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1RPM
Asym. Unit
Info
Asym.Unit (101 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (50 KB)
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(1)
Title
:
HUMAN RECEPTOR PROTEIN TYROSINE PHOSPHATASE MU, DOMAIN 1
Authors
:
K. M. V. Hoffmann, N. K. Tonks, D. Barford
Date
:
11 Sep 97 (Deposition) - 01 Apr 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Receptor, Phosphatase, Signal Transduction, Adhesion, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. M. Hoffmann, N. K. Tonks, D. Barford
The Crystal Structure Of Domain 1 Of Receptor Protein-Tyrosine Phosphatase Mu.
J. Biol. Chem. V. 272 27505 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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]
Sites
(1, 1)
Info
All Sites
1: ATE (UNKNOWN)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
ATE
UNKNOWN
CYS A:1095
ACTIVE SITE CYSTEINE.
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: TYR_PHOSPHATASE_PTP (A:900-1154,B:900-1154|-)
2: TYR_PHOSPHATASE_2 (A:1071-1145,B:1071-1145|-)
3: TYR_PHOSPHATASE_1 (A:1093-1103,B:1093-1103|-)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TYR_PHOSPHATASE_PTP
PS50055
PTP type protein phosphatase family profile.
PTPRM_HUMAN
900-1154
1186-1448
2
A:900-1154
B:900-1154
-
2
TYR_PHOSPHATASE_2
PS50056
Tyrosine specific protein phosphatases family profile.
PTPRM_HUMAN
1071-1145
1362-1439
2
A:1071-1145
B:1071-1145
-
3
TYR_PHOSPHATASE_1
PS00383
Tyrosine specific protein phosphatases active site.
PTPRM_HUMAN
1093-1103
1387-1397
2
A:1093-1103
B:1093-1103
-
[
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Exons
(9, 18)
Info
All Exons
Exon 1.21 (A:879-905 | B:879-905)
Exon 1.22 (A:906-935 | B:906-935)
Exon 1.23 (A:935-960 | B:935-960)
Exon 1.24 (A:961-973 | B:961-973)
Exon 1.25 (A:973-1005 | B:973-1005)
Exon 1.26 (A:1006-1044 | B:1006-1044)
Exon 1.27 (A:1045-1096 | B:1045-1096)
Exon 1.28 (A:1096-1141 | B:1096-1141)
Exon 1.29 (A:1142-1156 | B:1142-1156)
View:
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All Exon Boundaries
01: Boundary 1.18/1.21
02: Boundary 1.21/1.22
03: Boundary 1.22/1.23
04: Boundary 1.23/1.24
05: Boundary 1.24/1.25
06: Boundary 1.25/1.26
07: Boundary 1.26/1.27
08: Boundary 1.27/1.28
09: Boundary 1.28/1.29
10: Boundary 1.29/1.30
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000332175
1
ENSE00001308921
chr18:
7567817-7567889
73
PTPRM_HUMAN
1-25
25
0
-
-
1.3
ENST00000332175
3
ENSE00001688331
chr18:
7774147-7774269
123
PTPRM_HUMAN
25-66
42
0
-
-
1.4
ENST00000332175
4
ENSE00001747026
chr18:
7888104-7888375
272
PTPRM_HUMAN
66-156
91
0
-
-
1.5
ENST00000332175
5
ENSE00001782251
chr18:
7906503-7906581
79
PTPRM_HUMAN
157-183
27
0
-
-
1.6
ENST00000332175
6
ENSE00001612827
chr18:
7926566-7926681
116
PTPRM_HUMAN
183-221
39
0
-
-
1.8
ENST00000332175
8
ENSE00001732355
chr18:
7949179-7949353
175
PTPRM_HUMAN
222-280
59
0
-
-
1.9
ENST00000332175
9
ENSE00001651616
chr18:
7955119-7955412
294
PTPRM_HUMAN
280-378
99
0
-
-
1.10
ENST00000332175
10
ENSE00001638021
chr18:
8069684-8069992
309
PTPRM_HUMAN
378-481
104
0
-
-
1.11
ENST00000332175
11
ENSE00001650489
chr18:
8076453-8076562
110
PTPRM_HUMAN
481-517
37
0
-
-
1.12
ENST00000332175
12
ENSE00001728904
chr18:
8085669-8085870
202
PTPRM_HUMAN
518-585
68
0
-
-
1.13
ENST00000332175
13
ENSE00001800642
chr18:
8088747-8088849
103
PTPRM_HUMAN
585-619
35
0
-
-
1.14
ENST00000332175
14
ENSE00001777562
chr18:
8113484-8113757
274
PTPRM_HUMAN
619-710
92
0
-
-
1.15
ENST00000332175
15
ENSE00001725303
chr18:
8114789-8114825
37
PTPRM_HUMAN
711-723
13
0
-
-
1.16
ENST00000332175
16
ENSE00001751923
chr18:
8143645-8143777
133
PTPRM_HUMAN
723-767
45
0
-
-
1.17
ENST00000332175
17
ENSE00001788248
chr18:
8244056-8244207
152
PTPRM_HUMAN
767-818
52
0
-
-
1.18
ENST00000332175
18
ENSE00001690528
chr18:
8247843-8247917
75
PTPRM_HUMAN
818-843
26
0
-
-
1.21
ENST00000332175
21
ENSE00001735424
chr18:
8253225-8253412
188
PTPRM_HUMAN
843-905
63
2
A:879-905
B:879-905
27
27
1.22
ENST00000332175
22
ENSE00001785900
chr18:
8296366-8296453
88
PTPRM_HUMAN
906-935
30
2
A:906-935
B:906-935
30
30
1.23
ENST00000332175
23
ENSE00001611771
chr18:
8314779-8314855
77
PTPRM_HUMAN
935-960
26
2
A:935-960
B:935-960
26
26
1.24
ENST00000332175
24
ENSE00001645096
chr18:
8319176-8319212
37
PTPRM_HUMAN
961-973
13
2
A:961-973
B:961-973
13
13
1.25
ENST00000332175
25
ENSE00001602094
chr18:
8343421-8343518
98
PTPRM_HUMAN
973-1005
33
2
A:973-1005
B:973-1005
33
33
1.26
ENST00000332175
26
ENSE00001610861
chr18:
8370888-8371004
117
PTPRM_HUMAN
1006-1044
39
2
A:1006-1044
B:1006-1044
39
39
1.27
ENST00000332175
27
ENSE00001783729
chr18:
8376044-8376198
155
PTPRM_HUMAN
1045-1096
52
2
A:1045-1096
B:1045-1096
52
52
1.28
ENST00000332175
28
ENSE00001732392
chr18:
8376460-8376595
136
PTPRM_HUMAN
1096-1141
46
2
A:1096-1141
B:1096-1141
46
46
1.29
ENST00000332175
29
ENSE00001797057
chr18:
8378263-8378412
150
PTPRM_HUMAN
1142-1191
50
2
A:1142-1156
B:1142-1156
15
15
1.30
ENST00000332175
30
ENSE00001188168
chr18:
8379165-8379338
174
PTPRM_HUMAN
1192-1249
58
0
-
-
1.31
ENST00000332175
31
ENSE00001143060
chr18:
8380294-8380425
132
PTPRM_HUMAN
1250-1293
44
0
-
-
1.32
ENST00000332175
32
ENSE00001143052
chr18:
8384559-8384684
126
PTPRM_HUMAN
1294-1335
42
0
-
-
1.33
ENST00000332175
33
ENSE00001143044
chr18:
8387070-8387233
164
PTPRM_HUMAN
1336-1390
55
0
-
-
1.34
ENST00000332175
34
ENSE00001148347
chr18:
8394474-8394609
136
PTPRM_HUMAN
1390-1435
46
0
-
-
1.35b
ENST00000332175
35b
ENSE00001541394
chr18:
8406107-8406859
753
PTPRM_HUMAN
1436-1452
17
0
-
-
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1rpma_ (A:)
1b: SCOP_d1rpmb_ (B:)
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Protein Domains
(
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
(Phosphotyrosine protein) phosphatases II
(296)
Superfamily
:
(Phosphotyrosine protein) phosphatases II
(296)
Family
:
Higher-molecular-weight phosphotyrosine protein phosphatases
(166)
Protein domain
:
Tyrosine phosphatase
(120)
Human (Homo sapiens), mu [TaxId: 9606]
(1)
1a
d1rpma_
A:
1b
d1rpmb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1rpmA00 (A:879-1156)
1b: CATH_1rpmB00 (B:879-1156)
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Organisms
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)
(
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Protein-Tyrosine Phosphatase; Chain A
(262)
Homologous Superfamily
:
Protein tyrosine phosphatase superfamily
(228)
Human (Homo sapiens)
(196)
1a
1rpmA00
A:879-1156
1b
1rpmB00
B:879-1156
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Y_phosphatase_1rpmB01 (B:923-1153)
1b: PFAM_Y_phosphatase_1rpmB02 (B:923-1153)
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(
)
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(
)
(
)
Clan
:
Phosphatase
(121)
Family
:
Y_phosphatase
(93)
Homo sapiens (Human)
(82)
1a
Y_phosphatase-1rpmB01
B:923-1153
1b
Y_phosphatase-1rpmB02
B:923-1153
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