Chain A from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d2h6ja1 A:9-235 Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 2h6jA00 A:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeee.........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee...eeeee..eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------......eeeeee...............hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: A:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j A 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain B from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d2h6jb1 B:9-235 Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 2h6jB00 B:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeee.........eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee...eeeee..eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------......eeeeee...............hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: B:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j B 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain C from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d2h6jc1 C:9-235 Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 2h6jC00 C:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeee.........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....eeee..eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------......eeeeee...............hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: C:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j C 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain D from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d2h6jd1 D:9-235 Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 2h6jD00 D:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh..eeeeee...eeeeee.........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....eeee..eeeee.hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------......eeeeee...............hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: D:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j D 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain E from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d2h6je1 E:9-235 Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 2h6jE00 E:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeee.........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee...eeeee..eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------......eeeeee...............hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: E:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j E 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain F from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d2h6jf1 F:9-235 Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 2h6jF00 F:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeee.........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee...eeeee..eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------......eeeeee...............hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: F:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j F 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain G from PDB Type:PROTEIN Length:219
aligned with PSA1_RHOER | Q53080 from UniProtKB/Swiss-Prot Length:259
Alignment length:227
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
PSA1_RHOER 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
SCOP domains d2h6jg1 G:9-235 Proteasome alpha subunit (non-catalytic) SCOP domains
CATH domains 2h6jG00 G:9-235 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhh...eeeee...eeeeee.........eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..........eeeeee....eeee..eeee..hhhhhhhhhhh......hhhhhhhhhhhhhhh..--------......eeeeee...............hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------PROTEASOME_ALPHA_2 PDB: G:16-232 UniProt: 16-232 --- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j G 9 AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGG--------VDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE 235
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 | - | 208 218 228
192 201
Chain H from PDB Type:PROTEIN Length:242
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:263
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
PSB1_RHOER 22 NLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains --------------------------------------d2h6jh1 H:-6-219 Proteasome beta subunit (catalytic) SCOP domains
CATH domains 2h6jH00 H:-44-219 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhh---------------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...............eeeeee..eeee..hhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------PROTEASOME_BETA_2 PDB: H:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j H -44 NLSSFTDYLRGHAPELL---------------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLAAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-35 | - - -5 || 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216
-28 -6 -1|
1
Chain I from PDB Type:PROTEIN Length:242
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:263
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
PSB1_RHOER 22 NLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains --------------------------------------d2h6ji1 I:-6-219 Proteasome beta subunit (catalytic) SCOP domains
CATH domains 2h6jI00 I:-44-219 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhh---------------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh...............eeeeee..eee...hhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------PROTEASOME_BETA_2 PDB: I:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j I -44 NLSSFTDYLRGHAPELL---------------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLAAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-35 | - - -5 || 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216
-28 -6 -1|
1
Chain J from PDB Type:PROTEIN Length:242
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:263
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
PSB1_RHOER 22 NLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains --------------------------------------d2h6jj1 J:-6-219 Proteasome beta subunit (catalytic) SCOP domains
CATH domains 2h6jJ00 J:-44-219 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhh---------------------........eeeee....eeeee...ee....eee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...............eeeeee..eee..hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------PROTEASOME_BETA_2 PDB: J:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j J -44 NLSSFTDYLRGHAPELL---------------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLAAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-35 | - - -5 || 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216
-28 -6 -1|
1
Chain K from PDB Type:PROTEIN Length:242
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:263
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
PSB1_RHOER 22 NLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains --------------------------------------d2h6jk1 K:-6-219 Proteasome beta subunit (catalytic) SCOP domains
CATH domains 2h6jK00 K:-44-219 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhh....---------------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh...............eeeeee..eee..hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------PROTEASOME_BETA_2 PDB: K:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j K -44 NLSSFTDYLRGHAPELL---------------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLAAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-35 | - - -5 || 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216
-28 -6 -1|
1
Chain L from PDB Type:PROTEIN Length:242
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:263
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
PSB1_RHOER 22 NLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains --------------------------------------d2h6jl1 L:-6-219 Proteasome beta subunit (catalytic) SCOP domains
CATH domains 2h6jL00 L:-44-219 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhh....---------------------........eeeee....eeeee...ee....eee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh...............eeeeee..eee..hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------PROTEASOME_BETA_2 PDB: L:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j L -44 NLSSFTDYLRGHAPELL---------------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLAAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-35 | - - -5 || 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216
-28 -6 -1|
1
Chain M from PDB Type:PROTEIN Length:242
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:263
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
PSB1_RHOER 22 NLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains --------------------------------------d2h6jm1 M:-6-219 Proteasome beta subunit (catalytic) SCOP domains
CATH domains 2h6jM00 M:-44-219 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhh---------------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...............eeeeee..eee..hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------PROTEASOME_BETA_2 PDB: M:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j M -44 NLSSFTDYLRGHAPELL---------------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLAAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-35 | - - -5 || 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216
-28 -6 -1|
1
Chain N from PDB Type:PROTEIN Length:242
aligned with PSB1_RHOER | Q53079 from UniProtKB/Swiss-Prot Length:294
Alignment length:263
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
PSB1_RHOER 22 NLSSFTDYLRGHAPELLPENRIGHRSHSTRGGDGMESGDLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 284
SCOP domains --------------------------------------d2h6jn1 N:-6-219 Proteasome beta subunit (catalytic) SCOP domains
CATH domains 2h6jN00 N:-44-219 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhh---------------------........eeeee....eeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh....eeeeeeee..........eeeeee.....eee....eeee..hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...............eeeeee..eeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------PROTEASOME_BETA_2 PDB: N:-1-190 UniProt: 65-255 ----------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2h6j N -44 NLSSFTDYLRGHAPELL---------------------DLAPHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLAAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSELARRIVA 219
-35 | - - -5 || 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216
-28 -6 -1|
1
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |