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(-) Description

Title :  THE THREE-DIMENSIONAL STRUCTURE OF BETA-FRUCTOSIDASE (INVERTASE) FROM THERMOTOGA MARITIMA
 
Authors :  F. Alberto, C. Bignon, G. Sulzenbacher, B. Henrissat, M. Czjzek
Date :  02 Mar 04  (Deposition) - 22 Mar 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Keywords :  Invertase, Glycosyl Hydrolase Family 32, Sucrose Degradation, Beta-Propeller, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Alberto, C. Bignon, G. Sulzenbacher, B. Henrissat, M. Czjzek
The Three-Dimensional Structure Of Invertase ({Beta}-Fructosidase) From Thermotoga Maritima Reveals A Bimodular Arrangement And An Evolutionary Relationship Between Retaining And Inverting Glycosidases
J. Biol. Chem. V. 279 18903 2004
PubMed-ID: 14973124  |  Reference-DOI: 10.1074/JBC.M313911200

(-) Compounds

Molecule 1 - BETA-FRUCTOSIDASE
    Chains: A, B, C, D, E, F
    EC Number: 3.2.1.26
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PDEST17
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 243274
    Other Details: GERMAN COLLECTION OF MICROORGANISMS (DSM 3109)
    Strain: MSB8

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A     
Biological Unit 2 (1x):  B    
Biological Unit 3 (1x):   C   
Biological Unit 4 (1x):    D  
Biological Unit 5 (1x):     E 
Biological Unit 6 (1x):      F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 22)

Asymmetric Unit (4, 22)
No.NameCountTypeFull Name
1CIT1Ligand/IonCITRIC ACID
2GOL6Ligand/IonGLYCEROL
3NA1Ligand/IonSODIUM ION
4SO414Ligand/IonSULFATE ION
Biological Unit 1 (3, 5)
No.NameCountTypeFull Name
1CIT1Ligand/IonCITRIC ACID
2GOL1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4SO43Ligand/IonSULFATE ION
Biological Unit 2 (2, 5)
No.NameCountTypeFull Name
1CIT-1Ligand/IonCITRIC ACID
2GOL1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4SO44Ligand/IonSULFATE ION
Biological Unit 3 (2, 4)
No.NameCountTypeFull Name
1CIT-1Ligand/IonCITRIC ACID
2GOL1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4SO43Ligand/IonSULFATE ION
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1CIT-1Ligand/IonCITRIC ACID
2GOL1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4SO4-1Ligand/IonSULFATE ION
Biological Unit 5 (2, 2)
No.NameCountTypeFull Name
1CIT-1Ligand/IonCITRIC ACID
2GOL1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4SO41Ligand/IonSULFATE ION
Biological Unit 6 (2, 4)
No.NameCountTypeFull Name
1CIT-1Ligand/IonCITRIC ACID
2GOL1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4SO43Ligand/IonSULFATE ION

(-) Sites  (22, 22)

Asymmetric Unit (22, 22)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETRP A:41 , GLY A:42 , ASN A:43 , ILE A:44 , HIS A:71 , ASP A:94BINDING SITE FOR RESIDUE SO4 A1433
02AC2SOFTWARETYR A:28 , THR A:248 , ASP A:249 , ARG A:250 , ASP D:249BINDING SITE FOR RESIDUE SO4 A1434
03AC3SOFTWARELEU A:265BINDING SITE FOR RESIDUE SO4 A1435
04AC4SOFTWAREMET A:109 , CIT A:1436 , HOH A:2012BINDING SITE FOR RESIDUE NA A1438
05AC5SOFTWAREARG B:360 , HOH B:2312 , TYR C:266 , PRO C:267 , THR C:268 , LYS C:269 , ARG C:270BINDING SITE FOR RESIDUE SO4 B1433
06AC6SOFTWAREARG B:93 , LYS B:99 , LYS B:102BINDING SITE FOR RESIDUE SO4 B1434
07AC7SOFTWAREGLU B:101 , GLU B:103 , HIS B:134 , ALA B:135 , ARG B:137 , GLU B:188BINDING SITE FOR RESIDUE SO4 B1435
08AC8SOFTWARETYR B:28 , THR B:248 , ASP B:249 , ARG B:250BINDING SITE FOR RESIDUE SO4 B1437
09AC9SOFTWARETYR C:28 , THR C:248 , ASP C:249 , ARG C:250BINDING SITE FOR RESIDUE SO4 C1433
10BC1SOFTWAREARG C:37 , LYS C:38 , HOH C:2029 , HOH C:2297BINDING SITE FOR RESIDUE SO4 C1434
11BC2SOFTWAREGLU C:101 , GLU C:103 , HIS C:134 , ALA C:135 , ARG C:137BINDING SITE FOR RESIDUE SO4 C1435
12BC3SOFTWARETYR E:28 , THR E:248 , ASP E:249 , ARG E:250BINDING SITE FOR RESIDUE SO4 E1433
13BC4SOFTWARELEU F:1 , ARG F:270 , GLU F:271BINDING SITE FOR RESIDUE SO4 F1433
14BC5SOFTWARETYR F:266 , PRO F:267 , LYS F:269 , ARG F:270 , HOH F:2277BINDING SITE FOR RESIDUE SO4 F1434
15BC6SOFTWARETYR F:28 , THR F:248 , ASP F:249 , ARG F:250BINDING SITE FOR RESIDUE SO4 F1435
16BC7SOFTWAREVAL A:117 , LYS A:118 , TYR A:119 , ASP A:120 , NA A:1438 , HOH A:2289BINDING SITE FOR RESIDUE CIT A1436
17BC8SOFTWAREASN A:16 , ASP A:17 , GLN A:33 , TRP A:41 , PHE A:74 , SER A:75 , ARG A:137 , ASP A:138 , HOH A:2014BINDING SITE FOR RESIDUE GOL A1437
18BC9SOFTWAREASN B:16 , ASP B:17 , GLN B:33 , TRP B:41 , PHE B:74 , SER B:75 , ASP B:138BINDING SITE FOR RESIDUE GOL B1436
19CC1SOFTWAREASN C:16 , GLN C:33 , TRP C:41 , PHE C:74 , SER C:75 , ARG C:137 , HOH C:2298BINDING SITE FOR RESIDUE GOL C1436
20CC2SOFTWAREASN D:16 , ASP D:17 , GLN D:33 , TRP D:41 , PHE D:74 , SER D:75 , ASP D:138BINDING SITE FOR RESIDUE GOL D1433
21CC3SOFTWAREASN E:16 , ASP E:17 , GLN E:33 , TRP E:41 , PHE E:74 , SER E:75 , ARG E:137 , ASP E:138BINDING SITE FOR RESIDUE GOL E1434
22CC4SOFTWAREASN F:16 , ASP F:17 , GLN F:33 , TRP F:41 , PHE F:74 , SER F:75 , ASP F:138BINDING SITE FOR RESIDUE GOL F1436

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1UYP)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Asn A:122 -Pro A:123
2Asn B:122 -Pro B:123
3Asn C:122 -Pro C:123
4Asn D:122 -Pro D:123
5Asn E:122 -Pro E:123
6Asn F:122 -Pro F:123

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1UYP)

(-) PROSITE Motifs  (1, 6)

Asymmetric Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.BFRA_THEMA7-20
 
 
 
 
 		  6A:7-20
B:7-20
C:7-20
D:7-20
E:7-20
F:7-20
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.BFRA_THEMA7-20
 
 
 
 
 		  1A:7-20
-
-
-
-
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.BFRA_THEMA7-20
 
 
 
 
 		  1-
B:7-20
-
-
-
-
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.BFRA_THEMA7-20
 
 
 
 
 		  1-
-
C:7-20
-
-
-
Biological Unit 4 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.BFRA_THEMA7-20
 
 
 
 
 		  1-
-
-
D:7-20
-
-
Biological Unit 5 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.BFRA_THEMA7-20
 
 
 
 
 		  1-
-
-
-
E:7-20
-
Biological Unit 6 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.BFRA_THEMA7-20
 
 
 
 
 		  1-
-
-
-
-
F:7-20

(-) Exons   (0, 0)

(no "Exon" information available for 1UYP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:432
 aligned with BFRA_THEMA | O33833 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  
           BFRA_THEMA     1 MFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVAMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGVIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
               SCOP domains d1uypa2 A:1-294 Beta-fructosidase (invertase), N-terminal domain                                                                                                                                                                                                                                      d1uypa1 A:295-432 Beta-fructosidase (invertase), C-terminal domain                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eeeeeeeeeeee..eeeeeeeee.........eeeeeee......eeeeeee......eeeeeeeeeee..eeeeeeeeee........eeeeeeeee......ee..............eeeeeeeeeeee..eeeeeeeeee...eeeeeeeee.....eeeeeeeeee.....eeeeeeeee..eeeeeeee....eeeeeeeeee..eeeeeeeee.......eeeee......eeeeee.....hhhhhhhhhh.ee......eeeeee..eeeeee.hhhhh.eeeeeeee...eeee.......eeeeeeeeeeeeeeee........................................................................eeeeeeeeeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------GLYCOSYL_HYDRO---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1uyp A   1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  


Chain B from PDB  Type:PROTEIN  Length:432
 aligned with BFRA_THEMA | O33833 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  
           BFRA_THEMA     1 MFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVAMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGVIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
               SCOP domains d1uypb2 B:1-294 Beta-fructosidase (invertase), N-terminal domain                                                                                                                                                                                                                                      d1uypb1 B:295-432 Beta-fructosidase (invertase), C-terminal domain                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eeeeeeeeeeee..eeeeeeeee.........eeeeeee......eeeeeee......eeeeeeeeeee..eeeeeeeeee........eeeeeeeee......ee..............eeeeeeeeeeee..eeeeeeeeee...eeeeeeeee......eeeeeeeee......eeeeeeee..eeeeeeee....eeeeeeeeee..eeeeeeeee.......eeeee......eeeeee.....hhhhhhhhhh.ee......eeeeee..eeeeee.hhhhh.eeeeeeee...eeee.......eeeeeeeeeeeeeeee........................................................................eeeeeeeeeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------GLYCOSYL_HYDRO---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1uyp B   1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  


Chain C from PDB  Type:PROTEIN  Length:432
 aligned with BFRA_THEMA | O33833 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  
           BFRA_THEMA     1 MFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVAMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGVIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
               SCOP domains d1uypc2 C:1-294 Beta-fructosidase (invertase), N-terminal domain                                                                                                                                                                                                                                      d1uypc1 C:295-432 Beta-fructosidase (invertase), C-terminal domain                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eeeeeeeeeeee..eeeeeeeee.........eeeeeee......eeeeeee......eeeeeeeeeee..eeeeeeeeee........eeeeeeeee......ee..............eeeeeeeeeeee..eeeeeeeeee...eeeeeeeee......eeeeeeeee......eeeeeeee..eeeeeeee....eeeeeeeeee..eeeeeeeee.......eeeee......eeeeee.....hhhhh.hhhh.ee......eeeeee..eeeeee.hhhhh.eeeeeeee...eeee.......eeeeeeeeeeeeeeee........................................................................eeeeeeeeeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------GLYCOSYL_HYDRO---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1uyp C   1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  


Chain D from PDB  Type:PROTEIN  Length:432
 aligned with BFRA_THEMA | O33833 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  
           BFRA_THEMA     1 MFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVAMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGVIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
               SCOP domains d1uypd2 D:1-294 Beta-fructosidase (invertase), N-terminal domain                                                                                                                                                                                                                                      d1uypd1 D:295-432 Beta-fructosidase (invertase), C-terminal domain                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eeeeeeeeeeee..eeeeeeeee.........eeeeeee......eeeeeee......eeeeeeeeeee..eeeeeeeeee........eeeeeeeee......ee..............eeeeeeeeeeee..eeeeeeeeee...eeeeeeeee......eeeeeeeee......eeeeeeee..eeeeeeee....eeeeeeeeee..eeeeeeeee.......eeeee......eeeeee.....hhhhhhhhhh.ee......eeeeee..eeeeee.hhhhh.eeeeeeee...eeee.......eeeeeee...eeeeee....eeeeeee..eeeeeeee.......eeeee......eeeeeeee..eeeeee...eeeeee........eeeee....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------GLYCOSYL_HYDRO---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1uyp D   1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  


Chain E from PDB  Type:PROTEIN  Length:432
 aligned with BFRA_THEMA | O33833 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  
           BFRA_THEMA     1 MFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVAMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGVIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
               SCOP domains d1uype2 E:1-294 Beta-fructosidase (invertase), N-terminal domain                                                                                                                                                                                                                                      d1uype1 E:295-432 Beta-fructosidase (invertase), C-terminal domain                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............eeeeeeeeeeee..eeeeeeeee.........eeeeeee......eeeeeee......eeeeeeeeeee..eeeeeeeeee........eeeeeeeee......ee..............eeeeeeeeeeee..eeeeeeeeee...eeeeeeeee......eeeeeeeee......eeeeeeee..eeeeeeee....eeeeeeeeee..eeeeeeeee.......eeeee......eeeeee.....hhhhhhhhhh.ee......eeeeee..eeeeee.hhhhh.eeeeeeee...eeee.......eeeeeee...eeeeee....eeeeeee..eeeee..........eeeee......eeeeeeee..eeeeee...eeeeee........eeeee....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------GLYCOSYL_HYDRO---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1uyp E   1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  


Chain F from PDB  Type:PROTEIN  Length:432
 aligned with BFRA_THEMA | O33833 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  
           BFRA_THEMA     1 MFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVAMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGVIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
               SCOP domains d1uypf2 F:1-294 Beta-fructosidase (invertase), N-terminal domain                                                                                                                                                                                                                                      d1uypf1 F:295-432 Beta-fructosidase (invertase), C-terminal domain                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ------Glyco_hydro_32N-1uypF01 F:7-294                                                                                                                                                                                                                                                                 ----------------------Glyco_hydro_32C-1uypF07 F:317-397                                                ----------------------------------- Pfam domains (1)
           Pfam domains (2) ------Glyco_hydro_32N-1uypF02 F:7-294                                                                                                                                                                                                                                                                 ----------------------Glyco_hydro_32C-1uypF08 F:317-397                                                ----------------------------------- Pfam domains (2)
           Pfam domains (3) ------Glyco_hydro_32N-1uypF03 F:7-294                                                                                                                                                                                                                                                                 ----------------------Glyco_hydro_32C-1uypF09 F:317-397                                                ----------------------------------- Pfam domains (3)
           Pfam domains (4) ------Glyco_hydro_32N-1uypF04 F:7-294                                                                                                                                                                                                                                                                 ----------------------Glyco_hydro_32C-1uypF10 F:317-397                                                ----------------------------------- Pfam domains (4)
           Pfam domains (5) ------Glyco_hydro_32N-1uypF05 F:7-294                                                                                                                                                                                                                                                                 ----------------------Glyco_hydro_32C-1uypF11 F:317-397                                                ----------------------------------- Pfam domains (5)
           Pfam domains (6) ------Glyco_hydro_32N-1uypF06 F:7-294                                                                                                                                                                                                                                                                 ----------------------Glyco_hydro_32C-1uypF12 F:317-397                                                ----------------------------------- Pfam domains (6)
         Sec.struct. author ............eeeeeeeeeeee..eeeeeeeee.........eeeeeee......eeeeeee......eeeeeeeeeee..eeeeeeeeee........eeeeeeeee......ee..............eeeeeeeeeeee..eeeeeeeeee...eeeeeeeee......eeeeeeeee......eeeeeeee..eeeeeeee....eeeeeeeeee..eeeeeeeee.......eeeee......eeeeee.....hhhhh.hhhh.ee......eeeeee..eeeeee.hhhhh.eeeeeeee...eeee.......eeeeeee...eeeeee....eeeeeee..eeeeeeee.......eeeee......eeeeeeee..eeeeee...eeeeee........eeeee....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------GLYCOSYL_HYDRO---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1uyp F   1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDSIAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL 432
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1UYP)

(-) Pfam Domains  (2, 12)

Asymmetric Unit
(-)
Clan: B_Fructosidase (34)
(-)
Clan: no clan defined [family: Glyco_hydro_32C] (13)

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (BFRA_THEMA | O33833)
molecular function
    GO:0004564    beta-fructofuranosidase activity    Catalysis of the reaction: a fructofuranosylated fructofuranosyl acceptor + H2O = a non fructofuranosylated fructofuranosyl acceptor + a beta-D-fructofuranoside.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0004575    sucrose alpha-glucosidase activity    Catalysis of the reaction: sucrose + H2O = alpha-D-glucose + beta-D-fructose.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0005987    sucrose catabolic process    The chemical reactions and pathways resulting in the breakdown of sucrose, the disaccharide fructofuranosyl-glucopyranoside.

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  1uyp
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        BFRA_THEMA | O33833: 1w2t

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1UYP)