1RPM - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   HUMAN RECEPTOR PROTEIN TYROSINE PHOSPHATASE MU, DOMAIN 1

Authors :   K. M. V. Hoffmann, N. K. Tonks, D. Barford

Date :   11 Sep 97 (Deposition) - 01 Apr 98 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Receptor, Phosphatase, Signal Transduction, Adhesion, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. M. Hoffmann, N. K. Tonks, D. Barford
The Crystal Structure Of Domain 1 Of Receptor Protein-Tyrosine Phosphatase Mu.
J. Biol. Chem. V. 272 27505 1997
PubMed-ID: 9346878 | Reference-DOI: 10.1074/JBC.272.44.27505
(for further references see the PDB file header)

Molecule 1 - RECEPTOR PROTEIN TYROSINE PHOSPHATASE MU
	Chains	:	A, B
	EC Number	:	3.1.3.48
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	B834
	Expression System Taxid	:	562
	Fragment	:	CYTOSOLIC MEMBRANE PROXIMAL CATALYTIC DOMAIN
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	D1

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 1RPM)

Asymmetric Unit (1, 1)

No.	Name	Evidence	Residues	Description
1	ATE	UNKNOWN	CYS A:1095	ACTIVE SITE CYSTEINE.

(no "SS Bond" information available for 1RPM)

(no "Cis Peptide Bond" information available for 1RPM)

(no "SAP(SNP)/Variant" information available for 1RPM)

Asymmetric Unit (3, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TYR_PHOSPHATASE_PTP	PS50055	PTP type protein phosphatase family profile.	PTPRM_HUMAN	900-1154 1186-1448	2	A:900-1154 B:900-1154 -
2	TYR_PHOSPHATASE_2	PS50056	Tyrosine specific protein phosphatases family profile.	PTPRM_HUMAN	1071-1145 1362-1439	2	A:1071-1145 B:1071-1145 -
3	TYR_PHOSPHATASE_1	PS00383	Tyrosine specific protein phosphatases active site.	PTPRM_HUMAN	1093-1103 1387-1397	2	A:1093-1103 B:1093-1103 -

Biological Unit 1 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TYR_PHOSPHATASE_PTP	PS50055	PTP type protein phosphatase family profile.	PTPRM_HUMAN	900-1154 1186-1448	1	A:900-1154 - -
2	TYR_PHOSPHATASE_2	PS50056	Tyrosine specific protein phosphatases family profile.	PTPRM_HUMAN	1071-1145 1362-1439	1	A:1071-1145 - -
3	TYR_PHOSPHATASE_1	PS00383	Tyrosine specific protein phosphatases active site.	PTPRM_HUMAN	1093-1103 1387-1397	1	A:1093-1103 - -

Biological Unit 2 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TYR_PHOSPHATASE_PTP	PS50055	PTP type protein phosphatase family profile.	PTPRM_HUMAN	900-1154 1186-1448	1	- B:900-1154 -
2	TYR_PHOSPHATASE_2	PS50056	Tyrosine specific protein phosphatases family profile.	PTPRM_HUMAN	1071-1145 1362-1439	1	- B:1071-1145 -
3	TYR_PHOSPHATASE_1	PS00383	Tyrosine specific protein phosphatases active site.	PTPRM_HUMAN	1093-1103 1387-1397	1	- B:1093-1103 -

Asymmetric Unit (9, 18)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000332175	1	ENSE00001308921	chr18:7567817-7567889	73	PTPRM_HUMAN	1-25	25	0	-	-
1.3	ENST00000332175	3	ENSE00001688331	chr18:7774147-7774269	123	PTPRM_HUMAN	25-66	42	0	-	-
1.4	ENST00000332175	4	ENSE00001747026	chr18:7888104-7888375	272	PTPRM_HUMAN	66-156	91	0	-	-
1.5	ENST00000332175	5	ENSE00001782251	chr18:7906503-7906581	79	PTPRM_HUMAN	157-183	27	0	-	-
1.6	ENST00000332175	6	ENSE00001612827	chr18:7926566-7926681	116	PTPRM_HUMAN	183-221	39	0	-	-
1.8	ENST00000332175	8	ENSE00001732355	chr18:7949179-7949353	175	PTPRM_HUMAN	222-280	59	0	-	-
1.9	ENST00000332175	9	ENSE00001651616	chr18:7955119-7955412	294	PTPRM_HUMAN	280-378	99	0	-	-
1.10	ENST00000332175	10	ENSE00001638021	chr18:8069684-8069992	309	PTPRM_HUMAN	378-481	104	0	-	-
1.11	ENST00000332175	11	ENSE00001650489	chr18:8076453-8076562	110	PTPRM_HUMAN	481-517	37	0	-	-
1.12	ENST00000332175	12	ENSE00001728904	chr18:8085669-8085870	202	PTPRM_HUMAN	518-585	68	0	-	-
1.13	ENST00000332175	13	ENSE00001800642	chr18:8088747-8088849	103	PTPRM_HUMAN	585-619	35	0	-	-
1.14	ENST00000332175	14	ENSE00001777562	chr18:8113484-8113757	274	PTPRM_HUMAN	619-710	92	0	-	-
1.15	ENST00000332175	15	ENSE00001725303	chr18:8114789-8114825	37	PTPRM_HUMAN	711-723	13	0	-	-
1.16	ENST00000332175	16	ENSE00001751923	chr18:8143645-8143777	133	PTPRM_HUMAN	723-767	45	0	-	-
1.17	ENST00000332175	17	ENSE00001788248	chr18:8244056-8244207	152	PTPRM_HUMAN	767-818	52	0	-	-
1.18	ENST00000332175	18	ENSE00001690528	chr18:8247843-8247917	75	PTPRM_HUMAN	818-843	26	0	-	-
1.21	ENST00000332175	21	ENSE00001735424	chr18:8253225-8253412	188	PTPRM_HUMAN	843-905	63	2	A:879-905 B:879-905	27 27
1.22	ENST00000332175	22	ENSE00001785900	chr18:8296366-8296453	88	PTPRM_HUMAN	906-935	30	2	A:906-935 B:906-935	30 30
1.23	ENST00000332175	23	ENSE00001611771	chr18:8314779-8314855	77	PTPRM_HUMAN	935-960	26	2	A:935-960 B:935-960	26 26
1.24	ENST00000332175	24	ENSE00001645096	chr18:8319176-8319212	37	PTPRM_HUMAN	961-973	13	2	A:961-973 B:961-973	13 13
1.25	ENST00000332175	25	ENSE00001602094	chr18:8343421-8343518	98	PTPRM_HUMAN	973-1005	33	2	A:973-1005 B:973-1005	33 33
1.26	ENST00000332175	26	ENSE00001610861	chr18:8370888-8371004	117	PTPRM_HUMAN	1006-1044	39	2	A:1006-1044 B:1006-1044	39 39
1.27	ENST00000332175	27	ENSE00001783729	chr18:8376044-8376198	155	PTPRM_HUMAN	1045-1096	52	2	A:1045-1096 B:1045-1096	52 52
1.28	ENST00000332175	28	ENSE00001732392	chr18:8376460-8376595	136	PTPRM_HUMAN	1096-1141	46	2	A:1096-1141 B:1096-1141	46 46
1.29	ENST00000332175	29	ENSE00001797057	chr18:8378263-8378412	150	PTPRM_HUMAN	1142-1191	50	2	A:1142-1156 B:1142-1156	15 15
1.30	ENST00000332175	30	ENSE00001188168	chr18:8379165-8379338	174	PTPRM_HUMAN	1192-1249	58	0	-	-
1.31	ENST00000332175	31	ENSE00001143060	chr18:8380294-8380425	132	PTPRM_HUMAN	1250-1293	44	0	-	-
1.32	ENST00000332175	32	ENSE00001143052	chr18:8384559-8384684	126	PTPRM_HUMAN	1294-1335	42	0	-	-
1.33	ENST00000332175	33	ENSE00001143044	chr18:8387070-8387233	164	PTPRM_HUMAN	1336-1390	55	0	-	-
1.34	ENST00000332175	34	ENSE00001148347	chr18:8394474-8394609	136	PTPRM_HUMAN	1390-1435	46	0	-	-
1.35b	ENST00000332175	35b	ENSE00001541394	chr18:8406107-8406859	753	PTPRM_HUMAN	1436-1452	17	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:278
 aligned with PTPRM_HUMAN | P28827 from UniProtKB/Swiss-Prot  Length:1452

    Alignment length:278
                                   888       898       908       918       928       938       948       958       968       978       988       998      1008      1018      1028      1038      1048      1058      1068      1078      1088      1098      1108      1118      1128      1138      1148        
         PTPRM_HUMAN    879 AIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAEYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 1156
               SCOP domains d1rpma_ A: Tyrosine phosphatase                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 1rpmA00 A:879-1156 Protein tyrosine phosphatase superfamily                                                                                                                                                                                                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhh..............hhhhhh.........hhh.................eeee........eeee....hhhhhhhhhhhhh....eeee...................eeee..eeeeeeeeeee..eeeeeeeeee......eeeeeeee............hhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh.......hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---------------------TYR_PHOSPHATASE_PTP  PDB: A:900-1154 UniProt: 900-1154                                                                                                                                                                                                         -- PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYR_PHOSPHATASE_2  PDB: A:1071-1145 UniProt: 1071-1145                     ----------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYR_PHOSPHA----------------------------------------------------- PROSITE (3)
           Transcript 1 (1) Exon 1.21  PDB: A:879-905  Exon 1.22  PDB: A:906-935     -------------------------Exon 1.24    --------------------------------Exon 1.26  PDB: A:1006-1044            Exon 1.27  PDB: A:1045-1096 UniProt: 1045-1096      ---------------------------------------------Exon 1.29       Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------Exon 1.23  PDB: A:935-960 ------------Exon 1.25  PDB: A:973-1005       ------------------------------------------------------------------------------------------Exon 1.28  PDB: A:1096-1141 UniProt: 1096-1141--------------- Transcript 1 (2)
                1rpm A  879 AIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAEYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 1156
                                   888       898       908       918       928       938       948       958       968       978       988       998      1008      1018      1028      1038      1048      1058      1068      1078      1088      1098      1108      1118      1128      1138      1148

Chain B from PDB  Type:PROTEIN  Length:278
 aligned with PTPRM_HUMAN | P28827 from UniProtKB/Swiss-Prot  Length:1452

    Alignment length:278
                                   888       898       908       918       928       938       948       958       968       978       988       998      1008      1018      1028      1038      1048      1058      1068      1078      1088      1098      1108      1118      1128      1138      1148        
         PTPRM_HUMAN    879 AIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAEYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 1156
               SCOP domains d1rpmb_ B: Tyrosine phosphatase                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 1rpmB00 B:879-1156 Protein tyrosine phosphatase superfamily                                                                                                                                                                                                                            CATH domains
           Pfam domains (1) --------------------------------------------Y_phosphatase-1rpmB01 B:923-1153                                                                                                                                                                                                       --- Pfam domains (1)
           Pfam domains (2) --------------------------------------------Y_phosphatase-1rpmB02 B:923-1153                                                                                                                                                                                                       --- Pfam domains (2)
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhh..............hhhhhh.........hhh.................eeee........eeee....hhhhhhhhhhhhh....eeee...................eeee..eeeeeeeeeee..eeeeeeeeee......eeeeeeee............hhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh.......hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---------------------TYR_PHOSPHATASE_PTP  PDB: B:900-1154 UniProt: 900-1154                                                                                                                                                                                                         -- PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYR_PHOSPHATASE_2  PDB: B:1071-1145 UniProt: 1071-1145                     ----------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYR_PHOSPHA----------------------------------------------------- PROSITE (3)
           Transcript 1 (1) Exon 1.21  PDB: B:879-905  Exon 1.22  PDB: B:906-935     -------------------------Exon 1.24    --------------------------------Exon 1.26  PDB: B:1006-1044            Exon 1.27  PDB: B:1045-1096 UniProt: 1045-1096      ---------------------------------------------Exon 1.29       Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------Exon 1.23  PDB: B:935-960 ------------Exon 1.25  PDB: B:973-1005       ------------------------------------------------------------------------------------------Exon 1.28  PDB: B:1096-1141 UniProt: 1096-1141--------------- Transcript 1 (2)
                1rpm B  879 AIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAEYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 1156
                                   888       898       908       918       928       938       948       958       968       978       988       998      1008      1018      1028      1038      1048      1058      1068      1078      1088      1098      1108      1118      1128      1138      1148

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Alpha-Beta Complex (3881)

Topology: Protein-Tyrosine Phosphatase; Chain A (262)

Homologous Superfamily: Protein tyrosine phosphatase superfamily (228)

Human (Homo sapiens) (196)

1a	1rpmA00	A:879-1156
1b	1rpmB00	B:879-1156

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Phosphatase (121)

Family: Y_phosphatase (93)

Homo sapiens (Human) (82)

1a	Y_phosphatase-1rpmB01	B:923-1153
1b	Y_phosphatase-1rpmB02	B:923-1153

Asymmetric Unit(hide GO term definitions)

Chain A,B (PTPRM_HUMAN | P28827)

molecular function
	GO:0045296	cadherin binding	Interacting selectively and non-covalently with cadherin, a type I membrane protein involved in cell adhesion.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0042802	identical protein binding	Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0016791	phosphatase activity	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
	GO:0004721	phosphoprotein phosphatase activity	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004725	protein tyrosine phosphatase activity	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
	GO:0005001	transmembrane receptor protein tyrosine phosphatase activity	Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
biological process
	GO:0007155	cell adhesion	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
	GO:0016311	dephosphorylation	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell.
	GO:0016525	negative regulation of angiogenesis	Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis.
	GO:0010596	negative regulation of endothelial cell migration	Any process that decreases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.
	GO:0001937	negative regulation of endothelial cell proliferation	Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation.
	GO:0031175	neuron projection development	The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
	GO:0035335	peptidyl-tyrosine dephosphorylation	The removal of phosphoric residues from peptidyl-O-phospho-tyrosine to form peptidyl-tyrosine.
	GO:0006470	protein dephosphorylation	The process of removing one or more phosphoric residues from a protein.
	GO:0042493	response to drug	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
	GO:0010842	retina layer formation	The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.
	GO:0031290	retinal ganglion cell axon guidance	The process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.
	GO:0007165	signal transduction	The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
	GO:0005913	cell-cell adherens junction	An adherens junction which connects a cell to another cell.
	GO:0005911	cell-cell junction	A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0005887	integral component of plasma membrane	The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0030027	lamellipodium	A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0048471	perinuclear region of cytoplasm	Cytoplasm situated near, or occurring around, the nucleus.

Asymmetric Unit
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
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Biological Units
	Complete Structure
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	1rpm
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	PTPRM_HUMAN \| P28827
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UniProtKB/Swiss-Prot
	PTPRM_HUMAN \| P28827	:	2c9a 2v5y

(no "Related Entries Specified in the PDB File" available for 1RPM)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (1, 1)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (3, 6)

Exons (9, 18)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (1, 2)

Gene Ontology (29, 29)

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Related Entries Specified in the PDB File