1UT2 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   AFAE-3 ADHESIN FROM ESCHERICHIA COLI

Authors :   K. L. Anderson, J. Billington, D. Pettigrew, E. Cota, P. Roversi, P. Simpson, H. A. Chen, P. Urvil, L. Dumerle, P. Barlow, E. Medof, R. A. G. Smith, B. Nowicki, C. Le Bouguenec, S. M. Lea, S. Matthews

Date :   02 Dec 03 (Deposition) - 31 Aug 04 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.30

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I
Biol. Unit 1: A,B,C  (1x)
Biol. Unit 2: D,E,I  (1x)
Biol. Unit 3: F,G,H  (1x)

Keywords :   Adhesin, Afae-3, Afimbrial Adhesin, Upec, Daec (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Pettigrew, K. L. Anderson, J. Billington, E. Cota, P. Simpson, P. Urvil, F. Rabuzin, P. Roversi, B. Nowicki, L. Du Merle, C. Le Bouguenec, S. Matthews, S. M. Lea
High Resolution Studies Of The Afa/Dr Adhesin Drae And Its Interaction With Chloramphenicol
J. Biol. Chem. V. 279 46851 2004
PubMed-ID: 15331605 | Reference-DOI: 10.1074/JBC.M409284200
(for further references see the PDB file header)

Molecule 1 - AFIMBRIAL ADHESIN AFA-III
	Chains	:	A, B, C, D, E, F, G, H, I
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PQE-30
	Expression System Strain	:	M15
	Expression System Taxid	:	562
	Mutation	:	YES
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562
	Other Details	:	N-TERMINUS 6-HIS-TAGGED
	Strain	:	A30
	Synonym	:	AFA-III, AFAE3

		1	2	3	4	5	6	7	8	9
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I
Biological Unit 1 (1x)	:	A	B	C
Biological Unit 2 (1x)	:				D	E				I
Biological Unit 3 (1x)	:						F	G	H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 3)

No.	Name	Count	Type	Full Name
1	SO4	3	Ligand/Ion	SULFATE ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLU D:17 , GLU D:18 , ARG D:32 , GLN H:119	BINDING SITE FOR RESIDUE SO4 D1139
2	AC2	SOFTWARE	GLY A:50 , CYS A:51 , ASN A:52 , SER A:107 , GLY H:50 , ASN H:52 , SER H:107	BINDING SITE FOR RESIDUE SO4 H1140
3	AC3	SOFTWARE	GLY F:118 , GLN F:119 , ARG I:54 , TYR I:136	BINDING SITE FOR RESIDUE SO4 I1139

Asymmetric Unit

No.	Residues
1	A:19	-	C:51
2	A:51	-	B:19
3	B:51	-	C:19
4	D:19	-	E:51
5	D:51	-	I:19
6	E:19	-	I:51
7	F:19	-	G:51
8	F:51	-	H:19
9	G:19	-	H:51

Asymmetric Unit

No.	Residues
1	Asp B:25	-	Leu B:26
2	Ala H:138	-	Lys H:139

Asymmetric Unit (2, 18)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_AFAE3_ECOLX_001 *	A	59	T	AFAE3_ECOLX	---	---	A/B/C/D/E/F/G/H/I	A	38	T
2	UniProt	VAR_AFAE3_ECOLX_002 *	N	73	D	AFAE3_ECOLX	---	---	A/B/C/D/E/F/G/H/I	N	52	D
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_AFAE3_ECOLX_001 *	A	59	T	AFAE3_ECOLX	---	---	A/B/C	A	38	T
2	UniProt	VAR_AFAE3_ECOLX_002 *	N	73	D	AFAE3_ECOLX	---	---	A/B/C	N	52	D
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (2, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_AFAE3_ECOLX_001 *	A	59	T	AFAE3_ECOLX	---	---	D/E/I	A	38	T
2	UniProt	VAR_AFAE3_ECOLX_002 *	N	73	D	AFAE3_ECOLX	---	---	D/E/I	N	52	D
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (2, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_AFAE3_ECOLX_001 *	A	59	T	AFAE3_ECOLX	---	---	F/G/H	A	38	T
2	UniProt	VAR_AFAE3_ECOLX_002 *	N	73	D	AFAE3_ECOLX	---	---	F/G/H	N	52	D
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 1UT2)

(no "Exon" information available for 1UT2)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:138
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 159
               SCOP domains d1ut2a_ A: DraA/Afimbrial adhesin Afa-III                                                                                                   SCOP domains
               CATH domains 1ut2A00 A:0-138 Afimbrial adhesin afa-iii.                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee...eeee....eeee.hhh....eeeeeeeeee............hhh...-.eeeee.....eeeeeeee.....................eeeeeeee.........eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 A   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQ-KFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 138
                                     9        19        29        39        49        59       |69        79        89        99       109       119       129         
                                                                                              67 |                                                                     
                                                                                                69

Chain B from PDB  Type:PROTEIN  Length:139
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 159
               SCOP domains d1ut2b_ B: DraA/Afimbrial adhesin Afa-III                                                                                                   SCOP domains
               CATH domains 1ut2B00 B:0-138 Afimbrial adhesin afa-iii.                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee...eeee....eeee.hhh....eeeeeeeeee............hhh.....eeeee.....eeeeeeee.....................eeeeeeee.........eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 B   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 138
                                     9        19        29        39        49        59        69        79        89        99       109       119       129

Chain C from PDB  Type:PROTEIN  Length:139
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 159
               SCOP domains d1ut2c_ C: DraA/Afimbrial adhesin Afa-III                                                                                                   SCOP domains
               CATH domains 1ut2C00 C:0-138 Afimbrial adhesin afa-iii.                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee...eee......eee.hhh....eeeeeeeeee............hhh.....eeeee.....eeeeeeee.....................eeeeeeee.........eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 C   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 138
                                     9        19        29        39        49        59        69        79        89        99       109       119       129

Chain D from PDB  Type:PROTEIN  Length:139
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 159
               SCOP domains d1ut2d_ D: DraA/Afimbrial adhesin Afa-III                                                                                                   SCOP domains
               CATH domains 1ut2D00 D:0-138 Afimbrial adhesin afa-iii.                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee............eee.hhh...................eeeeee.hhh............................eeee..eeeeeee....................eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 D   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 138
                                     9        19        29        39        49        59        69        79        89        99       109       119       129

Chain E from PDB  Type:PROTEIN  Length:139
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 159
               SCOP domains d1ut2e_ E: DraA/Afimbrial adhesin Afa-III                                                                                                   SCOP domains
               CATH domains 1ut2E00 E:0-138 Afimbrial adhesin afa-iii.                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeeee...........eeee.hhh...................eeeeee.hhh............................eeee..eeee.......................eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 E   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 138
                                     9        19        29        39        49        59        69        79        89        99       109       119       129

Chain F from PDB  Type:PROTEIN  Length:139
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 159
               SCOP domains d1ut2f_ F: DraA/Afimbrial adhesin Afa-III                                                                                                   SCOP domains
               CATH domains 1ut2F00 F:0-138 Afimbrial adhesin afa-iii.                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeeee............eee.hhh...................eeeeee.hhh............................eeee..eeee.......................eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 F   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 138
                                     9        19        29        39        49        59        69        79        89        99       109       119       129

Chain G from PDB  Type:PROTEIN  Length:139
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 159
               SCOP domains d1ut2g_ G: DraA/Afimbrial adhesin Afa-III                                                                                                   SCOP domains
               CATH domains 1ut2G00 G:0-138 Afimbrial adhesin afa-iii.                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee...........eeee.hhh...................eeeeee.hhh............................eeee..eeee.......................eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 G   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 138
                                     9        19        29        39        49        59        69        79        89        99       109       119       129

Chain H from PDB  Type:PROTEIN  Length:140
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:140
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWAK 160
               SCOP domains d1ut2h_ H: DraA/Afimbrial adhesin Afa-III                                                                                                    SCOP domains
               CATH domains 1ut2H00 H:0-139 Afimbrial adhesin afa-iii.                                                                                                   CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeeee...........eeee.......................eeeeee.hhh............................eeee..eeee.......................eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D--------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 H   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWAK 139
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139

Chain I from PDB  Type:PROTEIN  Length:139
 aligned with AFAE3_ECOLX | Q57254 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
          AFAE3_ECOLX    21 AGFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 159
               SCOP domains d1ut2i_ I: DraA/Afimbrial adhesin Afa-III                                                                                                   SCOP domains
               CATH domains 1ut2I00 I:0-138 Afimbrial adhesin afa-iii.                                                                                                  CATH domains
           Pfam domains (1) --Adhesin_Dr-1ut2I01 I:2-138                                                                                                                Pfam domains (1)
           Pfam domains (2) --Adhesin_Dr-1ut2I02 I:2-138                                                                                                                Pfam domains (2)
           Pfam domains (3) --Adhesin_Dr-1ut2I03 I:2-138                                                                                                                Pfam domains (3)
           Pfam domains (4) --Adhesin_Dr-1ut2I04 I:2-138                                                                                                                Pfam domains (4)
           Pfam domains (5) --Adhesin_Dr-1ut2I05 I:2-138                                                                                                                Pfam domains (5)
           Pfam domains (6) --Adhesin_Dr-1ut2I06 I:2-138                                                                                                                Pfam domains (6)
           Pfam domains (7) --Adhesin_Dr-1ut2I07 I:2-138                                                                                                                Pfam domains (7)
           Pfam domains (8) --Adhesin_Dr-1ut2I08 I:2-138                                                                                                                Pfam domains (8)
           Pfam domains (9) --Adhesin_Dr-1ut2I09 I:2-138                                                                                                                Pfam domains (9)
         Sec.struct. author ..eeeeeeeeeeeeeee...........eeee.hhh...................eeeeee....ee..eeeeee..................eeee..eeee.......................eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------T-------------D-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ut2 I   0 GSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 138
                                     9        19        29        39        49        59        69        79        89        99       109       119       129

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f (364)

Superfamily: Bacterial adhesins (93)

Family: Dr-family adhesin (11)

Protein domain: DraA/Afimbrial adhesin Afa-III (11)

Escherichia coli [TaxId: 562] (11)

1a	d1ut2a_	A:
1b	d1ut2b_	B:
1c	d1ut2c_	C:
1d	d1ut2d_	D:
1e	d1ut2e_	E:
1f	d1ut2f_	F:
1g	d1ut2g_	G:
1h	d1ut2h_	H:
1i	d1ut2i_	I:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Sandwich (5577)

Topology: Immunoglobulin-like (3897)

Homologous Superfamily: Afimbrial adhesin afa-iii. (12)

Escherichia coli. Organism_taxid: 562. Strain: a30. (2)

1a	1ut2B00	B:0-138
1b	1ut2C00	C:0-138
1c	1ut2D00	D:0-138
1d	1ut2E00	E:0-138
1e	1ut2F00	F:0-138
1f	1ut2G00	G:0-138
1g	1ut2I00	I:0-138
1h	1ut2H00	H:0-139
1i	1ut2A00	A:0-138

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Adhesin (36)

Family: Adhesin_Dr (9)

Escherichia coli (9)

1a	Adhesin_Dr-1ut2I01	I:2-138
1b	Adhesin_Dr-1ut2I02	I:2-138
1c	Adhesin_Dr-1ut2I03	I:2-138
1d	Adhesin_Dr-1ut2I04	I:2-138
1e	Adhesin_Dr-1ut2I05	I:2-138
1f	Adhesin_Dr-1ut2I06	I:2-138
1g	Adhesin_Dr-1ut2I07	I:2-138
1h	Adhesin_Dr-1ut2I08	I:2-138
1i	Adhesin_Dr-1ut2I09	I:2-138

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H,I (AFAE3_ECOLX | Q57254)

cellular component
	GO:0009289		pilus		A proteinaceous hair-like appendage on the surface of bacteria ranging from 2-8 nm in diameter.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Ala H:138 - Lys H:139	[ RasMol ]
		Asp B:25 - Leu B:26	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

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	1ut2
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
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	AFAE3_ECOLX \| Q57254
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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
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	AFAE3_ECOLX \| Q57254
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UniProtKB/Swiss-Prot
	AFAE3_ECOLX \| Q57254	:	1rxl 1usz 2ixq 2ver

1usq	COMPLEX OF E. COLI DRAE ADHESIN WITH CHLORAMPHENICOL
1usz	SEMET AFAE-3 ADHESIN FROM ESCHERICHIA COLI
1ut1	DRAE ADHESIN FROM ESCHERICHIA COLI

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 3)

Sites (3, 3)

SS Bonds (9, 9)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (2, 18)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 9)

CATH Domains (1, 9)

Pfam Domains (1, 9)

Gene Ontology (1, 1)

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File