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(-) Description

Title :  STRUCTURAL GENOMICS, YBGI PROTEIN, UNKNOWN FUNCTION
 
Authors :  J. E. Ladner, G. Obmolova, A. Teplyakov, P. P. Khil, R. D. Camerini-Oter G. L. Gilliland, Structure 2 Function Project (S2F)
Date :  10 Jan 03  (Deposition) - 20 Jan 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C,D,E,F  (1x)
Biol. Unit 2:  E,F  (3x)
Biol. Unit 3:  A,B  (3x)
Biol. Unit 4:  C,D  (3x)
Keywords :  Ybgi, Hypothetical Protein, Toroidal Structure, Structure 2 Function Project, S2F, Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. E. Ladner, G. Obmolova, A. Teplyakov, A. J. Howard, P. P. Khil, R. D. Camerini-Otero, G. L. Gilliland
Crystal Structure Of Escherichia Coli Protein Ybgi, A Toroidal Structure With A Dinuclear Metal Site
Bmc Struct. Biol. V. 3 7 2003
PubMed-ID: 14519207  |  Reference-DOI: 10.1186/1472-6807-3-7

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN YBGI
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PDEST14
    Expression System Strain: BL21 STAR (DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: YBGI OR B0710 OR Z0861 OR ECS0735
    Organism Common: ,
    Organism Scientific: ESCHERICHIA COLI, ESCHERICHIA COLI O157:H7
    Organism Taxid: 562,83334

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): ABCDEF
Biological Unit 2 (3x):     EF
Biological Unit 3 (3x): AB    
Biological Unit 4 (3x):   CD  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 11)

Asymmetric Unit (1, 11)
No.NameCountTypeFull Name
1MG11Ligand/IonMAGNESIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:63 , HIS A:64 , HIS A:215 , GLU A:219 , MG A:302 , HOH A:367BINDING SITE FOR RESIDUE MG A 301
02AC2SOFTWAREHIS A:63 , ASP A:101 , GLU A:219 , MG A:301BINDING SITE FOR RESIDUE MG A 302
03AC3SOFTWAREHIS B:63 , ASP B:101 , GLU B:219 , HOH B:380BINDING SITE FOR RESIDUE MG B 302
04AC4SOFTWAREHIS C:64 , HIS C:215 , GLU C:219 , MG C:302BINDING SITE FOR RESIDUE MG C 301
05AC5SOFTWAREHIS C:63 , ASP C:101 , GLU C:219 , MG C:301 , HOH C:356BINDING SITE FOR RESIDUE MG C 302
06AC6SOFTWAREHIS D:63 , HIS D:64 , HIS D:215 , GLU D:219 , MG D:302BINDING SITE FOR RESIDUE MG D 301
07AC7SOFTWAREHIS D:63 , ASP D:101 , GLU D:219 , MG D:301 , HOH D:338BINDING SITE FOR RESIDUE MG D 302
08AC8SOFTWAREHIS E:63 , HIS E:64 , HIS E:215 , GLU E:219 , MG E:302BINDING SITE FOR RESIDUE MG E 301
09AC9SOFTWAREHIS E:63 , ASP E:101 , GLU E:219 , MG E:301 , HOH E:357BINDING SITE FOR RESIDUE MG E 302
10BC1SOFTWAREHIS F:63 , HIS F:64 , HIS F:215 , GLU F:219 , MG F:302 , HOH F:499BINDING SITE FOR RESIDUE MG F 301
11BC2SOFTWAREHIS F:63 , ASP F:101 , GLU F:219 , MG F:301 , HOH F:335BINDING SITE FOR RESIDUE MG F 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1NMP)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1NMP)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1NMP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1NMP)

(-) Exons   (0, 0)

(no "Exon" information available for 1NMP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECO57 | P0AFP8 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECO57     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpa_ A: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpA01 A:1-96,A:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpA01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhh.eeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp A   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain A from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOL6 | P0AFP7 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOL6     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpa_ A: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpA01 A:1-96,A:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpA01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhh.eeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp A   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain A from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOLI | P0AFP6 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOLI     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpa_ A: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpA01 A:1-96,A:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpA01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhh.eeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp A   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain B from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECO57 | P0AFP8 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECO57     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpb_ B: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpB01 B:1-96,B:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpB01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...........eeee.......eeeeeee.hhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeeee...hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp B   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain B from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOL6 | P0AFP7 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOL6     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpb_ B: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpB01 B:1-96,B:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpB01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...........eeee.......eeeeeee.hhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeeee...hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp B   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain B from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOLI | P0AFP6 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOLI     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpb_ B: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpB01 B:1-96,B:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpB01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...........eeee.......eeeeeee.hhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeeee...hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp B   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain C from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECO57 | P0AFP8 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECO57     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpc_ C: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpC01 C:1-96,C:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpC01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh..........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee............hhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp C   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain C from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOL6 | P0AFP7 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOL6     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpc_ C: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpC01 C:1-96,C:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpC01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh..........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee............hhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp C   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain C from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOLI | P0AFP6 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOLI     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpc_ C: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpC01 C:1-96,C:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpC01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh..........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee............hhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp C   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain D from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECO57 | P0AFP8 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECO57     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpd_ D: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpD01 D:1-96,D:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpD01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh......eeee.......eeeeeee.hhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeeee...hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp D   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain D from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOL6 | P0AFP7 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOL6     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpd_ D: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpD01 D:1-96,D:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpD01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh......eeee.......eeeeeee.hhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeeee...hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp D   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain D from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOLI | P0AFP6 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOLI     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpd_ D: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpD01 D:1-96,D:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpD01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh......eeee.......eeeeeee.hhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeeee...hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp D   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain E from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECO57 | P0AFP8 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECO57     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpe_ E: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpE01 E:1-96,E:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpE01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh......eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp E   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain E from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOL6 | P0AFP7 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOL6     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpe_ E: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpE01 E:1-96,E:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpE01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh......eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp E   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain E from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOLI | P0AFP6 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOLI     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpe_ E: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpE01 E:1-96,E:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpE01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh......eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp E   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain F from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECO57 | P0AFP8 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECO57     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpf_ F: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpF01 F:1-96,F:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpF01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh..........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp F   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain F from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOL6 | P0AFP7 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOL6     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpf_ F: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpF01 F:1-96,F:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpF01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh..........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp F   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       


Chain F from PDB  Type:PROTEIN  Length:247
 aligned with GCH1L_ECOLI | P0AFP6 from UniProtKB/Swiss-Prot  Length:247

    Alignment length:247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       
          GCH1L_ECOLI     1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
               SCOP domains d1nmpf_ F: Hypothetical protein YbgI                                                                                                                                                                                                                    SCOP domains
               CATH domains 1nmpF01 F:1-96,F:219-241 NIF3 (NGG1p interacting factor 3)-like                                 --------------------------------------------------------------------------------------------------------------------------1nmpF01                ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh..........eeee.......eeeeeee.hhhhhhhhhhh...eeeeee...........hhhhhhhhhhhhhh..eeee.hhhhhhh...hhhhhhhhhhheeeeeeee..eeeeeeeeeehhhhhhhhhhhhhh...eee.......eeeeee....hhhhhhhhhhhh..eeee...hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhhhhhhhh..eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nmp F   1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA 247
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1NMP)

(-) Gene Ontology  (6, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (GCH1L_ECOL6 | P0AFP7)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0006281    DNA repair    The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
    GO:0006974    cellular response to DNA damage stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.

Chain A,B,C,D,E,F   (GCH1L_ECOLI | P0AFP6)
molecular function
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0006281    DNA repair    The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
    GO:0006974    cellular response to DNA damage stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
    GO:0010212    response to ionizing radiation    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain A,B,C,D,E,F   (GCH1L_ECO57 | P0AFP8)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0006281    DNA repair    The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
    GO:0006974    cellular response to DNA damage stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.

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  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
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  GCH1L_ECO57 | P0AFP8
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  GCH1L_ECOL6 | P0AFP7
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  GCH1L_ECOLI | P0AFP6
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  GCH1L_ECO57 | P0AFP8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        GCH1L_ECO57 | P0AFP8: 1nmo
        GCH1L_ECOL6 | P0AFP7: 1nmo
        GCH1L_ECOLI | P0AFP6: 1nmo

(-) Related Entries Specified in the PDB File

ybgi