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(-) Description

Title :  TERNARY COMPLEX OF A CALCINEURIN A FRAGMENT, CALCINEURIN B, FKBP12 AND THE IMMUNOSUPPRESSANT DRUG FK506 (TACROLIMUS)
 
Authors :  J. P. Griffith, J. L. Kim, E. E. Kim, M. D. Sintchak, J. A. Thomson, M. J. Fitzgibbon, M. A. Fleming, P. R. Caron, K. Hsiao, M. A. Navia
Date :  21 Aug 96  (Deposition) - 12 Feb 97  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Complex (Hydrolase/Isomerase), Immunosuppressant (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. P. Griffith, J. L. Kim, E. E. Kim, M. D. Sintchak, J. A. Thomson, M. J. Fitzgibbon, M. A. Fleming, P. R. Caron, K. Hsiao, M. A. Navia
X-Ray Structure Of Calcineurin Inhibited By The Immunophilin-Immunosuppressant Fkbp12-Fk506 Complex.
Cell(Cambridge, Mass. ) V. 82 507 1995
PubMed-ID: 7543369  |  Reference-DOI: 10.1016/0092-8674(95)90439-5
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - SERINE/THREONINE PHOSPHATASE B2
    ChainsA
    EC Number3.1.3.16
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentCHAIN A IS THE CATALYTIC SUBUNIT, RESIDUES 18 - 392. CHAIN B IS THE REGULATORY SUBUNIT, RESIDUES 1 - 169
    Organism CommonCATTLE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCALCINEURIN A, CAM-PRP CATALYTIC SUBUNIT, CALCINEURIN B, CAM-PRP REGULATORY SUBUNIT
    TissueCALF BRAIN
 
Molecule 2 - SERINE/THREONINE PHOSPHATASE B2
    ChainsB
    EC Number3.1.3.16
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentCHAIN A IS THE CATALYTIC SUBUNIT, RESIDUES 18 - 392. CHAIN B IS THE REGULATORY SUBUNIT, RESIDUES 1 - 169
    Organism CommonCATTLE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCALCINEURIN A, CAM-PRP CATALYTIC SUBUNIT, CALCINEURIN B, CAM-PRP REGULATORY SUBUNIT
    TissueCALF BRAIN
 
Molecule 3 - FK506-BINDING PROTEIN
    ChainsC
    EC Number5.2.1.8
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism CommonCATTLE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymFKBP-12, CIS-TRANS ISOMERASE

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 9)

Asymmetric/Biological Unit (6, 9)
No.NameCountTypeFull Name
1CA4Ligand/IonCALCIUM ION
2FE1Ligand/IonFE (III) ION
3FK51Ligand/Ion8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN
4MYR1Ligand/IonMYRISTIC ACID
5PO41Ligand/IonPHOSPHATE ION
6ZN1Ligand/IonZINC ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01506UNKNOWNTRP A:352 , SER A:353 , PHE A:356 , LEU B:115 , MET B:118 , VAL B:119 , TYR C:26 , PHE C:36 , ASP C:37 , PHE C:46 , GLU C:54 , VAL C:55 , ILE C:56 , TRP C:59 , HIS C:87 , ILE C:91 , TYR C:82 , PHE C:99THE FK506 BINDING SITE ON FKBP12 (SUBUNIT C) AS WELL AS FK506 CONTACTS MADE TO CALCINEURIN-A (SUBUNIT A) AND CALCINEURIN-B (SUBUNIT B).
02AC1SOFTWAREASP B:30 , ASP B:32 , SER B:34 , SER B:36 , GLU B:41BINDING SITE FOR RESIDUE CA B 501
03AC2SOFTWAREASP B:62 , ASP B:64 , ASN B:66 , GLU B:68 , GLU B:73BINDING SITE FOR RESIDUE CA B 502
04AC3SOFTWAREASP B:99 , ASP B:101 , ASP B:103 , TYR B:105 , GLU B:110 , HOH B:619BINDING SITE FOR RESIDUE CA B 503
05AC4SOFTWAREASP B:140 , ASP B:142 , ASP B:144 , ARG B:146 , GLU B:151 , HOH B:636BINDING SITE FOR RESIDUE CA B 504
06AC5SOFTWAREASP A:90 , ASP A:118 , ASN A:150 , HIS A:199 , HIS A:281 , FE A:506 , PO4 A:507BINDING SITE FOR RESIDUE ZN A 505
07AC6SOFTWAREASP A:90 , HIS A:92 , ASP A:118 , ZN A:505 , PO4 A:507BINDING SITE FOR RESIDUE FE A 506
08AC7SOFTWAREHIS A:92 , ASP A:118 , ARG A:122 , ASN A:150 , HIS A:151 , ARG A:254 , HIS A:281 , TYR A:311 , ZN A:505 , FE A:506 , HOH A:524 , HOH A:663BINDING SITE FOR RESIDUE PO4 A 507
09AC8SOFTWARELYS A:323 , GLU A:325 , ASN A:326 , VAL A:328 , ASN A:330 , GLY B:1 , ALA B:16 , ILE B:19 , LYS B:20 , GLY B:35 , PHE B:71BINDING SITE FOR RESIDUE MYR B 508
10AC9SOFTWARETRP A:352 , SER A:353 , PHE A:356 , HOH B:516 , TYR C:26 , PHE C:36 , ASP C:37 , ARG C:42 , PHE C:46 , VAL C:55 , ILE C:56 , TRP C:59 , ALA C:81 , TYR C:82 , HIS C:87 , ILE C:91 , PHE C:99 , HOH C:511 , HOH C:520BINDING SITE FOR RESIDUE FK5 C 509

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1TCO)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ala A:83 -Pro A:84

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1TCO)

(-) PROSITE Motifs  (4, 10)

Asymmetric/Biological Unit (4, 10)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FKBP_PPIASEPS50059 FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.FKB1A_BOVIN20-108  1C:19-107
FKB1A_HUMAN20-108  1C:19-107
2EF_HAND_1PS00018 EF-hand calcium-binding domain.CANB1_BOVIN31-43
63-75
100-112
141-153
  4B:30-42
B:62-74
B:99-111
B:140-152
3EF_HAND_2PS50222 EF-hand calcium-binding domain profile.CANB1_BOVIN50-85
18-46
87-122
128-163
  4B:49-84
B:17-45
B:86-121
B:127-162
4SER_THR_PHOSPHATASEPS00125 Serine/threonine specific protein phosphatases signature.PP2BA_BOVIN147-152  1A:147-152

(-) Exons   (18, 18)

Asymmetric/Biological Unit (18, 18)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENSBTAT000000140381ENSBTAE00000263179chr11:68574903-6857484559CANB1_BOVIN1-110--
1.2ENSBTAT000000140382ENSBTAE00000114555chr11:68539387-6853934840CANB1_BOVIN2-15141B:1-1414
1.3ENSBTAT000000140383ENSBTAE00000114558chr11:68523111-68522935177CANB1_BOVIN15-74601B:14-7360
1.4ENSBTAT000000140384ENSBTAE00000114561chr11:68521880-6852182160CANB1_BOVIN74-94211B:73-9321
1.5ENSBTAT000000140385ENSBTAE00000114563chr11:68520466-68520282185CANB1_BOVIN94-155621B:93-15462
1.6ENSBTAT000000140386ENSBTAE00000114566chr11:68515638-68515319320CANB1_BOVIN156-170151B:155-16915

2.1ENSBTAT000000213051ENSBTAE00000360847chr6:25107072-25107376305PP2BA_BOVIN1-20200--
2.2ENSBTAT000000213052ENSBTAE00000173999chr6:25279713-25279913201PP2BA_BOVIN20-87681A:21-8767
2.3ENSBTAT000000213053ENSBTAE00000174006chr6:25354424-25354548125PP2BA_BOVIN87-128421A:87-12842
2.4ENSBTAT000000213054ENSBTAE00000418429chr6:25362783-25362894112PP2BA_BOVIN129-166381A:129-16638
2.5ENSBTAT000000213055ENSBTAE00000174015chr6:25365348-25365493146PP2BA_BOVIN166-214491A:166-21449
2.6ENSBTAT000000213056ENSBTAE00000174017chr6:25368554-25368693140PP2BA_BOVIN215-261471A:215-26147
2.7ENSBTAT000000213057ENSBTAE00000401592chr6:25377988-2537806578PP2BA_BOVIN261-287271A:261-28727
2.8ENSBTAT000000213058ENSBTAE00000378701chr6:25382539-2538263395PP2BA_BOVIN287-319331A:287-31933
2.9ENSBTAT000000213059ENSBTAE00000377567chr6:25400282-25400407126PP2BA_BOVIN319-361431A:319-36143
2.10ENSBTAT0000002130510ENSBTAE00000174028chr6:25403014-2540308875PP2BA_BOVIN361-386261A:361-37212
2.11ENSBTAT0000002130511ENSBTAE00000174032chr6:25421535-2542161985PP2BA_BOVIN386-414290--
2.12ENSBTAT0000002130512ENSBTAE00000174039chr6:25423359-2542345698PP2BA_BOVIN414-447340--
2.13ENSBTAT0000002130513ENSBTAE00000384175chr6:25426566-2542659530PP2BA_BOVIN447-457110--
2.14ENSBTAT0000002130514ENSBTAE00000174049chr6:25429734-25430471738PP2BA_BOVIN457-521650--

3.1aENST000004001371aENSE00001561754chr20:1373806-1373606201FKB1A_HUMAN1-13131C:1-1212
3.1fENST000004001371fENSE00001107838chr20:1373525-137347848FKB1A_HUMAN13-29171C:12-2817
3.4ENST000004001374ENSE00000858591chr20:1356247-1356135113FKB1A_HUMAN29-66381C:28-6538
3.5aENST000004001375aENSE00000858590chr20:1352884-1352720165FKB1A_HUMAN67-108421C:66-10742
3.7fENST000004001377fENSE00001872186chr20:1350716-13496221095FKB1A_HUMAN-00--

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:352
 aligned with PP2BA_BOVIN | P48452 from UniProtKB/Swiss-Prot  Length:521

    Alignment length:352
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370  
          PP2BA_BOVIN    21 VPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEETVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNIC 372
               SCOP domains d1tcoa_ A: Protein phosphatase-2B (PP-2B, calcineurin A subunit)                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 1tcoA00 A:21-372  [code=3.60.21.10, no name defined]                                                                                                                                                                                                                                                                                                             CATH domains
               Pfam domains --------------------------------------------------------------Metallophos-1tcoA01 A:83-285                                                                                                                                                                               --------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) ..........hhhh........hhhhhhhhhh.....hhhhhhhhhhhhhhhhh...eeee...eeee......hhhhhhhhhhh.......eee..........hhhhhhhhhhhhhh....eee.......hhhhhh..hhhhhhhh..hhhhhhhhhhhhh...---hhh.eee...........hhhhh............hhhhhhh...............eee.......eee.hhhhhhhhhhh...eeee........eee...........eeee.....hhh.....eeeeeee..eeeeeee.........hhh..hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author (1)
     Sec.struct. author (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Sec.struct. author (2)
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------SER_TH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
           Transcript 2 (1) Exon 2.2  PDB: A:21-87 UniProt: 20-87 [INCOMPLETE]                 -----------------------------------------Exon 2.4  PDB: A:129-166              ------------------------------------------------Exon 2.6  PDB: A:215-261 UniProt: 215-261      -------------------------Exon 2.8  PDB: A:287-319         -----------------------------------------Exon 2.10    Transcript 2 (1)
           Transcript 2 (2) ------------------------------------------------------------------Exon 2.3  PDB: A:87-128 UniProt: 87-128   -------------------------------------Exon 2.5  PDB: A:166-214 UniProt: 166-214        ----------------------------------------------Exon 2.7  PDB: A:261-287   -------------------------------Exon 2.9  PDB: A:319-361 UniProt: 319-361  ----------- Transcript 2 (2)
                 1tco A  21 VPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEETVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNIC 372
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370  

Chain B from PDB  Type:PROTEIN  Length:169
 aligned with CANB1_BOVIN | P63099 from UniProtKB/Swiss-Prot  Length:170

    Alignment length:169
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161         
          CANB1_BOVIN     2 GNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV 170
               SCOP domains d1tcob_ B: Calcineurin regulatory subunit (B-chain)                                                                                                                       SCOP domains
               CATH domains 1tcoB00 B:1-169 EF-hand                                                                                                                                                   CATH domains
           Pfam domains (1) ---------------------EF_hand_3-1tcoB01 B:22-46-------------------------------------------EF_hand_5-1tcoB02 B:90-156                                         ------------- Pfam domains (1)
           Pfam domains (2) -----------------------------------------------------------------------------------------EF_hand_5-1tcoB03 B:90-156                                         ------------- Pfam domains (2)
           Pfam domains (3) -----------------------------------------------------------------------------------------efhand-1tcoB04 B:90-118      --------------------------------------------------- Pfam domains (3)
         Sec.struct. author ...............hhhhhhhhhhhhhhh........hhhh...........hhhhhhhh.........hhhhhhhhhhh.....hhhhhhhhhhhh.........hhhhhhhhhhhh.....hhhhhhhhhhhhhhh.........hhhhhhhh....hhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------EF_HAND_2  PDB: B:127-162           ------- PROSITE (2)
                PROSITE (3) -----------------------------EF_HAND_1    -------------------EF_HAND_1    ------------------------EF_HAND_1    ---------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------EF_HAND_2  PDB: B:17-45      ---EF_HAND_2  PDB: B:49-84             -EF_HAND_2  PDB: B:86-121            ------------------------------------------------ PROSITE (4)
                PROSITE (1) -------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_1    ----------------- PROSITE (1)
           Transcript 1 (1) Exon 1.2      ----------------------------------------------------------Exon 1.4  PDB: B:73-9-------------------------------------------------------------Exon 1.6        Transcript 1 (1)
           Transcript 1 (2) -------------Exon 1.3  PDB: B:14-73 UniProt: 15-74                       -------------------Exon 1.5  PDB: B:93-154 UniProt: 94-155                       --------------- Transcript 1 (2)
                 1tco B   1 GNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV 169
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160         

Chain C from PDB  Type:PROTEIN  Length:107
 aligned with FKB1A_BOVIN | P18203 from UniProtKB/Swiss-Prot  Length:108

    Alignment length:107
                                    11        21        31        41        51        61        71        81        91       101       
          FKB1A_BOVIN     2 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE 108
               SCOP domains d1tcoc_ C: Calcineurin (FKBP12.6)                                                                           SCOP domains
               CATH domains 1tcoC00 C:1-107  [code=3.10.50.40, no name defined]                                                         CATH domains
               Pfam domains -----------FKBP_C-1tcoC01 C:12-104                                                                      --- Pfam domains
         Sec.struct. author .eeeeeee............eeeeeeeeee....eeeehhh....eeee.......hhhhhhhhh.....eeeeee.hhh................eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------FKBP_PPIASE  PDB: C:19-107 UniProt: 20-108                                                PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 1tco C   1 GVQVETISPGDGRTFPKAGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE 107
                                    10        20        30        40        50        60        70        80        90       100       

Chain C from PDB  Type:PROTEIN  Length:107
 aligned with FKB1A_HUMAN | P62942 from UniProtKB/Swiss-Prot  Length:108

    Alignment length:107
                                    11        21        31        41        51        61        71        81        91       101       
          FKB1A_HUMAN     2 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE 108
               SCOP domains d1tcoc_ C: Calcineurin (FKBP12.6)                                                                           SCOP domains
               CATH domains 1tcoC00 C:1-107  [code=3.10.50.40, no name defined]                                                         CATH domains
               Pfam domains -----------FKBP_C-1tcoC01 C:12-104                                                                      --- Pfam domains
         Sec.struct. author .eeeeeee............eeeeeeeeee....eeeehhh....eeee.......hhhhhhhhh.....eeeeee.hhh................eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------FKBP_PPIASE  PDB: C:19-107 UniProt: 20-108                                                PROSITE
           Transcript 3 (1) Exon 3.1a   ---------------Exon 3.4  PDB: C:28-65 UniProt: 29-66 Exon 3.5a  PDB: C:66-107 UniProt: 67-108   Transcript 3 (1)
           Transcript 3 (2) -----------Exon 3.1f        ------------------------------------------------------------------------------- Transcript 3 (2)
                 1tco C   1 GVQVETISPGDGRTFPKAGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE 107
                                    10        20        30        40        50        60        70        80        90       100       

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 3)

Asymmetric/Biological Unit

(-) CATH Domains  (3, 3)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (5, 6)

Asymmetric/Biological Unit
(-)
Clan: EF_hand (270)

(-) Gene Ontology  (81, 101)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (PP2BA_BOVIN | P48452)
molecular function
    GO:0005516    calmodulin binding    Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
    GO:0033192    calmodulin-dependent protein phosphatase activity    Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate, dependent on the presence of calcium-bound calmodulin.
    GO:0008144    drug binding    Interacting selectively and non-covalently with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
    GO:0019899    enzyme binding    Interacting selectively and non-covalently with any enzyme.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004721    phosphoprotein phosphatase activity    Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.
    GO:0046983    protein dimerization activity    The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
biological process
    GO:0000082    G1/S transition of mitotic cell cycle    The mitotic cell cycle transition by which a cell in G1 commits to S phase. The process begins with the build up of G1 cyclin-dependent kinase (G1 CDK), resulting in the activation of transcription of G1 cyclins. The process ends with the positive feedback of the G1 cyclins on the G1 CDK which commits the cell to S phase, in which DNA replication is initiated.
    GO:0033173    calcineurin-NFAT signaling cascade    Any intracellular signal transduction in which the signal is passed on within the cell by activation of a member of the NFAT protein family as a consequence of NFAT dephosphorylation by Ca(2+)-activated calcineurin. The cascade begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin dephosphorylates multiple phosphoserine residues on NFAT, resulting in the translocation of NFAT to the nucleus. The cascade ends with regulation of transcription by NFAT. The calcineurin-NFAT cascade lies downstream of many cell surface receptors, including G-protein coupled receptors (GPCRs) and receptor tyrosine kinases (RTKs) that signal to mobilize calcium ions (Ca2+).
    GO:0006816    calcium ion transport    The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0019722    calcium-mediated signaling    Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions.
    GO:0014898    cardiac muscle hypertrophy in response to stress    The physiological enlargement or overgrowth of all or part of the heart muscle due to an increase in size (not length) of individual cardiac muscle fibers, without cell division, as a result of a disturbance in organismal or cellular homeostasis.
    GO:0035690    cellular response to drug    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
    GO:0016311    dephosphorylation    The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
    GO:0060079    excitatory postsynaptic potential    A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.
    GO:0050804    modulation of chemical synaptic transmission    Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.
    GO:0033555    multicellular organismal response to stress    Any process that results in a change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
    GO:0035562    negative regulation of chromatin binding    Any process that stops or reduces the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
    GO:0050774    negative regulation of dendrite morphogenesis    Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite morphogenesis.
    GO:0051533    positive regulation of NFAT protein import into nucleus    Any process that activates or increases the frequency, rate or extent of the movement of an NFAT protein from the cytoplasm to the nucleus.
    GO:1903244    positive regulation of cardiac muscle hypertrophy in response to stress    Any process that activates or increases the frequency, rate or extent of cardiac muscle hypertrophy in response to stress.
    GO:0051091    positive regulation of sequence-specific DNA binding transcription factor activity    Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription.
    GO:0045944    positive regulation of transcription from RNA polymerase II promoter    Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
    GO:0006470    protein dephosphorylation    The process of removing one or more phosphoric residues from a protein.
    GO:0006606    protein import into nucleus    The directed movement of a protein from the cytoplasm to the nucleus.
    GO:0051592    response to calcium ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.
    GO:0048741    skeletal muscle fiber development    The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
    GO:0014883    transition between fast and slow fiber    The process of conversion of fast-contracting muscle fibers to a slower character. This may involve slowing of contractile rate, slow myosin gene induction, increase in oxidative metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.
cellular component
    GO:0030018    Z disc    Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
    GO:0005955    calcineurin complex    A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0098794    postsynapse    The part of a synapse that is part of the post-synaptic cell.
    GO:0042383    sarcolemma    The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.

Chain B   (CANB1_BOVIN | P63099)
molecular function
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0042383    sarcolemma    The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.

Chain C   (FKB1A_HUMAN | P62942)
molecular function
    GO:0005528    FK506 binding    Interacting selectively and non-covalently with the 23-membered macrolide lactone FK506.
    GO:0046332    SMAD binding    Interacting selectively and non-covalently with a SMAD signaling protein.
    GO:0048185    activin binding    Interacting selectively and non-covalently with activin, a dimer of inhibin-beta subunits.
    GO:0019855    calcium channel inhibitor activity    Stops, prevents, or reduces the activity of a calcium channel.
    GO:0044325    ion channel binding    Interacting selectively and non-covalently with one or more specific sites on an ion channel, a protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0005527    macrolide binding    Interacting selectively and non-covalently with a macrolide, any of a large group of structurally related antibiotics produced by Streptomyces species.
    GO:0003755    peptidyl-prolyl cis-trans isomerase activity    Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004871    signal transducer activity    Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
    GO:0005160    transforming growth factor beta receptor binding    Interacting selectively and non-covalently with the transforming growth factor beta receptor.
    GO:0034713    type I transforming growth factor beta receptor binding    Interacting selectively and non-covalently with a type I transforming growth factor beta receptor.
biological process
    GO:0006458    'de novo' protein folding    The process of assisting in the folding of a nascent peptide chain into its correct tertiary structure.
    GO:0007183    SMAD protein complex assembly    The aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins.
    GO:0042110    T cell activation    The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
    GO:1990000    amyloid fibril formation    The generation of amyloid fibrils, insoluble fibrous protein aggregates exhibiting beta sheet structure, from proteins. An example of this is seen when human RIP1 and RIP3 kinases form a heterodimeric functional amyloid signaling complex (PMID:22817896).
    GO:0070588    calcium ion transmembrane transport    A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
    GO:0061077    chaperone-mediated protein folding    The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.
    GO:0003007    heart morphogenesis    The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
    GO:0060347    heart trabecula formation    The process of creating a trabecula in the heart. A trabecula is a tissue element in the form of a small beam, strut or rod.
    GO:0051280    negative regulation of release of sequestered calcium ion into cytosol    Any process that stops, prevents, or reduces the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.
    GO:0060315    negative regulation of ryanodine-sensitive calcium-release channel activity    Any process that decreases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
    GO:0043123    positive regulation of I-kappaB kinase/NF-kappaB signaling    Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling.
    GO:0032092    positive regulation of protein binding    Any process that activates or increases the frequency, rate or extent of protein binding.
    GO:0031398    positive regulation of protein ubiquitination    Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0022417    protein maturation by protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that results in the attainment of the full functional capacity of a protein.
    GO:0000413    protein peptidyl-prolyl isomerization    The modification of a protein by cis-trans isomerization of a proline residue.
    GO:0042026    protein refolding    The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.
    GO:0032925    regulation of activin receptor signaling pathway    Any process that modulates the frequency, rate or extent of the activity of any activin receptor signaling pathway.
    GO:1902991    regulation of amyloid precursor protein catabolic process    Any process that modulates the frequency, rate or extent of amyloid precursor protein catabolic process.
    GO:0050776    regulation of immune response    Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.
    GO:0032880    regulation of protein localization    Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.
    GO:0060314    regulation of ryanodine-sensitive calcium-release channel activity    Any process that modulates the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
    GO:0007179    transforming growth factor beta receptor signaling pathway    A series of molecular signals initiated by the binding of an extracellular ligand to a transforming growth factor beta receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
    GO:0055010    ventricular cardiac muscle tissue morphogenesis    The process in which the anatomical structures of cardiac ventricle muscle is generated and organized.
cellular component
    GO:0030018    Z disc    Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0031012    extracellular matrix    A structure lying external to one or more cells, which provides structural support for cells or tissues.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0014802    terminal cisterna    The portion of sarcoplasmic reticulum devoted to calcium ion storage and calcium ion release.

Chain C   (FKB1A_BOVIN | P18203)
molecular function
    GO:0005528    FK506 binding    Interacting selectively and non-covalently with the 23-membered macrolide lactone FK506.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0003755    peptidyl-prolyl cis-trans isomerase activity    Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
biological process
    GO:0042110    T cell activation    The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
    GO:0061077    chaperone-mediated protein folding    The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0000413    protein peptidyl-prolyl isomerization    The modification of a protein by cis-trans isomerization of a proline residue.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FKB1A_BOVIN | P182031fkk 1fkl
        FKB1A_HUMAN | P629421a7x 1b6c 1bkf 1bl4 1d6o 1d7h 1d7i 1d7j 1eym 1f40 1fap 1fkb 1fkd 1fkf 1fkg 1fkh 1fki 1fkj 1fkr 1fks 1fkt 1j4h 1j4i 1j4r 1nsg 1qpf 1qpl 2dg3 2dg4 2dg9 2fap 2fke 2nd5 2ppn 2ppo 2ppp 2rse 3fap 3h9r 3mdy 4dh0 4fap 4ipx 4n19 4odp 4odq 4odr 5i7p 5i7q
        PP2BA_BOVIN | P484522f2o 2f2p

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1TCO)