Chain A from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d1q5ra_ A: Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 1q5rA00 A:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeeee........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....ee....eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------.....eeeeeee.......eee..hhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: A:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r A 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain B from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d1q5rb_ B: Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 1q5rB00 B:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeeee........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....ee....eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------.....eeeeeee.......eee..hhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: B:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r B 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain C from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d1q5rc_ C: Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 1q5rC00 C:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeeee........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....ee....eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------.....eeeeeee.......eee..hhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: C:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r C 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain D from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d1q5rd_ D: Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 1q5rD00 D:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeeee........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....ee....eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------.....eeeeeee.......eee..hhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: D:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r D 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain E from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d1q5re_ E: Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 1q5rE00 E:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeeee........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....ee....eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------.....eeeeeee.......eee..hhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: E:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r E 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain F from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d1q5rf_ F: Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 1q5rF00 F:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeeee........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....ee....eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------.....eeeeeee.......eee..hhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: F:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r F 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain G from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d1q5rg_ G: Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 1q5rG00 G:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains (1) ---------------Proteasome-1q5rG01 G:24-209 -------------------------- Pfam domains (1)
Pfam domains (2) ---------------Proteasome-1q5rG02 G:24-209 -------------------------- Pfam domains (2)
Pfam domains (3) ---------------Proteasome-1q5rG03 G:24-209 -------------------------- Pfam domains (3)
Pfam domains (4) ---------------Proteasome-1q5rG04 G:24-209 -------------------------- Pfam domains (4)
Pfam domains (5) ---------------Proteasome-1q5rG05 G:24-209 -------------------------- Pfam domains (5)
Pfam domains (6) ---------------Proteasome-1q5rG06 G:24-209 -------------------------- Pfam domains (6)
Pfam domains (7) ---------------Proteasome-1q5rG07 G:24-209 -------------------------- Pfam domains (7)
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeeee........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....ee....eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------.....eeeeeee.......eee..hhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: G:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r G 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain H from PDB Type:PROTEIN Length:251
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
PSB1_RHOER 17 LSFGSNLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains d1q5rh_ H: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 1q5rH00 H:-49-219 Glutamin e Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhh....-----------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..............eeeeee..eeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------PROTEASOME_BETA_2 PDB: H:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r H -49 LSFGSNLSSFTDYLRGHAPELLPENR-----------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-40 -30 | - - | |1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
-24 -6 -1|
1
Chain I from PDB Type:PROTEIN Length:251
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
PSB1_RHOER 17 LSFGSNLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains d1q5ri_ I: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 1q5rI00 I:-49-219 Glutamin e Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhh....-----------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..............eeeeee..eeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------PROTEASOME_BETA_2 PDB: I:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r I -49 LSFGSNLSSFTDYLRGHAPELLPENR-----------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-40 -30 | - - | |1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
-24 -6 -1|
1
Chain J from PDB Type:PROTEIN Length:251
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
PSB1_RHOER 17 LSFGSNLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains d1q5rj_ J: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 1q5rJ00 J:-49-219 Glutamin e Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhh....-----------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..............eeeeee..eeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------PROTEASOME_BETA_2 PDB: J:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r J -49 LSFGSNLSSFTDYLRGHAPELLPENR-----------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-40 -30 | - - | |1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
-24 -6 -1|
1
Chain K from PDB Type:PROTEIN Length:251
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
PSB1_RHOER 17 LSFGSNLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains d1q5rk_ K: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 1q5rK00 K:-49-219 Glutamin e Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhh....-----------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..............eeeeee..eeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------PROTEASOME_BETA_2 PDB: K:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r K -49 LSFGSNLSSFTDYLRGHAPELLPENR-----------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-40 -30 | - - | |1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
-24 -6 -1|
1
Chain L from PDB Type:PROTEIN Length:251
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
PSB1_RHOER 17 LSFGSNLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains d1q5rl_ L: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 1q5rL00 L:-49-219 Glutamin e Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhh....-----------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..............eeeeee..eeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------PROTEASOME_BETA_2 PDB: L:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r L -49 LSFGSNLSSFTDYLRGHAPELLPENR-----------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-40 -30 | - - | |1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
-24 -6 -1|
1
Chain M from PDB Type:PROTEIN Length:251
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
PSB1_RHOER 17 LSFGSNLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains d1q5rm_ M: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 1q5rM00 M:-49-219 Glutamin e Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhh....-----------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..............eeeeee..eeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------PROTEASOME_BETA_2 PDB: M:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r M -49 LSFGSNLSSFTDYLRGHAPELLPENR-----------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-40 -30 | - - | |1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
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1
Chain N from PDB Type:PROTEIN Length:251
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
PSB1_RHOER 17 LSFGSNLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains d1q5rn_ N: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 1q5rN00 N:-49-219 Glutamin e Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains (1) ---------------------------------------------Proteasome-1q5rN01 N:-4-185 ---------------------------------- Pfam domains (1)
Pfam domains (2) ---------------------------------------------Proteasome-1q5rN02 N:-4-185 ---------------------------------- Pfam domains (2)
Pfam domains (3) ---------------------------------------------Proteasome-1q5rN03 N:-4-185 ---------------------------------- Pfam domains (3)
Pfam domains (4) ---------------------------------------------Proteasome-1q5rN04 N:-4-185 ---------------------------------- Pfam domains (4)
Pfam domains (5) ---------------------------------------------Proteasome-1q5rN05 N:-4-185 ---------------------------------- Pfam domains (5)
Pfam domains (6) ---------------------------------------------Proteasome-1q5rN06 N:-4-185 ---------------------------------- Pfam domains (6)
Pfam domains (7) ---------------------------------------------Proteasome-1q5rN07 N:-4-185 ---------------------------------- Pfam domains (7)
Sec.struct. author ........hhhhhhhhhhhhhh....-----------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..............eeeeee..eeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------PROTEASOME_BETA_2 PDB: N:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1q5r N -49 LSFGSNLSSFTDYLRGHAPELLPENR-----------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-40 -30 | - - | |1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |