                                                                                                                                                                       -------------------------------------------------------------------------------Peptidase_S9-1z68B01 B:553-757                                                                                                                                                                                Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------DPPIV_N-1z68B04 B:106-473                                                                                                                                                                                                                                                                                                                                                       -------------------------------------------------------------------------------Peptidase_S9-1z68B02 B:553-757                                                                                                                                                                                Pfam domains (2)
         Sec.struct. author ....hhhhhhh................eeee.......eeee.....eee..hhhhhhh....eeee.....eeeeeeeeee.....eeeeeeeee....ee...........eeee......eeeee..eeeee.......ee.........eee...hhhhhhhh......eee.....eeeeeeee.....eeeeee.......eeeeee.........eeeeeeee..hhhhhh.ee...hhhhhh..eeeeeeee....eeeeeeee....eeeeeeeeee....eee.hhh.eeeee..............ee......eeeeee.....eeeeee..hhhhhee.......eeeeeee...eeeeee.hhhhh....eeeeee.......eee.........eeeeeeee.hhh.eeeeeeeee...eeeeee.....eeeeee.hhhhhhhhhhh...eeeeeeee....eeeeeeee.........eeeeeee...............hhhhhhhhh...eeeeee.......hhhhhhhhh....hhhhhhhhhhhhhhhhh..eeeeeeeeeeehhhhhhhhhhhh.......eeeee.........hhhhhhhhhh......hhhhhhhh.hhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4  PDB: B:39-64    -------------------------------Exon 1.6  PDB: B:96-120  Exon 1.7b         ------------------------Exon 1.10b  PDB: B:163-203               ---------------------------------------------------Exon 1.12  PDB: B:255-289          ---------------------------------------------Exon 1.14a     Exon 1.15  PDB: B:350-384          Exon 1.16  PDB: B:385-40-----------------Exon 1.18a  PDB: B:426-468 UniProt: 426-468---------------Exon 1.23  PDB: B:484-517         ----------------------Exon 1.25b  PDB: B:540-605 UniProt: 540-605                       ------------------Exon 1.27b  PDB: B:624-657        ---------------------Exon 1.29a  PDB: B:679-70------------------------Exon 1.31b  PDB: B:728-757     Transcript 1 (1)
           Transcript 1 (2) -------------------------Exon 1.5  PDB: B:64-95          ------------------------------------------Exon 1.9b  PDB: B:138-162----------------------------------------Exon 1.11  PDB: B:203-254 UniProt: 203-254          ----------------------------------Exon 1.13  PDB: B:289-334 UniProt: 289-334    -------------------------------------------------------------------------Exon 1.17          -----------------------------------------Exon 1.21b       --------------------------------Exon 1.24  PDB: B:517-54----------------------------------------------------------------Exon 1.26b         ---------------------------------Exon 1.28a            ------------------------Exon 1.30b  PDB: B:703-72------------------------------ Transcript 1 (2)
                 1z68 B  39 MRALTLKDILNGTFSYKTFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCFS 757
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (2, 4)

Pfam Domains (2, 4)

Gene Ontology (44, 44)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (SEPR_HUMAN | Q12884)

molecular function
	GO:0008239	dipeptidyl-peptidase activity	Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain.
	GO:0004175	endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0005178	integrin binding	Interacting selectively and non-covalently with an integrin.
	GO:0004222	metalloendopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0002020	protease binding	Interacting selectively and non-covalently with any protease or peptidase.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0046983	protein dimerization activity	The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
	GO:0004252	serine-type endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
	GO:0008236	serine-type peptidase activity	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
	GO:0001525	angiogenesis	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
	GO:0006915	apoptotic process	A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
	GO:0007155	cell adhesion	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
	GO:0043542	endothelial cell migration	The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.
	GO:1902362	melanocyte apoptotic process	Any apoptotic process in a melanocyte, the main structural component of the epidermis.
	GO:0097325	melanocyte proliferation	The multiplication or reproduction of melanocytes, resulting in the expansion of a cell population. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.
	GO:0071850	mitotic cell cycle arrest	The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M).
	GO:0060244	negative regulation of cell proliferation involved in contact inhibition	Any process that stops, prevents or reduces the rate or extent of cell proliferation in response to cell density.
	GO:0010716	negative regulation of extracellular matrix disassembly	Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.
	GO:1903054	negative regulation of extracellular matrix organization	Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization.
	GO:0071158	positive regulation of cell cycle arrest	Any process that increases the rate, frequency, or extent of cell cycle arrest, the process in which the cell cycle is halted during one of the normal phases.
	GO:1900119	positive regulation of execution phase of apoptosis	Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis.
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
	GO:0051603	proteolysis involved in cellular protein catabolic process	The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
	GO:0010710	regulation of collagen catabolic process	Any process that modulates the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.
	GO:0051917	regulation of fibrinolysis	Any process that modulates the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots.
cellular component
	GO:0045177	apical part of cell	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.
	GO:0045178	basal part of cell	The region of a cell situated near the base. For example, in a polarized epithelial cell, the basal surface rests on the basal lamina that separates the epithelium from other tissue.
	GO:0030054	cell junction	A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
	GO:0042995	cell projection	A prolongation or process extending from a cell, e.g. a flagellum or axon.
	GO:0009986	cell surface	The external part of the cell wall and/or plasma membrane.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:0005925	focal adhesion	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0071438	invadopodium membrane	The portion of the plasma membrane surrounding an invadopodium.
	GO:0030027	lamellipodium	A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
	GO:0031258	lamellipodium membrane	The portion of the plasma membrane surrounding a lamellipodium.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0032587	ruffle membrane	The portion of the plasma membrane surrounding a ruffle.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 12)

Sites (12, 12)

SS Bonds (8, 8)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 2)

PROSITE Motifs (0, 0)

Exons (24, 48)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (2, 4)

Pfam Domains (2, 4)

Gene Ontology (44, 44)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File