Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  ATP PHOSPHORIBOSYL TRANSFERASE (HISG:HISZ) COMPLEX FROM THERMOTOGA MARITIMA
 
Authors :  M. C. Vega, F. J. Fernandez, G. E. Murphy, P. Zou, A. Popov, M. Wilmanns
Date :  01 Dec 03  (Deposition) - 15 Dec 04  (Release) - 10 Sep 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.52
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Transferase, Atp Phosphoribosyl Transferase, Aminoacyl-Trna Synthetase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. C. Vega, P. Zou, F. J. Fernandez, G. E. Murphy, R. Sterner, A. Popov, M. Wilmanns
Regulation Of The Hetero-Octameric Atp Phosphoribosyl Transferase Complex From Thermotoga Maritima By A Trna Synthetase-Like Subunit.
Mol. Microbiol. V. 55 675 2005
PubMed-ID: 15660995  |  Reference-DOI: 10.1111/J.1365-2958.2004.04422.X

(-) Compounds

Molecule 1 - ATP PHOSPHORIBOSYLTRANSFERASE REGULATORY SUBUNIT
    Chains: A, B, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: B834(DE3)
    Expression System Taxid: 562
    Expression System Vector: PET21, PET28
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 243274
    Strain: MSB8
 
Molecule 2 - ATP PHOSPHORIBOSYLTRANSFERASE REGULATORY SUBUNIT
    Chains: C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: B834(DE3)
    Expression System Taxid: 562
    Expression System Vector: PET21, PET28
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 243274
    Strain: MSB8
 
Molecule 3 - ATP PHOSPHORIBOSYLTRANSFERASE
    Chains: E, F, G
    EC Number: 2.4.2.17
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: B834(DE3)
    Expression System Taxid: 562
    Expression System Vector: PET21, PET28
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 243274
    Strain: MSB8
 
Molecule 4 - ATP PHOSPHORIBOSYLTRANSFERASE
    Chains: H
    EC Number: 2.4.2.17
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: B834(DE3)
    Expression System Taxid: 562
    Expression System Vector: PET21, PET28
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 243274
    Strain: MSB8

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit : ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 14)

Asymmetric/Biological Unit (2, 14)
No.NameCountTypeFull Name
1HIS8Mod. Amino AcidHISTIDINE
2PO46Ligand/IonPHOSPHATE ION

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR E:149 , GLU E:150 , THR E:151 , GLY E:152 , ARG E:153 , THR E:154BINDING SITE FOR RESIDUE PO4 E1202
02AC2SOFTWARELYS E:108 , GLY E:131 , SER E:132 , LYS F:8BINDING SITE FOR RESIDUE PO4 E1203
03AC3SOFTWAREGLU F:150 , THR F:151 , GLY F:152 , ARG F:153 , THR F:154BINDING SITE FOR RESIDUE PO4 F1203
04AC4SOFTWAREGLU G:150 , THR G:151 , GLY G:152 , ARG G:153 , THR G:154BINDING SITE FOR RESIDUE PO4 G1204
05AC5SOFTWARELYS G:108 , GLY G:131 , SER G:132 , HOH G:2024 , ARG H:45BINDING SITE FOR RESIDUE PO4 G1205
06AC6SOFTWARETHR H:149 , GLU H:150 , THR H:151 , GLY H:152 , ARG H:153 , THR H:154BINDING SITE FOR RESIDUE PO4 H1202
07AC7SOFTWARELYS C:157 , LEU C:159 , ILE C:184 , TYR C:185 , PRO G:78 , TYR G:180 , GLN G:195BINDING SITE FOR RESIDUE HIS C1275
08AC8SOFTWARETYR D:185 , LEU F:191 , GLN F:195BINDING SITE FOR RESIDUE HIS D1276
09AC9SOFTWARELYS B:157 , ILE B:184 , PRO E:78 , TYR E:180 , HOH E:2020BINDING SITE FOR RESIDUE HIS E1204
10BC1SOFTWAREGLU B:161 , THR E:65 , ARG E:170 , HIS E:172BINDING SITE FOR RESIDUE HIS E1205
11BC2SOFTWAREGLU D:161 , THR F:65 , LEU F:68 , GLN F:77 , ARG F:170 , HIS F:172BINDING SITE FOR RESIDUE HIS F1204
12BC3SOFTWAREASN C:158 , THR G:65 , GLN G:77 , ARG G:170 , HIS G:172 , HOH G:2025 , HOH G:2026 , HOH G:2027BINDING SITE FOR RESIDUE HIS G1206
13BC4SOFTWAREILE A:184 , TYR A:185 , ILE H:76 , PRO H:78 , TYR H:180 , LEU H:191 , GLN H:195BINDING SITE FOR RESIDUE HIS H1203
14BC5SOFTWAREGLU A:161 , HOH A:2023 , THR H:65 , GLN H:77 , ARG H:170 , HIS H:172BINDING SITE FOR RESIDUE HIS H1204

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1E:117 -E:124
2F:117 -F:124
3G:117 -G:124
4H:117 -H:124

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Val A:98 -Pro A:99
2Val B:98 -Pro B:99
3Val C:98 -Pro C:99
4Val D:98 -Pro D:99

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1USY)

(-) PROSITE Motifs  (1, 4)

Asymmetric/Biological Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ATP_P_PHORIBOSYLTRPS01316 ATP phosphoribosyltransferase signature.HIS1_THEMA134-155
 
 
 		  4E:134-155
F:134-155
G:134-155
H:134-155

(-) Exons   (0, 0)

(no "Exon" information available for 1USY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:275
 aligned with HISZ_THEMA | Q9X0D3 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:275
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270     
          HISZ_THEMA      1 MDFLDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGVYEDLLKEIPKDLHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRLVAAGGEYTVNGEKGVGGSIFLEGKTC  275
               SCOP domains d1usya_ A: ATP phosphoribosyltransferase regulatory subunit HisZ                                                                                                                                                                                                                    SCOP domains
               CATH domains 1usyA00 A:1-275 Bira Bifunctional Protein; Domain 2                                                                                                                                                                                                                                 CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhh..ee.....eee........eee....eeee..hhhhhhhhhhh.......eeee..eeeeeee..eeeeeeeeeeeee...hhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhh.hhhhhhh...hhhhhhhhhhhhhhhhhhh...eeee...hhhhhhh...eeeeeee....eeeeeeeeeee..eeeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1usy A    1 MDFLDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGVYEDLLKEIPKDLHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRLVAAGGEYTVNGEKGVGGSIFLEGKTC  275
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270     


Chain B from PDB  Type:PROTEIN  Length:275
 aligned with HISZ_THEMA | Q9X0D3 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:275
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270     
          HISZ_THEMA      1 MDFLDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGVYEDLLKEIPKDLHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRLVAAGGEYTVNGEKGVGGSIFLEGKTC  275
               SCOP domains d1usyb_ B: ATP phosphoribosyltransferase regulatory subunit HisZ                                                                                                                                                                                                                    SCOP domains
               CATH domains 1usyB00 B:1-275 Bira Bifunctional Protein; Domain 2                                                                                                                                                                                                                                 CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh....ee.....eeee.......eee....eeee..hhhhhhhhhhhh......eeeeeeeeeeeee..eeeeeeeeeeeee...hhhhhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhh...hhhhhhhhhhhhhhhhhhh...eeee...hhhhh.....eeeeeee....eeeeeeeeee....eeeeeeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1usy B    1 MDFLDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGVYEDLLKEIPKDLHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRLVAAGGEYTVNGEKGVGGSIFLEGKTC  275
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270     


Chain C from PDB  Type:PROTEIN  Length:276
 aligned with HISZ_THEMA | Q9X0D3 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:276
                                                                                                                                                                                                                                                                                                            275 
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    | 
          HISZ_THEMA      1 MDFLDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGVYEDLLKEIPKDLHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRLVAAGGEYTVNGEKGVGGSIFLEGKTC-    -
               SCOP domains d1usyc_ C: ATP phosphoribosyltransferase regulatory subunit HisZ                                                                                                                                                                                                                     SCOP domains
               CATH domains 1usyC00 C:1-275 Bira Bifunctional Protein; Domain 2                                                                                                                                                                                                                                - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhh..........eeee......eeee....eeee..hhhhhhhhh............eeeeeeeeee..eeeeeeeeeeee....hhhhhhhhhhhhhhhhhhhh...eeeeeee...........hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhh..hhhhhhhhhhhhhhhhhhh...eeee.............eeeeeee....eeeeeeeee......eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1usy C    1 MDFLDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPESQIKVWYADFVYRYSGSDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGLYEDLLKEIPKDLHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRLVAAGGEYTVNGEKGVGGSIFLEGKTCH 1275
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    ||
                                                                                                                                                                                                                                                                                                            275|
                                                                                                                                                                                                                                                                                                            1275


Chain D from PDB  Type:PROTEIN  Length:275
 aligned with HISZ_THEMA | Q9X0D3 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:275
                                                                                                                                                                                                                                                                                                           275 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271   | 
          HISZ_THEMA      2 DFLDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGVYEDLLKEIPKDLHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRLVAAGGEYTVNGEKGVGGSIFLEGKTC-    -
               SCOP domains d1usyd_ D: ATP phosphoribosyltransferase regulatory subunit HisZ                                                                                                                                                                                                                    SCOP domains
               CATH domains 1usyD00 D:2-275 Bira Bifunctional Protein; Domain 2                                                                                                                                                                                                                               - CATH domains
           Pfam domains (1) -------------tRNA-synt_His-1usyD01 D:15-271                                                                                                                                                                                                                                   ----- Pfam domains (1)
           Pfam domains (2) -------------tRNA-synt_His-1usyD02 D:15-271                                                                                                                                                                                                                                   ----- Pfam domains (2)
           Pfam domains (3) -------------tRNA-synt_His-1usyD03 D:15-271                                                                                                                                                                                                                                   ----- Pfam domains (3)
           Pfam domains (4) -------------tRNA-synt_His-1usyD04 D:15-271                                                                                                                                                                                                                                   ----- Pfam domains (4)
         Sec.struct. author ..hhhhhhhhhhhhhhhh..ee.....eee........eee....eeee..hhhhhhhhhhhhh.....eeeeeeeeeeeee..eeeeeeeeeeeee....hhhhhhhhhhhhhhhhhhh...eeeeeee...hhhhhh.....hhhhhhhhhhh.hhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhh....hhhhhhhhhhhhhhhhhhh...eeee...hhhhhhh...eeeeeee....eeeeeeeeee....eeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1usy D    2 DFLDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSDLVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGPVIVEIGHTGVYEDLLKEIPKDLHEKVLNLIDTKNLAEIEFLSHMKKIDLSRVEKIIEDSIYRRSPEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRLVAAGGEYTVNGEKGVGGSIFLEGKTCH 1276
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271   ||
                                                                                                                                                                                                                                                                                                           275|
                                                                                                                                                                                                                                                                                                           1276


Chain E from PDB  Type:PROTEIN  Length:202
 aligned with HIS1_THEMA | Q9X0D2 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:202
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200  
          HIS1_THEMA      1 MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEHDS  202
               SCOP domains d1usye_ E: ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain                                                                                                                              SCOP domains
               CATH domains 1usyE01 E:1-85,E:168-202 Periplasmic binding protein-like II                         1usyE02 E:86-167 Periplasmic binding protein-like II                              1usyE01 E:1-85,E:168-202            CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhhhh....ee...eeee..eeeeeehhhhhhhhhhh....eeeeehhhhhhh........eeeeeeeeeeeeee........eeeeee.hhhhhhhhhhh...eeeeee...hhhhh.......eeeeee..hhhhhhh.eeeeeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------ATP_P_PHORIBOSYLTR    ----------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1usy E    1 MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEHDS  202
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200  


Chain F from PDB  Type:PROTEIN  Length:203
 aligned with HIS1_THEMA | Q9X0D2 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:203
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200   
          HIS1_THEMA      1 MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEHDSN  203
               SCOP domains d1usyf_ F: ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain                                                                                                                               SCOP domains
               CATH domains 1usyF01 F:1-85,F:168-203 Periplasmic binding protein-like II                         1usyF02 F:86-167 Periplasmic binding protein-like II                              1usyF01 F:1-85,F:168-203             CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhh...........eeee..eeeeeehhhhhhhhhhh....eeeeehhhhhhh........eeeeeeeeeeeeee..........eeee.hhhhhhhhhhhh....eeee.....hhhhhh....eeeeee...hhhhhh.eeeeeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------ATP_P_PHORIBOSYLTR    ------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1usy F    1 MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEHDSN  203
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200   


Chain G from PDB  Type:PROTEIN  Length:204
 aligned with HIS1_THEMA | Q9X0D2 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:204
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          HIS1_THEMA      1 MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEHDSNE  204
               SCOP domains d1usyg_ G: ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain                                                                                                                                SCOP domains
               CATH domains 1usyG01 G:1-85,G:168-204 Periplasmic binding protein-like II                         1usyG02 G:86-167 Periplasmic binding protein-like II                              1usyG01 G:1-85,G:168-204              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhh......ee...eee...eeeeeehhhhhhhhhhh....eeeeehhhhhhh........eeeeeeeeeeeeee.........eeeee.hhhhhhhhhhhh...eeeee...............eeeeee..hhhhhh..eeeeeeeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------ATP_P_PHORIBOSYLTR    ------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1usy G    1 MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEHDSNE  204
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    


Chain H from PDB  Type:PROTEIN  Length:202
 aligned with HIS1_THEMA | Q9X0D2 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:202
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200  
          HIS1_THEMA      1 MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEHDS  202
               SCOP domains d1usyh_ H: ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain                                                                                                                              SCOP domains
               CATH domains 1usyH01 H:1-85,H:168-202 Periplasmic binding protein-like II                         1usyH02 H:86-167 Periplasmic binding protein-like II                              1usyH01 H:1-85,H:168-202            CATH domains
           Pfam domains (1) -------------------------------------------HisG-1usyH01 H:44-198                                                                                                                                      ---- Pfam domains (1)
           Pfam domains (2) -------------------------------------------HisG-1usyH02 H:44-198                                                                                                                                      ---- Pfam domains (2)
           Pfam domains (3) -------------------------------------------HisG-1usyH03 H:44-198                                                                                                                                      ---- Pfam domains (3)
           Pfam domains (4) -------------------------------------------HisG-1usyH04 H:44-198                                                                                                                                      ---- Pfam domains (4)
         Sec.struct. author .eeeeee...hhhhhhhhhhh......ee...eeee..eeeeeehhhhhhhhhhh....eeeeehhhhhhh........eeeeeeeeeeeeee........eeeeee.hhhhhhhhhhhh..eeeeee...............eeeeee..hhhhhhh.eeeeeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------ATP_P_PHORIBOSYLTR    ----------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1usy H    1 MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREKVVSFLEKLQEVIEHDS  202
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Clan: PBP (391)
(-)
Family: HisG (10)
(-)
Thermotoga maritima (3)
1aHisG-1usyH01H:44-198
1bHisG-1usyH02H:44-198
1cHisG-1usyH03H:44-198
1dHisG-1usyH04H:44-198
(-)
Clan: tRNA_synt_II (64)

(-) Gene Ontology  (8, 11)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (HISZ_THEMA | Q9X0D3)
biological process
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0000105    histidine biosynthetic process    The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain E,F,G,H   (HIS1_THEMA | Q9X0D2)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0003879    ATP phosphoribosyltransferase activity    Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + diphosphate = ATP + 5-phospho-alpha-D-ribose 1-diphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016757    transferase activity, transferring glycosyl groups    Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
biological process
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0000105    histidine biosynthetic process    The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    HIS  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Val A:98 - Pro A:99   [ RasMol ]  
    Val B:98 - Pro B:99   [ RasMol ]  
    Val C:98 - Pro C:99   [ RasMol ]  
    Val D:98 - Pro D:99   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1usy
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  HIS1_THEMA | Q9X0D2
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  HISZ_THEMA | Q9X0D3
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.4.2.17
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  HIS1_THEMA | Q9X0D2
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  HISZ_THEMA | Q9X0D3
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HIS1_THEMA | Q9X0D2: 1o63 1o64

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1USY)