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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN FIBROBLAST ACTIVATION PROTEIN ALP
Keywords SEPRASE, FIBROBLAST ACTIVATION PROTEIN ALPHA, FAPALPHA, DIPEPTIDYLPEPTIDASE, S9B, INTEGRAL MEMBRANE SERINE PROTEASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1Z68     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FIBROBLAST ACTIVATION PROTEIN, ALPHA SUBUNIT  A 719 5889 0
2  Protein   FIBROBLAST ACTIVATION PROTEIN, ALPHA SUBUNIT  B 719 5889 0
3  Ligand    C 2 0 28
4  Ligand    D 2 0 28
5  Ligand    E 2 0 28
6  Ligand   FIBROBLAST ACTIVATION PROTEIN, ALPHA SUBUNIT  A 2 0 28
7  Ligand   FIBROBLAST ACTIVATION PROTEIN, ALPHA SUBUNIT  B 4 0 56
8 Water     628 0 628
total       2078 11778 796
Proteins
Unit 1 MET39 ARG40 ALA41 LEU42 THR43 LEU44 LYS45 ASP46 ILE47 LEU48 ASN49 GLY50 THR51 PHE52 SER53 TYR54 LYS55 THR56 PHE57 PHE58 PRO59 ASN60 TRP61 ILE62 SER63 GLY64 GLN65 GLU66 TYR67 LEU68 HIS69 GLN70 SER71 ALA72 ASP73 ASN74 ASN75 ILE76 VAL77 LEU78 TYR79 ASN80 ILE81 GLU82 THR83 GLY84 GLN85 SER86 TYR87 THR88 ILE89 LEU90 SER91 ASN92 ARG93 THR94 MET95 LYS96 SER97 VAL98 ASN99 ALA100 SER101 ASN102 TYR103 GLY104 LEU105 SER106 PRO107 ASP108 ARG109 GLN110 PHE111 VAL112 TYR113 LEU114 GLU115 SER116 ASP117 TYR118 SER119 LYS120 LEU121 TRP122 ARG123 TYR124 SER125 TYR126 THR127 ALA128 THR129 TYR130 TYR131 ILE132 TYR133 ASP134 LEU135 SER136 ASN137 GLY138 GLU139 PHE140 VAL141 ARG142 GLY143 ASN144 GLU145 LEU146 PRO147 ARG148 PRO149 ILE150 GLN151 TYR152 LEU153 CYS154 TRP155 SER156 PRO157 VAL158 GLY159 SER160 LYS161 LEU162 ALA163 TYR164 VAL165 TYR166 GLN167 ASN168 ASN169 ILE170 TYR171 LEU172 LYS173 GLN174 ARG175 PRO176 GLY177 ASP178 PRO179 PRO180 PHE181 GLN182 ILE183 THR184 PHE185 ASN186 GLY187 ARG188 GLU189 ASN190 LYS191 ILE192 PHE193 ASN194 GLY195 ILE196 PRO197 ASP198 TRP199 VAL200 TYR201 GLU202 GLU203 GLU204 MET205 LEU206 ALA207 THR208 LYS209 TYR210 ALA211 LEU212 TRP213 TRP214 SER215 PRO216 ASN217 GLY218 LYS219 PHE220 LEU221 ALA222 TYR223 ALA224 GLU225 PHE226 ASN227 ASP228 THR229 ASP230 ILE231 PRO232 VAL233 ILE234 ALA235 TYR236 SER237 TYR238 TYR239 GLY240 ASP241 GLU242 GLN243 TYR244 PRO245 ARG246 THR247 ILE248 ASN249 ILE250 PRO251 TYR252 PRO253 LYS254 ALA255 GLY256 ALA257 LYS258 ASN259 PRO260 VAL261 VAL262 ARG263 ILE264 PHE265 ILE266 ILE267 ASP268 THR269 THR270 TYR271 PRO272 ALA273 TYR274 VAL275 GLY276 PRO277 GLN278 GLU279 VAL280 PRO281 VAL282 PRO283 ALA284 MET285 ILE286 ALA287 SER288 SER289 ASP290 TYR291 TYR292 PHE293 SER294 TRP295 LEU296 THR297 TRP298 VAL299 THR300 ASP301 GLU302 ARG303 VAL304 CYS305 LEU306 GLN307 TRP308 LEU309 LYS310 ARG311 VAL312 GLN313 ASN314 VAL315 SER316 VAL317 LEU318 SER319 ILE320 CYS321 ASP322 PHE323 ARG324 GLU325 ASP326 TRP327 GLN328 THR329 TRP330 ASP331 CYS332 PRO333 LYS334 THR335 GLN336 GLU337 HIS338 ILE339 GLU340 GLU341 SER342 ARG343 THR344 GLY345 TRP346 ALA347 GLY348 GLY349 PHE350 PHE351 VAL352 SER353 THR354 PRO355 VAL356 PHE357 SER358 TYR359 ASP360 ALA361 ILE362 SER363 TYR364 TYR365 LYS366 ILE367 PHE368 SER369 ASP370 LYS371 ASP372 GLY373 TYR374 LYS375 HIS376 ILE377 HIS378 TYR379 ILE380 LYS381 ASP382 THR383 VAL384 GLU385 ASN386 ALA387 ILE388 GLN389 ILE390 THR391 SER392 GLY393 LYS394 TRP395 GLU396 ALA397 ILE398 ASN399 ILE400 PHE401 ARG402 VAL403 THR404 GLN405 ASP406 SER407 LEU408 PHE409 TYR410 SER411 SER412 ASN413 GLU414 PHE415 GLU416 GLU417 TYR418 PRO419 GLY420 ARG421 ARG422 ASN423 ILE424 TYR425 ARG426 ILE427 SER428 ILE429 GLY430 SER431 TYR432 PRO433 PRO434 SER435 LYS436 LYS437 CYS438 VAL439 THR440 CYS441 HIS442 LEU443 ARG444 LYS445 GLU446 ARG447 CYS448 GLN449 TYR450 TYR451 THR452 ALA453 SER454 PHE455 SER456 ASP457 TYR458 ALA459 LYS460 TYR461 TYR462 ALA463 LEU464 VAL465 CYS466 TYR467 GLY468 PRO469 GLY470 ILE471 PRO472 ILE473 SER474 THR475 LEU476 HIS477 ASP478 GLY479 ARG480 THR481 ASP482 GLN483 GLU484 ILE485 LYS486 ILE487 LEU488 GLU489 GLU490 ASN491 LYS492 GLU493 LEU494 GLU495 ASN496 ALA497 LEU498 LYS499 ASN500 ILE501 GLN502 LEU503 PRO504 LYS505 GLU506 GLU507 ILE508 LYS509 LYS510 LEU511 GLU512 VAL513 ASP514 GLU515 ILE516 THR517 LEU518 TRP519 TYR520 LYS521 MET522 ILE523 LEU524 PRO525 PRO526 GLN527 PHE528 ASP529 ARG530 SER531 LYS532 LYS533 TYR534 PRO535 LEU536 LEU537 ILE538 GLN539 VAL540 TYR541 GLY542 GLY543 PRO544 CYS545 SER546 GLN547 SER548 VAL549 ARG550 SER551 VAL552 PHE553 ALA554 VAL555 ASN556 TRP557 ILE558 SER559 TYR560 LEU561 ALA562 SER563 LYS564 GLU565 GLY566 MET567 VAL568 ILE569 ALA570 LEU571 VAL572 ASP573 GLY574 ARG575 GLY576 THR577 ALA578 PHE579 GLN580 GLY581 ASP582 LYS583 LEU584 LEU585 TYR586 ALA587 VAL588 TYR589 ARG590 LYS591 LEU592 GLY593 VAL594 TYR595 GLU596 VAL597 GLU598 ASP599 GLN600 ILE601 THR602 ALA603 VAL604 ARG605 LYS606 PHE607 ILE608 GLU609 MET610 GLY611 PHE612 ILE613 ASP614 GLU615 LYS616 ARG617 ILE618 ALA619 ILE620 TRP621 GLY622 TRP623 SER624 TYR625 GLY626 GLY627 TYR628 VAL629 SER630 SER631 LEU632 ALA633 LEU634 ALA635 SER636 GLY637 THR638 GLY639 LEU640 PHE641 LYS642 CYS643 GLY644 ILE645 ALA646 VAL647 ALA648 PRO649 VAL650 SER651 SER652 TRP653 GLU654 TYR655 TYR656 ALA657 SER658 VAL659 TYR660 THR661 GLU662 ARG663 PHE664 MET665 GLY666 LEU667 PRO668 THR669 LYS670 ASP671 ASP672 ASN673 LEU674 GLU675 HIS676 TYR677 LYS678 ASN679 SER680 THR681 VAL682 MET683 ALA684 ARG685 ALA686 GLU687 TYR688 PHE689 ARG690 ASN691 VAL692 ASP693 TYR694 LEU695 LEU696 ILE697 HIS698 GLY699 THR700 ALA701 ASP702 ASP703 ASN704 VAL705 HIS706 PHE707 GLN708 ASN709 SER710 ALA711 GLN712 ILE713 ALA714 LYS715 ALA716 LEU717 VAL718 ASN719 ALA720 GLN721 VAL722 ASP723 PHE724 GLN725 ALA726 MET727 TRP728 TYR729 SER730 ASP731 GLN732 ASN733 HIS734 GLY735 LEU736 SER737 GLY738 LEU739 SER740 THR741 ASN742 HIS743 LEU744 TYR745 THR746 HIS747 MET748 THR749 HIS750 PHE751 LEU752 LYS753 GLN754 CYS755 PHE756 SER757
Unit 2 MET39 ARG40 ALA41 LEU42 THR43 LEU44 LYS45 ASP46 ILE47 LEU48 ASN49 GLY50 THR51 PHE52 SER53 TYR54 LYS55 THR56 PHE57 PHE58 PRO59 ASN60 TRP61 ILE62 SER63 GLY64 GLN65 GLU66 TYR67 LEU68 HIS69 GLN70 SER71 ALA72 ASP73 ASN74 ASN75 ILE76 VAL77 LEU78 TYR79 ASN80 ILE81 GLU82 THR83 GLY84 GLN85 SER86 TYR87 THR88 ILE89 LEU90 SER91 ASN92 ARG93 THR94 MET95 LYS96 SER97 VAL98 ASN99 ALA100 SER101 ASN102 TYR103 GLY104 LEU105 SER106 PRO107 ASP108 ARG109 GLN110 PHE111 VAL112 TYR113 LEU114 GLU115 SER116 ASP117 TYR118 SER119 LYS120 LEU121 TRP122 ARG123 TYR124 SER125 TYR126 THR127 ALA128 THR129 TYR130 TYR131 ILE132 TYR133 ASP134 LEU135 SER136 ASN137 GLY138 GLU139 PHE140 VAL141 ARG142 GLY143 ASN144 GLU145 LEU146 PRO147 ARG148 PRO149 ILE150 GLN151 TYR152 LEU153 CYS154 TRP155 SER156 PRO157 VAL158 GLY159 SER160 LYS161 LEU162 ALA163 TYR164 VAL165 TYR166 GLN167 ASN168 ASN169 ILE170 TYR171 LEU172 LYS173 GLN174 ARG175 PRO176 GLY177 ASP178 PRO179 PRO180 PHE181 GLN182 ILE183 THR184 PHE185 ASN186 GLY187 ARG188 GLU189 ASN190 LYS191 ILE192 PHE193 ASN194 GLY195 ILE196 PRO197 ASP198 TRP199 VAL200 TYR201 GLU202 GLU203 GLU204 MET205 LEU206 ALA207 THR208 LYS209 TYR210 ALA211 LEU212 TRP213 TRP214 SER215 PRO216 ASN217 GLY218 LYS219 PHE220 LEU221 ALA222 TYR223 ALA224 GLU225 PHE226 ASN227 ASP228 THR229 ASP230 ILE231 PRO232 VAL233 ILE234 ALA235 TYR236 SER237 TYR238 TYR239 GLY240 ASP241 GLU242 GLN243 TYR244 PRO245 ARG246 THR247 ILE248 ASN249 ILE250 PRO251 TYR252 PRO253 LYS254 ALA255 GLY256 ALA257 LYS258 ASN259 PRO260 VAL261 VAL262 ARG263 ILE264 PHE265 ILE266 ILE267 ASP268 THR269 THR270 TYR271 PRO272 ALA273 TYR274 VAL275 GLY276 PRO277 GLN278 GLU279 VAL280 PRO281 VAL282 PRO283 ALA284 MET285 ILE286 ALA287 SER288 SER289 ASP290 TYR291 TYR292 PHE293 SER294 TRP295 LEU296 THR297 TRP298 VAL299 THR300 ASP301 GLU302 ARG303 VAL304 CYS305 LEU306 GLN307 TRP308 LEU309 LYS310 ARG311 VAL312 GLN313 ASN314 VAL315 SER316 VAL317 LEU318 SER319 ILE320 CYS321 ASP322 PHE323 ARG324 GLU325 ASP326 TRP327 GLN328 THR329 TRP330 ASP331 CYS332 PRO333 LYS334 THR335 GLN336 GLU337 HIS338 ILE339 GLU340 GLU341 SER342 ARG343 THR344 GLY345 TRP346 ALA347 GLY348 GLY349 PHE350 PHE351 VAL352 SER353 THR354 PRO355 VAL356 PHE357 SER358 TYR359 ASP360 ALA361 ILE362 SER363 TYR364 TYR365 LYS366 ILE367 PHE368 SER369 ASP370 LYS371 ASP372 GLY373 TYR374 LYS375 HIS376 ILE377 HIS378 TYR379 ILE380 LYS381 ASP382 THR383 VAL384 GLU385 ASN386 ALA387 ILE388 GLN389 ILE390 THR391 SER392 GLY393 LYS394 TRP395 GLU396 ALA397 ILE398 ASN399 ILE400 PHE401 ARG402 VAL403 THR404 GLN405 ASP406 SER407 LEU408 PHE409 TYR410 SER411 SER412 ASN413 GLU414 PHE415 GLU416 GLU417 TYR418 PRO419 GLY420 ARG421 ARG422 ASN423 ILE424 TYR425 ARG426 ILE427 SER428 ILE429 GLY430 SER431 TYR432 PRO433 PRO434 SER435 LYS436 LYS437 CYS438 VAL439 THR440 CYS441 HIS442 LEU443 ARG444 LYS445 GLU446 ARG447 CYS448 GLN449 TYR450 TYR451 THR452 ALA453 SER454 PHE455 SER456 ASP457 TYR458 ALA459 LYS460 TYR461 TYR462 ALA463 LEU464 VAL465 CYS466 TYR467 GLY468 PRO469 GLY470 ILE471 PRO472 ILE473 SER474 THR475 LEU476 HIS477 ASP478 GLY479 ARG480 THR481 ASP482 GLN483 GLU484 ILE485 LYS486 ILE487 LEU488 GLU489 GLU490 ASN491 LYS492 GLU493 LEU494 GLU495 ASN496 ALA497 LEU498 LYS499 ASN500 ILE501 GLN502 LEU503 PRO504 LYS505 GLU506 GLU507 ILE508 LYS509 LYS510 LEU511 GLU512 VAL513 ASP514 GLU515 ILE516 THR517 LEU518 TRP519 TYR520 LYS521 MET522 ILE523 LEU524 PRO525 PRO526 GLN527 PHE528 ASP529 ARG530 SER531 LYS532 LYS533 TYR534 PRO535 LEU536 LEU537 ILE538 GLN539 VAL540 TYR541 GLY542 GLY543 PRO544 CYS545 SER546 GLN547 SER548 VAL549 ARG550 SER551 VAL552 PHE553 ALA554 VAL555 ASN556 TRP557 ILE558 SER559 TYR560 LEU561 ALA562 SER563 LYS564 GLU565 GLY566 MET567 VAL568 ILE569 ALA570 LEU571 VAL572 ASP573 GLY574 ARG575 GLY576 THR577 ALA578 PHE579 GLN580 GLY581 ASP582 LYS583 LEU584 LEU585 TYR586 ALA587 VAL588 TYR589 ARG590 LYS591 LEU592 GLY593 VAL594 TYR595 GLU596 VAL597 GLU598 ASP599 GLN600 ILE601 THR602 ALA603 VAL604 ARG605 LYS606 PHE607 ILE608 GLU609 MET610 GLY611 PHE612 ILE613 ASP614 GLU615 LYS616 ARG617 ILE618 ALA619 ILE620 TRP621 GLY622 TRP623 SER624 TYR625 GLY626 GLY627 TYR628 VAL629 SER630 SER631 LEU632 ALA633 LEU634 ALA635 SER636 GLY637 THR638 GLY639 LEU640 PHE641 LYS642 CYS643 GLY644 ILE645 ALA646 VAL647 ALA648 PRO649 VAL650 SER651 SER652 TRP653 GLU654 TYR655 TYR656 ALA657 SER658 VAL659 TYR660 THR661 GLU662 ARG663 PHE664 MET665 GLY666 LEU667 PRO668 THR669 LYS670 ASP671 ASP672 ASN673 LEU674 GLU675 HIS676 TYR677 LYS678 ASN679 SER680 THR681 VAL682 MET683 ALA684 ARG685 ALA686 GLU687 TYR688 PHE689 ARG690 ASN691 VAL692 ASP693 TYR694 LEU695 LEU696 ILE697 HIS698 GLY699 THR700 ALA701 ASP702 ASP703 ASN704 VAL705 HIS706 PHE707 GLN708 ASN709 SER710 ALA711 GLN712 ILE713 ALA714 LYS715 ALA716 LEU717 VAL718 ASN719 ALA720 GLN721 VAL722 ASP723 PHE724 GLN725 ALA726 MET727 TRP728 TYR729 SER730 ASP731 GLN732 ASN733 HIS734 GLY735 LEU736 SER737 GLY738 LEU739 SER740 THR741 ASN742 HIS743 LEU744 TYR745 THR746 HIS747 MET748 THR749 HIS750 PHE751 LEU752 LYS753 GLN754 CYS755 PHE756 SER757
Ligands
Unit 3 NAG1 NAG2
Unit 4 NAG1 NAG2
Unit 5 NAG1 NAG2
Unit 6 NAG3141 NAG4901
Unit 7 NAG2271 NAG3141 NAG4901 NAG6791
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany