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(-) Description

Title :  PP5 STRUCTURE
 
Authors :  D. Barford
Date :  27 Oct 04  (Deposition) - 22 Feb 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym. Unit :  1,2,3,4
Biol. Unit 1:  1  (1x)
Biol. Unit 2:  2  (1x)
Biol. Unit 3:  3  (1x)
Biol. Unit 4:  4  (1x)
Keywords :  Hydrolase, Phosphatase, Protein-Protein Interactions, Tpr, Super-Helix, X-Ray Structure (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Yang, S. M. Roe, M. J. Cliff, M. A. Williams, J. E. Ladbury, P. T. Cohen, D. Barford
Molecular Basis For Tpr Domain-Mediated Regulation Of Protein Phosphatase 5
Embo J. V. 24 1 2005
PubMed-ID: 15577939  |  Reference-DOI: 10.1038/SJ.EMBOJ.7600496

(-) Compounds

Molecule 1 - SERINE/THREONINE PROTEIN PHOSPHATASE 5
    Chains1, 2, 3, 4
    EC Number3.1.3.16
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPGEX6P
    Expression System StrainBL834
    Expression System Taxid562
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPP5, PROTEIN PHOSPHATASE T, PP-T, PPT, PROTEIN PHOSPHATASE 5

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit 1234
Biological Unit 1 (1x)1   
Biological Unit 2 (1x) 2  
Biological Unit 3 (1x)  3 
Biological Unit 4 (1x)   4

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric Unit (1, 8)
No.NameCountTypeFull Name
1MN8Ligand/IonMANGANESE (II) ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1MN-1Ligand/IonMANGANESE (II) ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1MN-1Ligand/IonMANGANESE (II) ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1MN-1Ligand/IonMANGANESE (II) ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1MN-1Ligand/IonMANGANESE (II) ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP 1:271 , ASN 1:303 , HIS 1:352 , HIS 1:427 , MN 1:602BINDING SITE FOR RESIDUE MN 1 601
2AC2SOFTWAREASP 1:242 , HIS 1:244 , ASP 1:271 , TYR 1:451 , MN 1:601BINDING SITE FOR RESIDUE MN 1 602
3AC3SOFTWAREASP 2:242 , ASP 2:271 , ASN 2:303 , HIS 2:352 , HIS 2:427 , MN 2:602BINDING SITE FOR RESIDUE MN 2 601
4AC4SOFTWAREASP 2:242 , HIS 2:244 , ASP 2:271 , MN 2:601BINDING SITE FOR RESIDUE MN 2 602
5AC5SOFTWAREASP 3:242 , ASP 3:271 , ASN 3:303 , HIS 3:352 , HIS 3:427 , MN 3:602BINDING SITE FOR RESIDUE MN 3 601
6AC6SOFTWAREASP 3:242 , HIS 3:244 , ASP 3:271 , TYR 3:451 , MN 3:601BINDING SITE FOR RESIDUE MN 3 602
7AC7SOFTWAREASP 4:242 , ASP 4:271 , ASN 4:303 , HIS 4:352 , HIS 4:427 , MN 4:602BINDING SITE FOR RESIDUE MN 4 601
8AC8SOFTWAREGLU 4:76 , ASP 4:242 , HIS 4:244 , ASP 4:271 , ARG 4:275 , MN 4:601BINDING SITE FOR RESIDUE MN 4 602

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WAO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1WAO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WAO)

(-) PROSITE Motifs  (3, 20)

Asymmetric Unit (3, 20)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TPRPS50005 TPR repeat profile.PPP5_HUMAN28-61
 
 
 
62-95
 
 
 
96-129
 
 
 
  121:28-61
2:28-61
3:28-61
4:28-61
1:62-95
2:62-95
3:62-95
4:62-95
1:96-129
2:96-129
3:96-129
4:96-129
2TPR_REGIONPS50293 TPR repeat region circular profile.PPP5_HUMAN28-129
 
 
 
  41:28-129
2:28-129
3:28-129
4:28-129
3SER_THR_PHOSPHATASEPS00125 Serine/threonine specific protein phosphatases signature.PPP5_HUMAN300-305
 
 
 
  41:300-305
2:300-305
3:300-305
4:300-305
Biological Unit 1 (3, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TPRPS50005 TPR repeat profile.PPP5_HUMAN28-61
 
 
 
62-95
 
 
 
96-129
 
 
 
  31:28-61
-
-
-
1:62-95
-
-
-
1:96-129
-
-
-
2TPR_REGIONPS50293 TPR repeat region circular profile.PPP5_HUMAN28-129
 
 
 
  11:28-129
-
-
-
3SER_THR_PHOSPHATASEPS00125 Serine/threonine specific protein phosphatases signature.PPP5_HUMAN300-305
 
 
 
  11:300-305
-
-
-
Biological Unit 2 (3, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TPRPS50005 TPR repeat profile.PPP5_HUMAN28-61
 
 
 
62-95
 
 
 
96-129
 
 
 
  3-
2:28-61
-
-
-
2:62-95
-
-
-
2:96-129
-
-
2TPR_REGIONPS50293 TPR repeat region circular profile.PPP5_HUMAN28-129
 
 
 
  1-
2:28-129
-
-
3SER_THR_PHOSPHATASEPS00125 Serine/threonine specific protein phosphatases signature.PPP5_HUMAN300-305
 
 
 
  1-
2:300-305
-
-
Biological Unit 3 (3, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TPRPS50005 TPR repeat profile.PPP5_HUMAN28-61
 
 
 
62-95
 
 
 
96-129
 
 
 
  3-
-
3:28-61
-
-
-
3:62-95
-
-
-
3:96-129
-
2TPR_REGIONPS50293 TPR repeat region circular profile.PPP5_HUMAN28-129
 
 
 
  1-
-
3:28-129
-
3SER_THR_PHOSPHATASEPS00125 Serine/threonine specific protein phosphatases signature.PPP5_HUMAN300-305
 
 
 
  1-
-
3:300-305
-
Biological Unit 4 (3, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TPRPS50005 TPR repeat profile.PPP5_HUMAN28-61
 
 
 
62-95
 
 
 
96-129
 
 
 
  3-
-
-
4:28-61
-
-
-
4:62-95
-
-
-
4:96-129
2TPR_REGIONPS50293 TPR repeat region circular profile.PPP5_HUMAN28-129
 
 
 
  1-
-
-
4:28-129
3SER_THR_PHOSPHATASEPS00125 Serine/threonine specific protein phosphatases signature.PPP5_HUMAN300-305
 
 
 
  1-
-
-
4:300-305

(-) Exons   (13, 52)

Asymmetric Unit (13, 52)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000000124431aENSE00001134741chr19:46850251-46850474224PPP5_HUMAN1-414141:23-41
2:23-41
3:23-41
4:23-41
19
19
19
19
1.2bENST000000124432bENSE00001656217chr19:46857005-46857246242PPP5_HUMAN41-1218141:41-121
2:41-121
3:41-121
4:41-121
81
81
81
81
1.3bENST000000124433bENSE00001774243chr19:46878861-46879008148PPP5_HUMAN122-1715041:122-171 (gaps)
2:122-171 (gaps)
3:122-171 (gaps)
4:122-171 (gaps)
50
50
50
50
1.4aENST000000124434aENSE00001752760chr19:46879710-46879831122PPP5_HUMAN171-2114141:171-211
2:171-211
3:171-211
4:171-211
41
41
41
41
1.5fENST000000124435fENSE00001235477chr19:46886668-4688673366PPP5_HUMAN212-2332241:212-233
2:212-233
3:212-233
4:212-233
22
22
22
22
1.5hENST000000124435hENSE00000714122chr19:46887037-4688713599PPP5_HUMAN234-2663341:234-266
2:234-266
3:234-266
4:234-266
33
33
33
33
1.6bENST000000124436bENSE00000714127chr19:46888061-46888166106PPP5_HUMAN267-3023641:267-302
2:267-302
3:267-302
4:267-302
36
36
36
36
1.7cENST000000124437cENSE00000714132chr19:46890350-46890492143PPP5_HUMAN302-3494841:302-349
2:302-349
3:302-349
4:302-349
48
48
48
48
1.8aENST000000124438aENSE00000714135chr19:46890623-4689071088PPP5_HUMAN350-3793041:350-379
2:350-379
3:350-379
4:350-379
30
30
30
30
1.8eENST000000124438eENSE00000714138chr19:46891665-4689170541PPP5_HUMAN379-3921441:379-392
2:379-392
3:379-392
4:379-392
14
14
14
14
1.8gENST000000124438gENSE00000714141chr19:46891810-46891988179PPP5_HUMAN393-4526041:393-452
2:393-452
3:393-452
4:393-452
60
60
60
60
1.9aENST000000124439aENSE00000714144chr19:46893308-4689338982PPP5_HUMAN452-4792841:452-479
2:452-479
3:452-479
4:452-479
28
28
28
28
1.9hENST000000124439hENSE00001510079chr19:46893541-46894109569PPP5_HUMAN480-4992041:480-499
2:480-497
3:480-499
4:480-494
20
18
20
15

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 1 from PDB  Type:PROTEIN  Length:471
 aligned with PPP5_HUMAN | P53041 from UniProtKB/Swiss-Prot  Length:499

    Alignment length:477
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       
           PPP5_HUMAN    23 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQLGMM 499
               SCOP domains d1wao11 1:23-175 Protein phosphatase 5                                                                                                                   d1wao12 1:176-499 Serine/threonine protein phosphatase 5, PP5                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------1      wao102 1:151-499  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh.............hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..------.......................hhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...eeee......eeeee.....hhhhhhhhhhhhh.......eeee........hhhhhhhhhhhhhhhh...eeee.....hhhhhh..hhhhhhhhhh..hhhhhhhhhhh....eeee...eee...........hhhhhhh..........hhhhhhhhhee......ee......eeehhhhhhhhhhhh...eeee......eeeeeehhh.eeee............eeeeeeee..eeeeeeeee..............hhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----TPR_REGION  PDB: 1:28-129 UniProt: 28-129                                                             --------------------------------------------------------------------------------------------------------------------------------------------------------------------------SER_TH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -----TPR  PDB: 1:28-61 UniProt: 28-61  TPR  PDB: 1:62-95 UniProt: 62-95  TPR  PDB: 1:96-129 UniProt: 96-129---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1a          --------------------------------------------------------------------------------Exon 1.3b  PDB: 1:122-171 (gaps) UniProt: 122-171 ----------------------------------------Exon 1.5f             Exon 1.5h  PDB: 1:234-266        Exon 1.6b  PDB: 1:267-302           -----------------------------------------------Exon 1.8a  PDB: 1:350-379     -------------Exon 1.8g  PDB: 1:393-452 UniProt: 393-452                  ---------------------------Exon 1.9h            Transcript 1 (1)
           Transcript 1 (2) ------------------Exon 1.2b  PDB: 1:41-121 UniProt: 41-121                                         -------------------------------------------------Exon 1.4a  PDB: 1:171-211                ------------------------------------------------------------------------------------------Exon 1.7c  PDB: 1:302-349 UniProt: 302-349      -----------------------------Exon 1.8e     -----------------------------------------------------------Exon 1.9a  PDB: 1:452-479   -------------------- Transcript 1 (2)
                 1wao 1  23 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERA------KRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQLGMM 499
                                    32        42        52        62        72        82        92       102       112       122       132       142        |-     | 162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       
                                                                                                                                                          151    158                                                                                                                                                                                                                                                                                                                                                     

Chain 2 from PDB  Type:PROTEIN  Length:469
 aligned with PPP5_HUMAN | P53041 from UniProtKB/Swiss-Prot  Length:499

    Alignment length:475
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492     
           PPP5_HUMAN    23 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQLG 497
               SCOP domains d1wao21 2:23-175 Protein phosphatase 5                                                                                                                   d1wao22 2:176-497 Serine/threonine protein phosphatase 5, PP5                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------1      wao202 2:151-497  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..------.............................hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...eeee......eeeee.....hhhhhhhhhhhh........eee.........hhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh..hhhhhhhhhhh....eeee...eee...........hhhhhhh..........hhhhhhhhhee......ee......eeehhhhhhhhhhhh...eeee........eeeehhh.eeee.............eeeeeee..eeeeeeeee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----TPR_REGION  PDB: 2:28-129 UniProt: 28-129                                                             --------------------------------------------------------------------------------------------------------------------------------------------------------------------------SER_TH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (1)
                PROSITE (2) -----TPR  PDB: 2:28-61 UniProt: 28-61  TPR  PDB: 2:62-95 UniProt: 62-95  TPR  PDB: 2:96-129 UniProt: 96-129-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1a          --------------------------------------------------------------------------------Exon 1.3b  PDB: 2:122-171 (gaps) UniProt: 122-171 ----------------------------------------Exon 1.5f             Exon 1.5h  PDB: 2:234-266        Exon 1.6b  PDB: 2:267-302           -----------------------------------------------Exon 1.8a  PDB: 2:350-379     -------------Exon 1.8g  PDB: 2:393-452 UniProt: 393-452                  ---------------------------Exon 1.9h          Transcript 1 (1)
           Transcript 1 (2) ------------------Exon 1.2b  PDB: 2:41-121 UniProt: 41-121                                         -------------------------------------------------Exon 1.4a  PDB: 2:171-211                ------------------------------------------------------------------------------------------Exon 1.7c  PDB: 2:302-349 UniProt: 302-349      -----------------------------Exon 1.8e     -----------------------------------------------------------Exon 1.9a  PDB: 2:452-479   ------------------ Transcript 1 (2)
                 1wao 2  23 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERA------KRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQLG 497
                                    32        42        52        62        72        82        92       102       112       122       132       142        |-     | 162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492     
                                                                                                                                                          151    158                                                                                                                                                                                                                                                                                                                                                   

Chain 3 from PDB  Type:PROTEIN  Length:471
 aligned with PPP5_HUMAN | P53041 from UniProtKB/Swiss-Prot  Length:499

    Alignment length:477
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       
           PPP5_HUMAN    23 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQLGMM 499
               SCOP domains d1wao31 3:23-175 Protein phosphatase 5                                                                                                                   d1wao32 3:176-499 Serine/threonine protein phosphatase 5, PP5                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------1      wao302 3:151-499  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhh..hhhhhhhh.hhhhhhh............hhhhhhhhhh....hhhhhhhhh.........hhhhhhhhhhhhhhh...hhhhhhhhh...........hhhhhhhhhhhhhhhhh..------.......................hhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...eeee......eeeee.....hhhhhhhhhhhh........eee.........hhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh..hhhhhhhhhhh....eeee...eee...........hhhhhhh..........hhhhhhhhhee......ee......eeehhhhhhhhhhhh...eeee........eeeehhh.eeee.............eeeeeee......eeeee....................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----TPR_REGION  PDB: 3:28-129 UniProt: 28-129                                                             --------------------------------------------------------------------------------------------------------------------------------------------------------------------------SER_TH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -----TPR  PDB: 3:28-61 UniProt: 28-61  TPR  PDB: 3:62-95 UniProt: 62-95  TPR  PDB: 3:96-129 UniProt: 96-129---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1a          --------------------------------------------------------------------------------Exon 1.3b  PDB: 3:122-171 (gaps) UniProt: 122-171 ----------------------------------------Exon 1.5f             Exon 1.5h  PDB: 3:234-266        Exon 1.6b  PDB: 3:267-302           -----------------------------------------------Exon 1.8a  PDB: 3:350-379     -------------Exon 1.8g  PDB: 3:393-452 UniProt: 393-452                  ---------------------------Exon 1.9h            Transcript 1 (1)
           Transcript 1 (2) ------------------Exon 1.2b  PDB: 3:41-121 UniProt: 41-121                                         -------------------------------------------------Exon 1.4a  PDB: 3:171-211                ------------------------------------------------------------------------------------------Exon 1.7c  PDB: 3:302-349 UniProt: 302-349      -----------------------------Exon 1.8e     -----------------------------------------------------------Exon 1.9a  PDB: 3:452-479   -------------------- Transcript 1 (2)
                 1wao 3  23 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERA------KRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQLGMM 499
                                    32        42        52        62        72        82        92       102       112       122       132       142        |-     | 162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       
                                                                                                                                                          151    158                                                                                                                                                                                                                                                                                                                                                     

Chain 4 from PDB  Type:PROTEIN  Length:466
 aligned with PPP5_HUMAN | P53041 from UniProtKB/Swiss-Prot  Length:499

    Alignment length:472
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492  
           PPP5_HUMAN    23 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLL 494
               SCOP domains d1wao41 4:23-175 Protein phosphatase 5                                                                                                                   d1wao42 4:176-494 Serine/threonine protein phosphatase 5, PP5                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------1      wao402 4:151-494  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                                              CATH domains
           Pfam domains (1) -------------------------------------------------------------------------TPR_1-1wao409 4:96-129            -----PPP5-1wao405 4:13      5-229                                                                   -----Metallophos-1wao401 4:235-431                                                                                                                                                                        --------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------------TPR_1-1wao410 4:96-129            -----PPP5-1wao406 4:13      5-229                                                                   -----Metallophos-1wao402 4:235-431                                                                                                                                                                        --------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------------------------------------------------TPR_1-1wao411 4:96-129            -----PPP5-1wao407 4:13      5-229                                                                   -----Metallophos-1wao403 4:235-431                                                                                                                                                                        --------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------------------------------------------------TPR_1-1wao412 4:96-129            -----PPP5-1wao408 4:13      5-229                                                                   -----Metallophos-1wao404 4:235-431                                                                                                                                                                        --------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) -------------------------------------------------------------------------TPR_1-1wao413 4:96-129            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) -------------------------------------------------------------------------TPR_1-1wao414 4:96-129            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (6)
           Pfam domains (7) -------------------------------------------------------------------------TPR_1-1wao415 4:96-129            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (7)
           Pfam domains (8) -------------------------------------------------------------------------TPR_1-1wao416 4:96-129            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (8)
         Sec.struct. author ...hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..------.............................hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...eeee......eeeee.....hhhhhhhhhhhhh.......eee.........hhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh..hhhhhhhhhhh....eeee...eee...........hhhhhhh..........hhhhhhhhhee......ee......eeehhhhhhhhhhhh...eeee........eeeehhh.eeee.............eeeeeee..eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----TPR_REGION  PDB: 4:28-129 UniProt: 28-129                                                             --------------------------------------------------------------------------------------------------------------------------------------------------------------------------SER_TH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -----TPR  PDB: 4:28-61 UniProt: 28-61  TPR  PDB: 4:62-95 UniProt: 62-95  TPR  PDB: 4:96-129 UniProt: 96-129----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1a          --------------------------------------------------------------------------------Exon 1.3b  PDB: 4:122-171 (gaps) UniProt: 122-171 ----------------------------------------Exon 1.5f             Exon 1.5h  PDB: 4:234-266        Exon 1.6b  PDB: 4:267-302           -----------------------------------------------Exon 1.8a  PDB: 4:350-379     -------------Exon 1.8g  PDB: 4:393-452 UniProt: 393-452                  ---------------------------Exon 1.9h       Transcript 1 (1)
           Transcript 1 (2) ------------------Exon 1.2b  PDB: 4:41-121 UniProt: 41-121                                         -------------------------------------------------Exon 1.4a  PDB: 4:171-211                ------------------------------------------------------------------------------------------Exon 1.7c  PDB: 4:302-349 UniProt: 302-349      -----------------------------Exon 1.8e     -----------------------------------------------------------Exon 1.9a  PDB: 4:452-479   --------------- Transcript 1 (2)
                 1wao 4  23 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERA------KRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLL 494
                                    32        42        52        62        72        82        92       102       112       122       132       142        |-     | 162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492  
                                                                                                                                                          151    158                                                                                                                                                                                                                                                                                                                                                

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (3, 16)

Asymmetric Unit
(-)
Clan: TPR (230)
(-)
Family: PPP5 (1)
2aPPP5-1wao4054:135-229
2bPPP5-1wao4064:135-229
2cPPP5-1wao4074:135-229
2dPPP5-1wao4084:135-229
(-)
Family: TPR_1 (18)
3aTPR_1-1wao4094:96-129
3bTPR_1-1wao4104:96-129
3cTPR_1-1wao4114:96-129
3dTPR_1-1wao4124:96-129
3eTPR_1-1wao4134:96-129
3fTPR_1-1wao4144:96-129
3gTPR_1-1wao4154:96-129
3hTPR_1-1wao4164:96-129

(-) Gene Ontology  (44, 44)

Asymmetric Unit(hide GO term definitions)
Chain 1,2,3,4   (PPP5_HUMAN | P53041)
molecular function
    GO:0043531    ADP binding    Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0001965    G-protein alpha-subunit binding    Interacting selectively and non-covalently with a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide.
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0031072    heat shock protein binding    Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0008289    lipid binding    Interacting selectively and non-covalently with a lipid.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0008017    microtubule binding    Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
    GO:0004721    phosphoprotein phosphatase activity    Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004722    protein serine/threonine phosphatase activity    Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
    GO:0004871    signal transducer activity    Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
biological process
    GO:0006281    DNA repair    The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
    GO:0000165    MAPK cascade    An intracellular protein kinase cascade containing at least a MAPK, a MAPKK and a MAP3K. The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell.
    GO:0006974    cellular response to DNA damage stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
    GO:0071276    cellular response to cadmium ion    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
    GO:0070301    cellular response to hydrogen peroxide    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
    GO:0016576    histone dephosphorylation    The modification of histones by removal of phosphate groups.
    GO:0060548    negative regulation of cell death    Any process that decreases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.
    GO:1901215    negative regulation of neuron death    Any process that stops, prevents or reduces the frequency, rate or extent of neuron death.
    GO:0001933    negative regulation of protein phosphorylation    Any process that stops, prevents or reduces the rate of addition of phosphate groups to amino acids within a protein.
    GO:0043123    positive regulation of I-kappaB kinase/NF-kappaB signaling    Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling.
    GO:2000324    positive regulation of glucocorticoid receptor signaling pathway    Any process that activates or increases the frequency, rate or extent of glucocorticoid receptor signaling pathway.
    GO:0006470    protein dephosphorylation    The process of removing one or more phosphoric residues from a protein.
    GO:0051291    protein heterooligomerization    The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers that are not all identical. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
    GO:0051259    protein oligomerization    The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
    GO:0010288    response to lead ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.
    GO:0043278    response to morphine    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
cellular component
    GO:0071944    cell periphery    The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0043231    intracellular membrane-bounded organelle    Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0043204    perikaryon    The portion of the cell soma (neuronal cell body) that excludes the nucleus.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043234    protein complex    A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
    GO:1990635    proximal dendrite    That part of the dendrite closest to the cell body of the neuron.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PPP5_HUMAN | P530411a17 1s95 2bug 3h60 3h61 3h62 3h63 3h64 3h66 3h67 3h68 3h69 4zvz 4zx2 5hpe

(-) Related Entries Specified in the PDB File

1a17 TETRATRICOPEPTIDE REPEATS OF PROTEIN PHOSPHATASE 5
1s95 STRUCTURE OF SERINE/THREONINE PROTEIN PHOSPHATASE 5