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(-)Asym./Biol. Unit
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Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF AGMATINASE REVEALS STRUCTURAL CONSERVATION AND INHIBITION MECHANISM OF THE UREOHYDROLASE SUPERFAMILY
 
Authors :  H. J. Ahn, K. H. Kim, J. Lee, J. -Y. Ha, H. H. Lee, D. Kim, H. -J. Yoon, A. - R. Kwon, S. W. Suh
Date :  18 Aug 04  (Deposition) - 07 Sep 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Alpha/Beta Fold, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. J. Ahn, K. H. Kim, J. Lee, J. -Y. Ha, H. H. Lee, D. Kim, H. -J. Yoon, A. -R. Kwon, S. W. Suh
Crystal Structure Of Agmatinase Reveals Structural Conservation And Inhibition Mechanism Of The Ureohydrolase Superfamily
J. Biol. Chem. V. 279 50505 2004
PubMed-ID: 15355972  |  Reference-DOI: 10.1074/JBC.M409246200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - AGMATINASE
    Chains: A, B, C, D, E, F
    EC Number: 3.5.3.11
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: DEINOCOCCUS RADIODURANS
    Organism Taxid: 1299

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1WOH)

(-) Sites  (0, 0)

(no "Site" information available for 1WOH)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WOH)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric/Biological Unit
No.Residues
1Pro A:64 -Pro A:65
2Gly A:118 -Gly A:119
3Pro B:64 -Pro B:65
4Gly B:118 -Gly B:119
5Pro C:64 -Pro C:65
6Gly C:118 -Gly C:119
7Pro D:64 -Pro D:65
8Gly D:118 -Gly D:119
9Pro E:64 -Pro E:65
10Gly E:118 -Gly E:119
11Pro F:64 -Pro F:65
12Gly F:118 -Gly F:119

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WOH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1WOH)

(-) Exons   (0, 0)

(no "Exon" information available for 1WOH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:303
 aligned with Q9RZ04_DEIRA | Q9RZ04 from UniProtKB/TrEMBL  Length:304

    Alignment length:303
                                                                                                                                                                                                                                                                                                                                       304 
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302 | 
         Q9RZ04_DEIRA     3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHV-   -
               SCOP domains d1woha_ A: Agmatinase                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1wohA00 A:3-305  [code=3.40.800.10, no name defined]                                                                                                                                                                                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhh..........eeeeeeee..........hhhhhhhhhhhhhh.....ee.....ee.....eeeeee......hhhhhhhhhhhhhhhhhh.eeeeeeee.hhhhhhhhhhhhh....eeeeee..................hhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhh..eeeehhhhhhhhhhhhh......eeeeeee.hhh................hhhhhhhhhhhhhhhheeeeeeee..hhhhh..hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1woh A   3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHVL 305
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302   


Chain B from PDB  Type:PROTEIN  Length:303
 aligned with Q9RZ04_DEIRA | Q9RZ04 from UniProtKB/TrEMBL  Length:304

    Alignment length:303
                                                                                                                                                                                                                                                                                                                                       304 
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302 | 
         Q9RZ04_DEIRA     3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHV-   -
               SCOP domains d1wohb_ B: Agmatinase                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1wohB00 B:3-305  [code=3.40.800.10, no name defined]                                                                                                                                                                                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhh..........eeeeeee...........hhhhhhhhhhhhhh.....ee.....ee.....eeeeee......hhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhh....eeeeee..................hhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhh..eeeehhhhhhhhhhhhh......eeeeeee.hhh................hhhhhhhhhhhhhhhheeeeeeee..hhhhh..hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1woh B   3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHVL 305
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302   


Chain C from PDB  Type:PROTEIN  Length:303
 aligned with Q9RZ04_DEIRA | Q9RZ04 from UniProtKB/TrEMBL  Length:304

    Alignment length:303
                                                                                                                                                                                                                                                                                                                                       304 
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302 | 
         Q9RZ04_DEIRA     3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHV-   -
               SCOP domains d1wohc_ C: Agmatinase                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1wohC00 C:3-305  [code=3.40.800.10, no name defined]                                                                                                                                                                                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhh..........eeeeeeee..........hhhhhhhhhhhhhh.....ee.....ee.....eeeeee......hhhhhhhhhhhhhhhhhhheeeeeeee.hhhhhhhhhhhhh....eeeeee..................hhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhh..eeeehhhhhhhhhhhhh......eeeeeee.hhh................hhhhhhhhhhhhhhhheeeeeeee..hhhhh..hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1woh C   3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHVL 305
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302   


Chain D from PDB  Type:PROTEIN  Length:303
 aligned with Q9RZ04_DEIRA | Q9RZ04 from UniProtKB/TrEMBL  Length:304

    Alignment length:303
                                                                                                                                                                                                                                                                                                                                       304 
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302 | 
         Q9RZ04_DEIRA     3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHV-   -
               SCOP domains d1wohd_ D: Agmatinase                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1wohD00 D:3-305  [code=3.40.800.10, no name defined]                                                                                                                                                                                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhh..........eeeeeeee..........hhhhhhhhhhhhhh.....ee.....ee.....eeeeee......hhhhhhhhhhhhhhhhhh.eeeeeeee.hhhhhhhhhhhhh....eeeeee..................hhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhh..eeeehhhhhhhhhhhhh......eeeeeee.hhh................hhhhhhhhhhhhhhh.eeeeeeee..hhhhh..hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1woh D   3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHVL 305
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302   


Chain E from PDB  Type:PROTEIN  Length:303
 aligned with Q9RZ04_DEIRA | Q9RZ04 from UniProtKB/TrEMBL  Length:304

    Alignment length:303
                                                                                                                                                                                                                                                                                                                                       304 
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302 | 
         Q9RZ04_DEIRA     3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHV-   -
               SCOP domains d1wohe_ E: Agmatinase                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1wohE00 E:3-305  [code=3.40.800.10, no name defined]                                                                                                                                                                                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhh..........eeeeeee...........hhhhhhhhhhhhhh.....ee.....ee.....eeeeee......hhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhh....eeeeee..................hhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhh..eeeehhhhhhhhhhhhh......eeeeeee.hhh................hhhhhhhhhhhhhhh.eeeeeeee..hhhhh..hhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1woh E   3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHVL 305
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302   


Chain F from PDB  Type:PROTEIN  Length:303
 aligned with Q9RZ04_DEIRA | Q9RZ04 from UniProtKB/TrEMBL  Length:304

    Alignment length:303
                                                                                                                                                                                                                                                                                                                                       304 
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302 | 
         Q9RZ04_DEIRA     3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHV-   -
               SCOP domains d1wohf_ F: Agmatinase                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1wohF00 F:3-305  [code=3.40.800.10, no name defined]                                                                                                                                                                                                                                                            CATH domains
           Pfam domains (1) --------------------------Arginase-1wohF01 F:29-298                                                                                                                                                                                                                                                     ------- Pfam domains (1)
           Pfam domains (2) --------------------------Arginase-1wohF02 F:29-298                                                                                                                                                                                                                                                     ------- Pfam domains (2)
           Pfam domains (3) --------------------------Arginase-1wohF03 F:29-298                                                                                                                                                                                                                                                     ------- Pfam domains (3)
           Pfam domains (4) --------------------------Arginase-1wohF04 F:29-298                                                                                                                                                                                                                                                     ------- Pfam domains (4)
           Pfam domains (5) --------------------------Arginase-1wohF05 F:29-298                                                                                                                                                                                                                                                     ------- Pfam domains (5)
           Pfam domains (6) --------------------------Arginase-1wohF06 F:29-298                                                                                                                                                                                                                                                     ------- Pfam domains (6)
         Sec.struct. author ...........hhhhh..........eeeeeeee..........hhhhhhhhhhhhhh.....ee.....ee.....eeeeee......hhhhhhhhhhhhhhhhhh.eeeeeeee.hhhhhhhhhhhhh....eeeeee..................hhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhh..eeeehhhhhhhhhhhhhh.....eeeeeee.hhh................hhhhhhhhhhhhhhhheeeeeeee..hhhhh..hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1woh F   3 GPAHLPYGGIPTFARAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVILPSLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPTGRSELLMARLVMETLCEVFDHVL 305
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Clan: Arginase (56)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Q9RZ04_DEIRA | Q9RZ04)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016813    hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines    Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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Asymmetric/Biological Unit
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  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 1woh)
 
  Sites
(no "Sites" information available for 1woh)
 
  Cis Peptide Bonds
    Gly A:118 - Gly A:119   [ RasMol ]  
    Gly B:118 - Gly B:119   [ RasMol ]  
    Gly C:118 - Gly C:119   [ RasMol ]  
    Gly D:118 - Gly D:119   [ RasMol ]  
    Gly E:118 - Gly E:119   [ RasMol ]  
    Gly F:118 - Gly F:119   [ RasMol ]  
    Pro A:64 - Pro A:65   [ RasMol ]  
    Pro B:64 - Pro B:65   [ RasMol ]  
    Pro C:64 - Pro C:65   [ RasMol ]  
    Pro D:64 - Pro D:65   [ RasMol ]  
    Pro E:64 - Pro E:65   [ RasMol ]  
    Pro F:64 - Pro F:65   [ RasMol ]  
 

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  1woh
    Family and Domain Information: ProDom | SYSTERS
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  Q9RZ04_DEIRA | Q9RZ04
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  3.5.3.11
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9RZ04_DEIRA | Q9RZ04: 1wog 1woi

(-) Related Entries Specified in the PDB File

1wog THE SAME PROTEIN WITH HEXANE-1,6-DIAMINE
1woi THE SAME PROTEIN WITH MANGANESE (II) ION