1O6T - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Title :   INTERNALIN (INLA,LISTERIA MONOCYTOGENES) - FUNCTIONAL DOMAIN, UNCOMPLEXED

Authors :   W. -D. Schubert, C. Urbanke, T. Ziehm, V. Beier, M. P. Machner, E. Domann J. Wehland, T. Chakraborty, D. W. Heinz

Date :   15 Oct 02 (Deposition) - 23 Dec 02 (Release) - 26 Jan 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.60

Chains :   Asym. Unit : A
Biol. Unit 1: A  (2x)

Keywords :   Cell Invasion, Bacterial Infection, Leucine Rich Repeat, Cell Adhesion, Cell-Wall Surface Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   W. -D. Schubert, C. Urbanke, T. Ziehm, V. Beier, M. P. Machner, E. Domann, J. Wehland, T. Chakraborty, D. W. Heinz
Structure Of Internalin, A Major Invasion Protein Of Listeria Monocytogenes, In Complex With Its Human Receptor E-Cadherin
Cell(Cambridge, Mass. ) V. 111 825 2002
PubMed-ID: 12526809 | Reference-DOI: 10.1016/S0092-8674(02)01136-4

Molecule 1 - INTERNALIN A
	Atcc	:	DSMZ 20600
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PGEX-6P-1
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Expression System Vector Type	:	PLASMID
	Fragment	:	FUNCTIONAL DOMAIN, RESIDUES 36-496
	Organism Scientific	:	LISTERIA MONOCYTOGENES
	Organism Taxid	:	169963
	Strain	:	EGD-E
	Variant	:	SEROVAR 1/2A

		1
Asymmetric Unit	:	A
Biological Unit 1 (2x)	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 13)

No.	Name	Count	Type	Full Name
1	CA	1	Ligand/Ion	CALCIUM ION
2	CL	2	Ligand/Ion	CHLORIDE ION
3	MES	5	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4	MG	1	Ligand/Ion	MAGNESIUM ION
5	SO4	4	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 18)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	MES	10	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4	MG	-1	Ligand/Ion	MAGNESIUM ION
5	SO4	8	Ligand/Ion	SULFATE ION

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:277 , HOH A:2126 , HOH A:2371 , HOH A:2403 , HOH A:2406 , HOH A:2407	BINDING SITE FOR RESIDUE MG A1497
02	AC2	SOFTWARE	LYS A:301 , HOH A:2050 , HOH A:2467 , HOH A:2468	BINDING SITE FOR RESIDUE CA A1498
03	AC3	SOFTWARE	ASN A:309 , HOH A:2444	BINDING SITE FOR RESIDUE CL A1499
04	AC4	SOFTWARE	LYS A:56 , GLN A:82 , HOH A:2687	BINDING SITE FOR RESIDUE CL A1500
05	AC5	SOFTWARE	TYR A:343 , THR A:345 , TYR A:347 , PHE A:367 , TYR A:369 , MES A:1508 , HOH A:2493	BINDING SITE FOR RESIDUE SO4 A1501
06	AC6	SOFTWARE	ARG A:365 , ASN A:386 , TRP A:387 , THR A:408 , HOH A:2540 , HOH A:2542 , HOH A:2683	BINDING SITE FOR RESIDUE SO4 A1502
07	AC7	SOFTWARE	ARG A:85 , ASN A:129 , HOH A:2106 , HOH A:2166 , HOH A:2684 , HOH A:2685	BINDING SITE FOR RESIDUE SO4 A1503
08	AC8	SOFTWARE	LYS A:56 , LEU A:81 , GLN A:82 , HOH A:2687	BINDING SITE FOR RESIDUE SO4 A1504
09	AC9	SOFTWARE	ASN A:413 , THR A:484 , THR A:485 , HOH A:2241 , HOH A:2566 , HOH A:2668 , HOH A:2688 , HOH A:2689 , HOH A:2701 , HOH A:2702 , HOH A:2703 , HOH A:2704	BINDING SITE FOR RESIDUE MES A1505
10	BC1	SOFTWARE	GLY A:62 , ASN A:321 , TYR A:343 , TYR A:347 , ARG A:365 , PHE A:367 , TYR A:369 , TRP A:387 , MES A:1508 , HOH A:2467 , HOH A:2690	BINDING SITE FOR RESIDUE MES A1506
11	BC2	SOFTWARE	LYS A:63 , GLU A:326 , PHE A:348 , HOH A:2691 , HOH A:2693	BINDING SITE FOR RESIDUE MES A1507
12	BC3	SOFTWARE	GLY A:62 , TYR A:369 , SER A:389 , GLY A:391 , HIS A:392 , ASN A:413 , SO4 A:1501 , MES A:1506 , HOH A:2518 , HOH A:2694 , HOH A:2700 , HOH A:2702	BINDING SITE FOR RESIDUE MES A1508
13	BC4	SOFTWARE	ASP A:76 , GLN A:77 , THR A:79 , ASN A:99 , LYS A:121 , HOH A:2695 , HOH A:2696 , HOH A:2697 , HOH A:2698	BINDING SITE FOR RESIDUE MES A1509

(no "SS Bond" information available for 1O6T)

Asymmetric Unit

No.	Residues
1	Gly A:194	-	Asn A:195
2	Glu A:455	-	Pro A:456

Asymmetric Unit (15, 15)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_INLA_LISMO_003 *	T	51	A	INLA_LISMO	---	---	A	T	51	A
02	UniProt	VAR_INLA_LISMO_004 *	V	94	L	INLA_LISMO	---	---	A	V	94	L
03	UniProt	VAR_INLA_LISMO_005 *	N	118	D	INLA_LISMO	---	---	A	N	118	D
04	UniProt	VAR_INLA_LISMO_006 *	T	142	S	INLA_LISMO	---	---	A	T	142	S
05	UniProt	VAR_INLA_LISMO_007 *	S	187	N	INLA_LISMO	---	---	A	S	187	N
06	UniProt	VAR_INLA_LISMO_008 *	F	193	L	INLA_LISMO	---	---	A	F	193	L
07	UniProt	VAR_INLA_LISMO_009 *	L	253	W	INLA_LISMO	---	---	A	L	253	W
08	UniProt	VAR_INLA_LISMO_010 *	S	292	P	INLA_LISMO	---	---	A	S	292	P
09	UniProt	VAR_INLA_LISMO_011 *	S	292	R	INLA_LISMO	---	---	A	S	292	R
10	UniProt	VAR_INLA_LISMO_012 *	N	321	S	INLA_LISMO	---	---	A	N	321	S
11	UniProt	VAR_INLA_LISMO_013 *	N	381	S	INLA_LISMO	---	---	A	N	381	S
12	UniProt	VAR_INLA_LISMO_014 *	A	416	E	INLA_LISMO	---	---	A	A	416	E
13	UniProt	VAR_INLA_LISMO_015 *	T	454	A	INLA_LISMO	---	---	A	T	454	A
14	UniProt	VAR_INLA_LISMO_016 *	S	474	N	INLA_LISMO	---	---	A	S	474	N
15	UniProt	VAR_INLA_LISMO_017 *	P	476	S	INLA_LISMO	---	---	A	P	476	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (15, 30)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_INLA_LISMO_003 *	T	51	A	INLA_LISMO	---	---	A	T	51	A
02	UniProt	VAR_INLA_LISMO_004 *	V	94	L	INLA_LISMO	---	---	A	V	94	L
03	UniProt	VAR_INLA_LISMO_005 *	N	118	D	INLA_LISMO	---	---	A	N	118	D
04	UniProt	VAR_INLA_LISMO_006 *	T	142	S	INLA_LISMO	---	---	A	T	142	S
05	UniProt	VAR_INLA_LISMO_007 *	S	187	N	INLA_LISMO	---	---	A	S	187	N
06	UniProt	VAR_INLA_LISMO_008 *	F	193	L	INLA_LISMO	---	---	A	F	193	L
07	UniProt	VAR_INLA_LISMO_009 *	L	253	W	INLA_LISMO	---	---	A	L	253	W
08	UniProt	VAR_INLA_LISMO_010 *	S	292	P	INLA_LISMO	---	---	A	S	292	P
09	UniProt	VAR_INLA_LISMO_011 *	S	292	R	INLA_LISMO	---	---	A	S	292	R
10	UniProt	VAR_INLA_LISMO_012 *	N	321	S	INLA_LISMO	---	---	A	N	321	S
11	UniProt	VAR_INLA_LISMO_013 *	N	381	S	INLA_LISMO	---	---	A	N	381	S
12	UniProt	VAR_INLA_LISMO_014 *	A	416	E	INLA_LISMO	---	---	A	A	416	E
13	UniProt	VAR_INLA_LISMO_015 *	T	454	A	INLA_LISMO	---	---	A	T	454	A
14	UniProt	VAR_INLA_LISMO_016 *	S	474	N	INLA_LISMO	---	---	A	S	474	N
15	UniProt	VAR_INLA_LISMO_017 *	P	476	S	INLA_LISMO	---	---	A	P	476	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (1, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LRR	PS51450	Leucine-rich repeat profile.	INLA_LISM4	99-120 77-98 121-142 143-164 165-186 187-207 208-229 230-251 252-273 274-295 296-317 318-339 340-361 362-383 384-405	15	A:99-120 A:77-98 A:121-142 A:143-164 A:165-186 A:188-207 A:208-229 A:230-251 A:252-273 A:274-295 A:296-317 A:318-339 A:340-361 A:362-383 A:384-405
1	LRR	PS51450	Leucine-rich repeat profile.	INLA_LISMO	99-120 121-142 143-164 165-186 187-207 208-229 230-251 252-273 274-295 296-317 318-339 340-361 362-383 384-405	14	A:99-120 A:121-142 A:143-164 A:165-186 A:187-207 A:208-229 A:230-251 A:252-273 A:274-295 A:296-317 A:318-339 A:340-361 A:362-383 A:384-405

Biological Unit 1 (1, 58)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LRR	PS51450	Leucine-rich repeat profile.	INLA_LISM4	99-120 77-98 121-142 143-164 165-186 187-207 208-229 230-251 252-273 274-295 296-317 318-339 340-361 362-383 384-405	30	A:99-120 A:77-98 A:121-142 A:143-164 A:165-186 A:188-207 A:208-229 A:230-251 A:252-273 A:274-295 A:296-317 A:318-339 A:340-361 A:362-383 A:384-405
1	LRR	PS51450	Leucine-rich repeat profile.	INLA_LISMO	99-120 121-142 143-164 165-186 187-207 208-229 230-251 252-273 274-295 296-317 318-339 340-361 362-383 384-405	28	A:99-120 A:121-142 A:143-164 A:165-186 A:187-207 A:208-229 A:230-251 A:252-273 A:274-295 A:296-317 A:318-339 A:340-361 A:362-383 A:384-405

(no "Exon" information available for 1O6T)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:462
 aligned with INLA_LISM4 | G2K3G6 from UniProtKB/Swiss-Prot  Length:800

    Alignment length:462
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494  
           INLA_LISM4    35 AATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKA 496
               SCOP domains d1o6ta2 A:35-416 Internalin A                                                                                                                                                                                                                                                                                                                                                                 d1o6ta1 A:417-496 Internalin A                                                   SCOP domains
               CATH domains 1o6tA01 A:35-414 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                                                                                     1o6tA02 A:415-496  [code=2.60.40.1220, no name defined]                            CATH domains
           Pfam domains (1) -Internalin_N-1o6tA12    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA01 A:360-403                     -----------------------------------LRR_adjacent-1o6tA13 A:439-496                             Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA02 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA03 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA04 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA05 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA06 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (6)
           Pfam domains (7) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA07 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (7)
           Pfam domains (8) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA08 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (8)
           Pfam domains (9) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA09 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (9)
          Pfam domains (10) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA10 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (10)
          Pfam domains (11) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA11 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (11)
         Sec.struct. author .......eehhhhh.hhhhhhhhhhhh.......eehhhhhh...eee..........hhhhh....eee........hhhhh......eee........hhhhh......eee........hhhhh......eeeeeeeee..hhhhh......eeeeee....hhhhh......eee........hhhhhhh....eee........hhhhhhh....eee........hhhhhhh....eee........hhhhh......eee........hhhhh......eee........hhhhhhh....eee........hhhhhhh....eee........hhhhhhh....eee........hhhhh......eee...eeee........eeeee..............ee.hhheee..eeeee......eeeeeeeeeeee..eeeeeeeeeeee... Sec.struct. author
             SAPs(SNPs) (1) ----------------A------------------------------------------L-----------------------D-----------------------S--------------------------------------------N-----L-----------------------------------------------------------W--------------------------------------P----------------------------S-----------------------------------------------------------S----------------------------------E-------------------------------------A-------------------N-S-------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) (2)
                    PROSITE ------------------------------------------LRR  PDB: A:77-98     LRR  PDB: A:99-120    LRR  PDB: A:121-142   LRR  PDB: A:143-164   LRR  PDB: A:165-186   LRR  PDB: A:188-207  LRR  PDB: A:208-229   LRR  PDB: A:230-251   LRR  PDB: A:252-273   LRR  PDB: A:274-295   LRR  PDB: A:296-317   LRR  PDB: A:318-339   LRR  PDB: A:340-361   LRR  PDB: A:362-383   LRR  PDB: A:384-405   ------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1o6t A  35 SATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKA 496
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494

Chain A from PDB  Type:PROTEIN  Length:462
 aligned with INLA_LISMO | P0DJM0 from UniProtKB/Swiss-Prot  Length:800

    Alignment length:462
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494  
           INLA_LISMO    35 AATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKA 496
               SCOP domains d1o6ta2 A:35-416 Internalin A                                                                                                                                                                                                                                                                                                                                                                 d1o6ta1 A:417-496 Internalin A                                                   SCOP domains
               CATH domains 1o6tA01 A:35-414 Ribonuclease Inhibitor                                                                                                                                                                                                                                                                                                                                                     1o6tA02 A:415-496  [code=2.60.40.1220, no name defined]                            CATH domains
           Pfam domains (1) -Internalin_N-1o6tA12    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA01 A:360-403                     -----------------------------------LRR_adjacent-1o6tA13 A:439-496                             Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA02 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA03 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA04 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA05 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA06 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (6)
           Pfam domains (7) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA07 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (7)
           Pfam domains (8) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA08 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (8)
           Pfam domains (9) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA09 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (9)
          Pfam domains (10) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA10 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (10)
          Pfam domains (11) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR_4-1o6tA11 A:360-403                     --------------------------------------------------------------------------------------------- Pfam domains (11)
         Sec.struct. author .......eehhhhh.hhhhhhhhhhhh.......eehhhhhh...eee..........hhhhh....eee........hhhhh......eee........hhhhh......eee........hhhhh......eeeeeeeee..hhhhh......eeeeee....hhhhh......eee........hhhhhhh....eee........hhhhhhh....eee........hhhhhhh....eee........hhhhh......eee........hhhhh......eee........hhhhhhh....eee........hhhhhhh....eee........hhhhhhh....eee........hhhhh......eee...eeee........eeeee..............ee.hhheee..eeeee......eeeeeeeeeeee..eeeeeeeeeeee... Sec.struct. author
             SAPs(SNPs) (1) ----------------A------------------------------------------L-----------------------D-----------------------S--------------------------------------------N-----L-----------------------------------------------------------W--------------------------------------P----------------------------S-----------------------------------------------------------S----------------------------------E-------------------------------------A-------------------N-S-------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) (2)
                PROSITE (2) ----------------------------------------------------------------LRR  PDB: A:99-120    LRR  PDB: A:121-142   LRR  PDB: A:143-164   LRR  PDB: A:165-186   LRR  PDB: A:187-207  LRR  PDB: A:208-229   LRR  PDB: A:230-251   LRR  PDB: A:252-273   LRR  PDB: A:274-295   LRR  PDB: A:296-317   LRR  PDB: A:318-339   LRR  PDB: A:340-361   LRR  PDB: A:362-383   LRR  PDB: A:384-405   ------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1o6t A  35 SATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKA 496
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: LRR (77)

Family: LRR_4 (28)

Listeria monocytogenes (18)

1a	LRR_4-1o6tA01	A:360-403
1b	LRR_4-1o6tA02	A:360-403
1c	LRR_4-1o6tA03	A:360-403
1d	LRR_4-1o6tA04	A:360-403
1e	LRR_4-1o6tA05	A:360-403
1f	LRR_4-1o6tA06	A:360-403
1g	LRR_4-1o6tA07	A:360-403
1h	LRR_4-1o6tA08	A:360-403
1i	LRR_4-1o6tA09	A:360-403
1j	LRR_4-1o6tA10	A:360-403
1k	LRR_4-1o6tA11	A:360-403

Clan: no clan defined [family: Internalin_N] (18)

Family: Internalin_N (18)

Listeria monocytogenes (18)

Internalin_N-1o6tA12

A:36-59

Clan: no clan defined [family: LRR_adjacent] (15)

Family: LRR_adjacent (15)

Listeria monocytogenes (15)

LRR_adjacent-1o6tA13

A:439-496

Asymmetric Unit(hide GO term definitions)

Chain A (INLA_LISMO | P0DJM0)

cellular component
	GO:0005618		cell wall		The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
	GO:0005576		extracellular region		The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain A (INLA_LISM4 | G2K3G6)

cellular component
	GO:0005618		cell wall		The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
	GO:0005576		extracellular region		The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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	1o6t
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	INLA_LISMO \| P0DJM0
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1o6s	INTERNALIN (LISTERIA MONOCYTOGENES) / E-CADHERIN (HUMAN) RECOGNITION COMPLEX
1o6v	INTERNALIN (LISTERIA MONOCYTOGENES) - FUNCTIONAL DOMAIN, UNCOMPLEXED

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 13)

Sites (13, 13)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (15, 15)

PROSITE Motifs (1, 16)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (2, 2)

CATH Domains (2, 2)

Pfam Domains (3, 13)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File