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(-) Description

Title :  G PROTEIN-COUPLED RECEPTOR KINASE 2 (GRK2)
 
Authors :  D. T. Lodowski, J. F. Barnhill, R. M. Pyskadlo, R. Ghirlando, R. Sterne- J. J. G. Tesmer
Date :  20 Jan 05  (Deposition) - 05 Jul 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  4.50
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  G Protein, Kinase, Gpcr, Grk2, Beta-Ark1, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. T. Lodowski, J. F. Barnhill, R. M. Pyskadlo, R. Ghirlando, R. Sterne-Marr, J. J. G. Tesmer
The Role Of Gbetagamma And Domain Interfaces In The Activation Of G Protein-Coupled Receptor Kinase 2
Biochemistry V. 44 6958 2005
PubMed-ID: 15865441  |  Reference-DOI: 10.1021/BI050119Q

(-) Compounds

Molecule 1 - BETA-ADRENERGIC RECEPTOR KINASE 1
    Chains: A, B, C, D
    EC Number: 2.7.1.126
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF9
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Gene: ADRBK1, GRK2
    Mutation: YES
    Organism Common: CATTLE
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: BETA-ARK-1, G- PROTEIN COUPLED RECEPTOR KINASE 2

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1YM7)

(-) Sites  (0, 0)

(no "Site" information available for 1YM7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1YM7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1YM7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1YM7)

(-) PROSITE Motifs  (5, 20)

Asymmetric Unit (5, 20)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RGSPS50132 RGS domain profile.ARBK1_BOVIN54-175
 
 
 		  4A:54-175
B:54-175
C:54-175
D:54-175
2PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.ARBK1_BOVIN197-220
 
 
 		  4A:197-220
B:197-220
C:197-220
D:197-220
3PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.ARBK1_BOVIN313-325
 
 
 		  4A:313-325
B:313-325
C:313-325
D:313-325
4AGC_KINASE_CTERPS51285 AGC-kinase C-terminal domain profile.ARBK1_BOVIN454-521
 
 
 		  4A:454-521
B:454-521
C:454-521
D:454-521
5PH_DOMAINPS50003 PH domain profile.ARBK1_BOVIN558-652
 
 
 		  4A:558-652
B:558-652
C:558-652
D:558-652
Biological Unit 1 (5, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RGSPS50132 RGS domain profile.ARBK1_BOVIN54-175
 
 
 		  1A:54-175
-
-
-
2PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.ARBK1_BOVIN197-220
 
 
 		  1A:197-220
-
-
-
3PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.ARBK1_BOVIN313-325
 
 
 		  1A:313-325
-
-
-
4AGC_KINASE_CTERPS51285 AGC-kinase C-terminal domain profile.ARBK1_BOVIN454-521
 
 
 		  1A:454-521
-
-
-
5PH_DOMAINPS50003 PH domain profile.ARBK1_BOVIN558-652
 
 
 		  1A:558-652
-
-
-
Biological Unit 2 (5, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RGSPS50132 RGS domain profile.ARBK1_BOVIN54-175
 
 
 		  1-
B:54-175
-
-
2PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.ARBK1_BOVIN197-220
 
 
 		  1-
B:197-220
-
-
3PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.ARBK1_BOVIN313-325
 
 
 		  1-
B:313-325
-
-
4AGC_KINASE_CTERPS51285 AGC-kinase C-terminal domain profile.ARBK1_BOVIN454-521
 
 
 		  1-
B:454-521
-
-
5PH_DOMAINPS50003 PH domain profile.ARBK1_BOVIN558-652
 
 
 		  1-
B:558-652
-
-
Biological Unit 3 (5, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RGSPS50132 RGS domain profile.ARBK1_BOVIN54-175
 
 
 		  1-
-
C:54-175
-
2PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.ARBK1_BOVIN197-220
 
 
 		  1-
-
C:197-220
-
3PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.ARBK1_BOVIN313-325
 
 
 		  1-
-
C:313-325
-
4AGC_KINASE_CTERPS51285 AGC-kinase C-terminal domain profile.ARBK1_BOVIN454-521
 
 
 		  1-
-
C:454-521
-
5PH_DOMAINPS50003 PH domain profile.ARBK1_BOVIN558-652
 
 
 		  1-
-
C:558-652
-
Biological Unit 4 (5, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RGSPS50132 RGS domain profile.ARBK1_BOVIN54-175
 
 
 		  1-
-
-
D:54-175
2PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.ARBK1_BOVIN197-220
 
 
 		  1-
-
-
D:197-220
3PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.ARBK1_BOVIN313-325
 
 
 		  1-
-
-
D:313-325
4AGC_KINASE_CTERPS51285 AGC-kinase C-terminal domain profile.ARBK1_BOVIN454-521
 
 
 		  1-
-
-
D:454-521
5PH_DOMAINPS50003 PH domain profile.ARBK1_BOVIN558-652
 
 
 		  1-
-
-
D:558-652

(-) Exons   (0, 0)

(no "Exon" information available for 1YM7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:608
 aligned with ARBK1_BOVIN | P21146 from UniProtKB/Swiss-Prot  Length:689

    Alignment length:628
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648        
          ARBK1_BOVIN    29 SKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 656
               SCOP domains d1ym7a1 A:29-185 G-protein coupled receptor kinase 2, N-terminal domain                                                                                      d1ym7a3 A:186-549 G-protein coupled receptor kinase 2                                                                                                                                                                                                                                                                                                                       d1ym7a2 A:550-656 G-p   rotein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)                SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeee........eeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhhh.........eeeeeee..eeeeeee.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee................hhhhhh......hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh........hhhhhhhhhhhh.............hhhhhhhhhhhh..hhhhhhh............-----------------.........hhhhh....eehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.................eeeeee.---.eeeeeeeeee..eeeee.......ee.......eeeee......eeeee.....eeeee..hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------RGS  PDB: A:54-175 UniProt: 54-175                                                                                        ---------------------PROTEIN_KINASE_ATP      --------------------------------------------------------------------------------------------PROTEIN_KINAS--------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: A:454-521 UniProt: 454-521                    ------------------------------------PH_DOMAIN  PDB: A:558-652 UniProt: 558-652                                                     ---- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ym7 A  29 SKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRG-----------------TKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDCIMHGYMSKMGN---TQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 656
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      |  -         -    |  498       508       518       528       538       548       558       568 |   | 578       588       598       608       618       628       638       648        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        475               493                                                                          570 574                                                                                  


Chain B from PDB  Type:PROTEIN  Length:608
 aligned with ARBK1_BOVIN | P21146 from UniProtKB/Swiss-Prot  Length:689

    Alignment length:628
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648        
          ARBK1_BOVIN    29 SKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 656
               SCOP domains d1ym7b1 B:29-185 G-protein coupled receptor kinase 2, N-terminal domain                                                                                      d1ym7b3 B:186-549 G-protein coupled receptor kinase 2                                                                                                                                                                                                                                                                                                                       d1ym7b2 B:550-656 G-p   rotein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)                SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeeeee....eeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhhh.........eeeeeee..eeeeeee.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee................hhhhhh......hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh........hhhhhhhhhhhh.............hhhhhhhhhhhh..hhhhhhh............-----------------......hhhhhh......eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................eeeeeeeee.---.eeeeeeeeee..eeeee.......ee.....eeeeeee......eeeeee....eeee...hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------RGS  PDB: B:54-175 UniProt: 54-175                                                                                        ---------------------PROTEIN_KINASE_ATP      --------------------------------------------------------------------------------------------PROTEIN_KINAS--------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: B:454-521 UniProt: 454-521                    ------------------------------------PH_DOMAIN  PDB: B:558-652 UniProt: 558-652                                                     ---- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ym7 B  29 SKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRG-----------------TKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDCIMHGYMSKMGN---TQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 656
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      |  -         -    |  498       508       518       528       538       548       558       568 |   | 578       588       598       608       618       628       638       648        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        475               493                                                                          570 574                                                                                  


Chain C from PDB  Type:PROTEIN  Length:607
 aligned with ARBK1_BOVIN | P21146 from UniProtKB/Swiss-Prot  Length:689

    Alignment length:628
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648        
          ARBK1_BOVIN    29 SKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 656
               SCOP domains d1ym7c1 C:29-185 G-protein coupled receptor kinase 2, N-terminal domain                                                                                      d1ym7c3 C:186-549 G-protein coupled receptor kinase 2                                                                                                                                                                                                                                                                                                                       d1ym7c2 C:550-656 G-p   rotein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)                SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeeeee....eeeeeee.....eeeeeeeehhhhhhhhhhhhhhhhhhhhhhhh.........eeeeeee..eeeeeee.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee................hhhhhh......hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh........hhhhhhhhhhhh.............hhhhhhhhhhhh..hhhhhhh............------------------.....hhhhhh......eehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................eeeeeeeee.---.eeeeeeeeee..eeeee.......ee.....eeeeeee......eeeeee....eeee...hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------RGS  PDB: C:54-175 UniProt: 54-175                                                                                        ---------------------PROTEIN_KINASE_ATP      --------------------------------------------------------------------------------------------PROTEIN_KINAS--------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: C:454-521 UniProt: 454-521                    ------------------------------------PH_DOMAIN  PDB: C:558-652 UniProt: 558-652                                                     ---- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ym7 C  29 SKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRG------------------KGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDCIMHGYMSKMGN---TQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 656
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      |  -         -     | 498       508       518       528       538       548       558       568 |   | 578       588       598       608       618       628       638       648        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        475                494                                                                         570 574                                                                                  


Chain D from PDB  Type:PROTEIN  Length:599
 aligned with ARBK1_BOVIN | P21146 from UniProtKB/Swiss-Prot  Length:689

    Alignment length:628
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648        
          ARBK1_BOVIN    29 SKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 656
               SCOP domains d1ym7d1 D:29-185 G-protein coupled receptor kinase 2, N-terminal domain                                                                                      d1ym7d3 D:186-542 G-protein coupled receptor kinase 2                                                                                                                                                                                                                                                                                                                         d1ym7d2 D:552-656 G   -protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------------------------RGS-1ym7D09 D:54-174                                                                                                     ----------------Pkinase-1ym7D05 D:191-453                                                                                                                                                                                                                                              ----------------------                 --------------------------------------------------         -------PH-1ym7D01 D   :559-652                                                                       ---- Pfam domains (1)
           Pfam domains (2) -------------------------RGS-1ym7D10 D:54-174                                                                                                     ----------------Pkinase-1ym7D06 D:191-453                                                                                                                                                                                                                                              ----------------------                 --------------------------------------------------         -------PH-1ym7D02 D   :559-652                                                                       ---- Pfam domains (2)
           Pfam domains (3) -------------------------RGS-1ym7D11 D:54-174                                                                                                     ----------------Pkinase-1ym7D07 D:191-453                                                                                                                                                                                                                                              ----------------------                 --------------------------------------------------         -------PH-1ym7D03 D   :559-652                                                                       ---- Pfam domains (3)
           Pfam domains (4) -------------------------RGS-1ym7D12 D:54-174                                                                                                     ----------------Pkinase-1ym7D08 D:191-453                                                                                                                                                                                                                                              ----------------------                 --------------------------------------------------         -------PH-1ym7D04 D   :559-652                                                                       ---- Pfam domains (4)
         Sec.struct. author .......hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeeeee....eeeeeee.....eeeeeeeehhhhhhhhhhhhhhhhhhhhhhhh.........eeeeeee..eeeeeee.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee................hhhhhh......hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh........hhhhhhhhhhhh.............hhhhhhhhhhhh..hhhhhhh............-----------------.........hhhhh....eehhhhhhhhhhhhhhhhhhhhhhhhhhh...---------.........eeeeeeeee.---.eeeeeeeeee..eeeee.......ee.......eeeee......eeeee.....eeee...hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------RGS  PDB: D:54-175 UniProt: 54-175                                                                                        ---------------------PROTEIN_KINASE_ATP      --------------------------------------------------------------------------------------------PROTEIN_KINAS--------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: D:454-521 UniProt: 454-521                    ------------------------------------PH_DOMAIN  PDB: D:558-652 UniProt: 558-652                                                     ---- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ym7 D  29 SKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRG-----------------TKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKT---------DYALGKDCIMHGYMSKMGN---TQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 656
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      |  -         -    |  498       508       518       528       538   |     -   |   558       568 |   | 578       588       598       608       618       628       638       648        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        475               493                                              542       552               570 574
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 12)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1YM7)

(-) Pfam Domains  (3, 12)

Asymmetric Unit
(-)
Clan: PH (111)
(-)
Family: PH (71)
(-)
Bos taurus (Bovine) (5)
1aPH-1ym7D01D:559-652
1bPH-1ym7D02D:559-652
1cPH-1ym7D03D:559-652
1dPH-1ym7D04D:559-652
(-)
Clan: PKinase (934)
(-)
Family: Pkinase (680)
(-)
Bos taurus (Bovine) (47)
2aPkinase-1ym7D05D:191-453
2bPkinase-1ym7D06D:191-453
2cPkinase-1ym7D07D:191-453
2dPkinase-1ym7D08D:191-453
(-)
Clan: RGS (17)
(-)
Family: RGS (16)
(-)
Bos taurus (Bovine) (6)
3aRGS-1ym7D09D:54-174
3bRGS-1ym7D10D:54-174
3cRGS-1ym7D11D:54-174
3dRGS-1ym7D12D:54-174

(-) Gene Ontology  (28, 28)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (ARBK1_BOVIN | P21146)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0031755    Edg-2 lysophosphatidic acid receptor binding    Interacting selectively and non-covalently with an Edg-2 lysophosphatidic acid receptor.
    GO:0004703    G-protein coupled receptor kinase activity    Catalysis of the reaction: ATP + G-protein coupled receptor = ADP + G-protein coupled receptor phosphate.
    GO:0031694    alpha-2A adrenergic receptor binding    Interacting selectively and non-covalently with an alpha-2A adrenergic receptor.
    GO:0047696    beta-adrenergic receptor kinase activity    Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004672    protein kinase activity    Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
    GO:0004674    protein serine/threonine kinase activity    Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0007213    G-protein coupled acetylcholine receptor signaling pathway    Any series of molecular signals initiated by an acetylcholine receptor on the surface of the target cell binding to one of its physiological ligands, and proceeding with the activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction and ends with regulation of a downstream cellular process, e.g. transcription.
    GO:0002031    G-protein coupled receptor internalization    The process that results in the uptake of a G-protein coupled receptor into an endocytic vesicle.
    GO:0007186    G-protein coupled receptor signaling pathway    A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576).
    GO:0060048    cardiac muscle contraction    Muscle contraction of cardiac muscle tissue.
    GO:0002029    desensitization of G-protein coupled receptor protein signaling pathway    The process that stops, prevents, or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity after prolonged stimulation with an agonist of the pathway.
    GO:0006886    intracellular protein transport    The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
    GO:0045988    negative regulation of striated muscle contraction    Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle contraction.
    GO:0003108    negative regulation of the force of heart contraction by chemical signal    Any process which decreases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.
    GO:0018105    peptidyl-serine phosphorylation    The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
    GO:0009966    regulation of signal transduction    Any process that modulates the frequency, rate or extent of signal transduction.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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  ARBK1_BOVIN | P21146
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  2.7.1.126
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ARBK1_BOVIN | P21146: 1omw 2bcj 3psc 3pvu 3pvw 3uzs 3uzt 5he0 5he2 5he3 5ukm

(-) Related Entries Specified in the PDB File

1omw STRUCTURE OF GRK2 IN COMPLEX WITH HETEROTRIMERIC G BETA GAMMA SUBUNITS