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1YM7
Biol. Unit 2
Info
Asym.Unit (352 KB)
Biol.Unit 1 (90 KB)
Biol.Unit 2 (90 KB)
Biol.Unit 3 (90 KB)
Biol.Unit 4 (89 KB)
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(1)
Title
:
G PROTEIN-COUPLED RECEPTOR KINASE 2 (GRK2)
Authors
:
D. T. Lodowski, J. F. Barnhill, R. M. Pyskadlo, R. Ghirlando, R. Sterne- J. J. G. Tesmer
Date
:
20 Jan 05 (Deposition) - 05 Jul 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
4.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
G Protein, Kinase, Gpcr, Grk2, Beta-Ark1, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. T. Lodowski, J. F. Barnhill, R. M. Pyskadlo, R. Ghirlando, R. Sterne-Marr, J. J. G. Tesmer
The Role Of Gbetagamma And Domain Interfaces In The Activation Of G Protein-Coupled Receptor Kinase 2
Biochemistry V. 44 6958 2005
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(5, 5)
Info
All PROSITE Patterns/Profiles
1: RGS (B:54-175)
2: PROTEIN_KINASE_ATP (B:197-220)
3: PROTEIN_KINASE_ST (B:313-325)
4: AGC_KINASE_CTER (B:454-521)
5: PH_DOMAIN (B:558-652)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RGS
PS50132
RGS domain profile.
ARBK1_BOVIN
54-175
1
-
B:54-175
-
-
2
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
ARBK1_BOVIN
197-220
1
-
B:197-220
-
-
3
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
ARBK1_BOVIN
313-325
1
-
B:313-325
-
-
4
AGC_KINASE_CTER
PS51285
AGC-kinase C-terminal domain profile.
ARBK1_BOVIN
454-521
1
-
B:454-521
-
-
5
PH_DOMAIN
PS50003
PH domain profile.
ARBK1_BOVIN
558-652
1
-
B:558-652
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 12)
Info
All SCOP Domains
1a: SCOP_d1ym7a1 (A:29-185)
1b: SCOP_d1ym7b1 (B:29-185)
1c: SCOP_d1ym7c1 (C:29-185)
1d: SCOP_d1ym7d1 (D:29-185)
2a: SCOP_d1ym7a2 (A:550-656)
2b: SCOP_d1ym7b2 (B:550-656)
2c: SCOP_d1ym7c2 (C:550-656)
2d: SCOP_d1ym7d2 (D:552-656)
3a: SCOP_d1ym7a3 (A:186-549)
3b: SCOP_d1ym7b3 (B:186-549)
3c: SCOP_d1ym7c3 (C:186-549)
3d: SCOP_d1ym7d3 (D:186-542)
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Class
:
All alpha proteins
(14657)
Fold
:
Regulator of G-protein signaling, RGS
(52)
Superfamily
:
Regulator of G-protein signaling, RGS
(52)
Family
:
Regulator of G-protein signaling, RGS
(27)
Protein domain
:
G-protein coupled receptor kinase 2, N-terminal domain
(6)
Cow (Bos taurus) [TaxId: 9913]
(6)
1a
d1ym7a1
A:29-185
1b
d1ym7b1
B:29-185
1c
d1ym7c1
C:29-185
1d
d1ym7d1
D:29-185
Class
:
All beta proteins
(24004)
Fold
:
PH domain-like barrel
(258)
Superfamily
:
PH domain-like
(257)
Family
:
Pleckstrin-homology domain (PH domain)
(102)
Protein domain
:
G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
(7)
Cow (Bos taurus) [TaxId: 9913]
(6)
2a
d1ym7a2
A:550-656
2b
d1ym7b2
B:550-656
2c
d1ym7c2
C:550-656
2d
d1ym7d2
D:552-656
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
G-protein coupled receptor kinase 2
(6)
Cow (Bos taurus) [TaxId: 9913]
(6)
3a
d1ym7a3
A:186-549
3b
d1ym7b3
B:186-549
3c
d1ym7c3
C:186-549
3d
d1ym7d3
D:186-542
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CATH Domains
(0, 0)
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Pfam Domains
(3, 12)
Info
all PFAM domains
1a: PFAM_PH_1ym7D01 (D:559-652)
1b: PFAM_PH_1ym7D02 (D:559-652)
1c: PFAM_PH_1ym7D03 (D:559-652)
1d: PFAM_PH_1ym7D04 (D:559-652)
2a: PFAM_Pkinase_1ym7D05 (D:191-453)
2b: PFAM_Pkinase_1ym7D06 (D:191-453)
2c: PFAM_Pkinase_1ym7D07 (D:191-453)
2d: PFAM_Pkinase_1ym7D08 (D:191-453)
3a: PFAM_RGS_1ym7D09 (D:54-174)
3b: PFAM_RGS_1ym7D10 (D:54-174)
3c: PFAM_RGS_1ym7D11 (D:54-174)
3d: PFAM_RGS_1ym7D12 (D:54-174)
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Clan
:
PH
(111)
Family
:
PH
(71)
Bos taurus (Bovine)
(5)
1a
PH-1ym7D01
D:559-652
1b
PH-1ym7D02
D:559-652
1c
PH-1ym7D03
D:559-652
1d
PH-1ym7D04
D:559-652
Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Bos taurus (Bovine)
(47)
2a
Pkinase-1ym7D05
D:191-453
2b
Pkinase-1ym7D06
D:191-453
2c
Pkinase-1ym7D07
D:191-453
2d
Pkinase-1ym7D08
D:191-453
Clan
:
RGS
(17)
Family
:
RGS
(16)
Bos taurus (Bovine)
(6)
3a
RGS-1ym7D09
D:54-174
3b
RGS-1ym7D10
D:54-174
3c
RGS-1ym7D11
D:54-174
3d
RGS-1ym7D12
D:54-174
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Chain B
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (352 KB)
Header - Asym.Unit
Biol.Unit 1 (90 KB)
Header - Biol.Unit 1
Biol.Unit 2 (90 KB)
Header - Biol.Unit 2
Biol.Unit 3 (90 KB)
Header - Biol.Unit 3
Biol.Unit 4 (89 KB)
Header - Biol.Unit 4
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