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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL GENOMICS, YBGI PROTEIN, UNKNOWN FUNCTION
Keywords YBGI, HYPOTHETICAL PROTEIN, TOROIDAL STRUCTURE, STRUCTURE 2 PROJECT, S2F, STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1NMP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HYPOTHETICAL PROTEIN YBGI  A 247 1897 0
2  Protein   HYPOTHETICAL PROTEIN YBGI  B 247 1897 0
3  Protein   HYPOTHETICAL PROTEIN YBGI  C 247 1897 0
4  Protein   HYPOTHETICAL PROTEIN YBGI  D 247 1897 0
5  Protein   HYPOTHETICAL PROTEIN YBGI  E 247 1897 0
6  Protein   HYPOTHETICAL PROTEIN YBGI  F 247 1897 0
7  Ligand   HYPOTHETICAL PROTEIN YBGI  A 2 0 2
8  Ligand   HYPOTHETICAL PROTEIN YBGI  B 1 0 1
9  Ligand   HYPOTHETICAL PROTEIN YBGI  C 2 0 2
10  Ligand   HYPOTHETICAL PROTEIN YBGI  D 2 0 2
11  Ligand   HYPOTHETICAL PROTEIN YBGI  E 2 0 2
12  Ligand   HYPOTHETICAL PROTEIN YBGI  F 2 0 2
13 Water     576 0 576
total       2069 11382 587

Proteins
Unit 1 MET1 LYS2 ASN3 THR4 GLU5 LEU6 GLU7 GLN8 LEU9 ILE10 ASN11 GLU12 LYS13 LEU14 ASN15 SER16 ALA17 ALA18 ILE19 SER20 ASP21 TYR22 ALA23 PRO24 ASN25 GLY26 LEU27 GLN28 VAL29 GLU30 GLY31 LYS32 GLU33 THR34 VAL35 GLN36 LYS37 ILE38 VAL39 THR40 GLY41 VAL42 THR43 ALA44 SER45 GLN46 ALA47 LEU48 LEU49 ASP50 GLU51 ALA52 VAL53 ARG54 LEU55 GLY56 ALA57 ASP58 ALA59 VAL60 ILE61 VAL62 HIS63 HIS64 GLY65 TYR66 PHE67 TRP68 LYS69 GLY70 GLU71 SER72 PRO73 VAL74 ILE75 ARG76 GLY77 MET78 LYS79 ARG80 ASN81 ARG82 LEU83 LYS84 THR85 LEU86 LEU87 ALA88 ASN89 ASP90 ILE91 ASN92 LEU93 TYR94 GLY95 TRP96 HIS97 LEU98 PRO99 LEU100 ASP101 ALA102 HIS103 PRO104 GLU105 LEU106 GLY107 ASN108 ASN109 ALA110 GLN111 LEU112 ALA113 ALA114 LEU115 LEU116 GLY117 ILE118 THR119 VAL120 MET121 GLY122 GLU123 ILE124 GLU125 PRO126 LEU127 VAL128 PRO129 TRP130 GLY131 GLU132 LEU133 THR134 MET135 PRO136 VAL137 PRO138 GLY139 LEU140 GLU141 LEU142 ALA143 SER144 TRP145 ILE146 GLU147 ALA148 ARG149 LEU150 GLY151 ARG152 LYS153 PRO154 LEU155 TRP156 CYS157 GLY158 ASP159 THR160 GLY161 PRO162 GLU163 VAL164 VAL165 GLN166 ARG167 VAL168 ALA169 TRP170 CYS171 THR172 GLY173 GLY174 GLY175 GLN176 SER177 PHE178 ILE179 ASP180 SER181 ALA182 ALA183 ARG184 PHE185 GLY186 VAL187 ASP188 ALA189 PHE190 ILE191 THR192 GLY193 GLU194 VAL195 SER196 GLU197 GLN198 THR199 ILE200 HIS201 SER202 ALA203 ARG204 GLU205 GLN206 GLY207 LEU208 HIS209 PHE210 TYR211 ALA212 ALA213 GLY214 HIS215 HIS216 ALA217 THR218 GLU219 ARG220 GLY221 GLY222 ILE223 ARG224 ALA225 LEU226 SER227 GLU228 TRP229 LEU230 ASN231 GLU232 ASN233 THR234 ASP235 LEU236 ASP237 VAL238 THR239 PHE240 ILE241 ASP242 ILE243 PRO244 ASN245 PRO246 ALA247
Unit 2 MET1 LYS2 ASN3 THR4 GLU5 LEU6 GLU7 GLN8 LEU9 ILE10 ASN11 GLU12 LYS13 LEU14 ASN15 SER16 ALA17 ALA18 ILE19 SER20 ASP21 TYR22 ALA23 PRO24 ASN25 GLY26 LEU27 GLN28 VAL29 GLU30 GLY31 LYS32 GLU33 THR34 VAL35 GLN36 LYS37 ILE38 VAL39 THR40 GLY41 VAL42 THR43 ALA44 SER45 GLN46 ALA47 LEU48 LEU49 ASP50 GLU51 ALA52 VAL53 ARG54 LEU55 GLY56 ALA57 ASP58 ALA59 VAL60 ILE61 VAL62 HIS63 HIS64 GLY65 TYR66 PHE67 TRP68 LYS69 GLY70 GLU71 SER72 PRO73 VAL74 ILE75 ARG76 GLY77 MET78 LYS79 ARG80 ASN81 ARG82 LEU83 LYS84 THR85 LEU86 LEU87 ALA88 ASN89 ASP90 ILE91 ASN92 LEU93 TYR94 GLY95 TRP96 HIS97 LEU98 PRO99 LEU100 ASP101 ALA102 HIS103 PRO104 GLU105 LEU106 GLY107 ASN108 ASN109 ALA110 GLN111 LEU112 ALA113 ALA114 LEU115 LEU116 GLY117 ILE118 THR119 VAL120 MET121 GLY122 GLU123 ILE124 GLU125 PRO126 LEU127 VAL128 PRO129 TRP130 GLY131 GLU132 LEU133 THR134 MET135 PRO136 VAL137 PRO138 GLY139 LEU140 GLU141 LEU142 ALA143 SER144 TRP145 ILE146 GLU147 ALA148 ARG149 LEU150 GLY151 ARG152 LYS153 PRO154 LEU155 TRP156 CYS157 GLY158 ASP159 THR160 GLY161 PRO162 GLU163 VAL164 VAL165 GLN166 ARG167 VAL168 ALA169 TRP170 CYS171 THR172 GLY173 GLY174 GLY175 GLN176 SER177 PHE178 ILE179 ASP180 SER181 ALA182 ALA183 ARG184 PHE185 GLY186 VAL187 ASP188 ALA189 PHE190 ILE191 THR192 GLY193 GLU194 VAL195 SER196 GLU197 GLN198 THR199 ILE200 HIS201 SER202 ALA203 ARG204 GLU205 GLN206 GLY207 LEU208 HIS209 PHE210 TYR211 ALA212 ALA213 GLY214 HIS215 HIS216 ALA217 THR218 GLU219 ARG220 GLY221 GLY222 ILE223 ARG224 ALA225 LEU226 SER227 GLU228 TRP229 LEU230 ASN231 GLU232 ASN233 THR234 ASP235 LEU236 ASP237 VAL238 THR239 PHE240 ILE241 ASP242 ILE243 PRO244 ASN245 PRO246 ALA247
Unit 3 MET1 LYS2 ASN3 THR4 GLU5 LEU6 GLU7 GLN8 LEU9 ILE10 ASN11 GLU12 LYS13 LEU14 ASN15 SER16 ALA17 ALA18 ILE19 SER20 ASP21 TYR22 ALA23 PRO24 ASN25 GLY26 LEU27 GLN28 VAL29 GLU30 GLY31 LYS32 GLU33 THR34 VAL35 GLN36 LYS37 ILE38 VAL39 THR40 GLY41 VAL42 THR43 ALA44 SER45 GLN46 ALA47 LEU48 LEU49 ASP50 GLU51 ALA52 VAL53 ARG54 LEU55 GLY56 ALA57 ASP58 ALA59 VAL60 ILE61 VAL62 HIS63 HIS64 GLY65 TYR66 PHE67 TRP68 LYS69 GLY70 GLU71 SER72 PRO73 VAL74 ILE75 ARG76 GLY77 MET78 LYS79 ARG80 ASN81 ARG82 LEU83 LYS84 THR85 LEU86 LEU87 ALA88 ASN89 ASP90 ILE91 ASN92 LEU93 TYR94 GLY95 TRP96 HIS97 LEU98 PRO99 LEU100 ASP101 ALA102 HIS103 PRO104 GLU105 LEU106 GLY107 ASN108 ASN109 ALA110 GLN111 LEU112 ALA113 ALA114 LEU115 LEU116 GLY117 ILE118 THR119 VAL120 MET121 GLY122 GLU123 ILE124 GLU125 PRO126 LEU127 VAL128 PRO129 TRP130 GLY131 GLU132 LEU133 THR134 MET135 PRO136 VAL137 PRO138 GLY139 LEU140 GLU141 LEU142 ALA143 SER144 TRP145 ILE146 GLU147 ALA148 ARG149 LEU150 GLY151 ARG152 LYS153 PRO154 LEU155 TRP156 CYS157 GLY158 ASP159 THR160 GLY161 PRO162 GLU163 VAL164 VAL165 GLN166 ARG167 VAL168 ALA169 TRP170 CYS171 THR172 GLY173 GLY174 GLY175 GLN176 SER177 PHE178 ILE179 ASP180 SER181 ALA182 ALA183 ARG184 PHE185 GLY186 VAL187 ASP188 ALA189 PHE190 ILE191 THR192 GLY193 GLU194 VAL195 SER196 GLU197 GLN198 THR199 ILE200 HIS201 SER202 ALA203 ARG204 GLU205 GLN206 GLY207 LEU208 HIS209 PHE210 TYR211 ALA212 ALA213 GLY214 HIS215 HIS216 ALA217 THR218 GLU219 ARG220 GLY221 GLY222 ILE223 ARG224 ALA225 LEU226 SER227 GLU228 TRP229 LEU230 ASN231 GLU232 ASN233 THR234 ASP235 LEU236 ASP237 VAL238 THR239 PHE240 ILE241 ASP242 ILE243 PRO244 ASN245 PRO246 ALA247
Unit 4 MET1 LYS2 ASN3 THR4 GLU5 LEU6 GLU7 GLN8 LEU9 ILE10 ASN11 GLU12 LYS13 LEU14 ASN15 SER16 ALA17 ALA18 ILE19 SER20 ASP21 TYR22 ALA23 PRO24 ASN25 GLY26 LEU27 GLN28 VAL29 GLU30 GLY31 LYS32 GLU33 THR34 VAL35 GLN36 LYS37 ILE38 VAL39 THR40 GLY41 VAL42 THR43 ALA44 SER45 GLN46 ALA47 LEU48 LEU49 ASP50 GLU51 ALA52 VAL53 ARG54 LEU55 GLY56 ALA57 ASP58 ALA59 VAL60 ILE61 VAL62 HIS63 HIS64 GLY65 TYR66 PHE67 TRP68 LYS69 GLY70 GLU71 SER72 PRO73 VAL74 ILE75 ARG76 GLY77 MET78 LYS79 ARG80 ASN81 ARG82 LEU83 LYS84 THR85 LEU86 LEU87 ALA88 ASN89 ASP90 ILE91 ASN92 LEU93 TYR94 GLY95 TRP96 HIS97 LEU98 PRO99 LEU100 ASP101 ALA102 HIS103 PRO104 GLU105 LEU106 GLY107 ASN108 ASN109 ALA110 GLN111 LEU112 ALA113 ALA114 LEU115 LEU116 GLY117 ILE118 THR119 VAL120 MET121 GLY122 GLU123 ILE124 GLU125 PRO126 LEU127 VAL128 PRO129 TRP130 GLY131 GLU132 LEU133 THR134 MET135 PRO136 VAL137 PRO138 GLY139 LEU140 GLU141 LEU142 ALA143 SER144 TRP145 ILE146 GLU147 ALA148 ARG149 LEU150 GLY151 ARG152 LYS153 PRO154 LEU155 TRP156 CYS157 GLY158 ASP159 THR160 GLY161 PRO162 GLU163 VAL164 VAL165 GLN166 ARG167 VAL168 ALA169 TRP170 CYS171 THR172 GLY173 GLY174 GLY175 GLN176 SER177 PHE178 ILE179 ASP180 SER181 ALA182 ALA183 ARG184 PHE185 GLY186 VAL187 ASP188 ALA189 PHE190 ILE191 THR192 GLY193 GLU194 VAL195 SER196 GLU197 GLN198 THR199 ILE200 HIS201 SER202 ALA203 ARG204 GLU205 GLN206 GLY207 LEU208 HIS209 PHE210 TYR211 ALA212 ALA213 GLY214 HIS215 HIS216 ALA217 THR218 GLU219 ARG220 GLY221 GLY222 ILE223 ARG224 ALA225 LEU226 SER227 GLU228 TRP229 LEU230 ASN231 GLU232 ASN233 THR234 ASP235 LEU236 ASP237 VAL238 THR239 PHE240 ILE241 ASP242 ILE243 PRO244 ASN245 PRO246 ALA247
Unit 5 MET1 LYS2 ASN3 THR4 GLU5 LEU6 GLU7 GLN8 LEU9 ILE10 ASN11 GLU12 LYS13 LEU14 ASN15 SER16 ALA17 ALA18 ILE19 SER20 ASP21 TYR22 ALA23 PRO24 ASN25 GLY26 LEU27 GLN28 VAL29 GLU30 GLY31 LYS32 GLU33 THR34 VAL35 GLN36 LYS37 ILE38 VAL39 THR40 GLY41 VAL42 THR43 ALA44 SER45 GLN46 ALA47 LEU48 LEU49 ASP50 GLU51 ALA52 VAL53 ARG54 LEU55 GLY56 ALA57 ASP58 ALA59 VAL60 ILE61 VAL62 HIS63 HIS64 GLY65 TYR66 PHE67 TRP68 LYS69 GLY70 GLU71 SER72 PRO73 VAL74 ILE75 ARG76 GLY77 MET78 LYS79 ARG80 ASN81 ARG82 LEU83 LYS84 THR85 LEU86 LEU87 ALA88 ASN89 ASP90 ILE91 ASN92 LEU93 TYR94 GLY95 TRP96 HIS97 LEU98 PRO99 LEU100 ASP101 ALA102 HIS103 PRO104 GLU105 LEU106 GLY107 ASN108 ASN109 ALA110 GLN111 LEU112 ALA113 ALA114 LEU115 LEU116 GLY117 ILE118 THR119 VAL120 MET121 GLY122 GLU123 ILE124 GLU125 PRO126 LEU127 VAL128 PRO129 TRP130 GLY131 GLU132 LEU133 THR134 MET135 PRO136 VAL137 PRO138 GLY139 LEU140 GLU141 LEU142 ALA143 SER144 TRP145 ILE146 GLU147 ALA148 ARG149 LEU150 GLY151 ARG152 LYS153 PRO154 LEU155 TRP156 CYS157 GLY158 ASP159 THR160 GLY161 PRO162 GLU163 VAL164 VAL165 GLN166 ARG167 VAL168 ALA169 TRP170 CYS171 THR172 GLY173 GLY174 GLY175 GLN176 SER177 PHE178 ILE179 ASP180 SER181 ALA182 ALA183 ARG184 PHE185 GLY186 VAL187 ASP188 ALA189 PHE190 ILE191 THR192 GLY193 GLU194 VAL195 SER196 GLU197 GLN198 THR199 ILE200 HIS201 SER202 ALA203 ARG204 GLU205 GLN206 GLY207 LEU208 HIS209 PHE210 TYR211 ALA212 ALA213 GLY214 HIS215 HIS216 ALA217 THR218 GLU219 ARG220 GLY221 GLY222 ILE223 ARG224 ALA225 LEU226 SER227 GLU228 TRP229 LEU230 ASN231 GLU232 ASN233 THR234 ASP235 LEU236 ASP237 VAL238 THR239 PHE240 ILE241 ASP242 ILE243 PRO244 ASN245 PRO246 ALA247
Unit 6 MET1 LYS2 ASN3 THR4 GLU5 LEU6 GLU7 GLN8 LEU9 ILE10 ASN11 GLU12 LYS13 LEU14 ASN15 SER16 ALA17 ALA18 ILE19 SER20 ASP21 TYR22 ALA23 PRO24 ASN25 GLY26 LEU27 GLN28 VAL29 GLU30 GLY31 LYS32 GLU33 THR34 VAL35 GLN36 LYS37 ILE38 VAL39 THR40 GLY41 VAL42 THR43 ALA44 SER45 GLN46 ALA47 LEU48 LEU49 ASP50 GLU51 ALA52 VAL53 ARG54 LEU55 GLY56 ALA57 ASP58 ALA59 VAL60 ILE61 VAL62 HIS63 HIS64 GLY65 TYR66 PHE67 TRP68 LYS69 GLY70 GLU71 SER72 PRO73 VAL74 ILE75 ARG76 GLY77 MET78 LYS79 ARG80 ASN81 ARG82 LEU83 LYS84 THR85 LEU86 LEU87 ALA88 ASN89 ASP90 ILE91 ASN92 LEU93 TYR94 GLY95 TRP96 HIS97 LEU98 PRO99 LEU100 ASP101 ALA102 HIS103 PRO104 GLU105 LEU106 GLY107 ASN108 ASN109 ALA110 GLN111 LEU112 ALA113 ALA114 LEU115 LEU116 GLY117 ILE118 THR119 VAL120 MET121 GLY122 GLU123 ILE124 GLU125 PRO126 LEU127 VAL128 PRO129 TRP130 GLY131 GLU132 LEU133 THR134 MET135 PRO136 VAL137 PRO138 GLY139 LEU140 GLU141 LEU142 ALA143 SER144 TRP145 ILE146 GLU147 ALA148 ARG149 LEU150 GLY151 ARG152 LYS153 PRO154 LEU155 TRP156 CYS157 GLY158 ASP159 THR160 GLY161 PRO162 GLU163 VAL164 VAL165 GLN166 ARG167 VAL168 ALA169 TRP170 CYS171 THR172 GLY173 GLY174 GLY175 GLN176 SER177 PHE178 ILE179 ASP180 SER181 ALA182 ALA183 ARG184 PHE185 GLY186 VAL187 ASP188 ALA189 PHE190 ILE191 THR192 GLY193 GLU194 VAL195 SER196 GLU197 GLN198 THR199 ILE200 HIS201 SER202 ALA203 ARG204 GLU205 GLN206 GLY207 LEU208 HIS209 PHE210 TYR211 ALA212 ALA213 GLY214 HIS215 HIS216 ALA217 THR218 GLU219 ARG220 GLY221 GLY222 ILE223 ARG224 ALA225 LEU226 SER227 GLU228 TRP229 LEU230 ASN231 GLU232 ASN233 THR234 ASP235 LEU236 ASP237 VAL238 THR239 PHE240 ILE241 ASP242 ILE243 PRO244 ASN245 PRO246 ALA247

Ligands
Unit 7 MG301 MG302
Unit 8 MG302
Unit 9 MG301 MG302
Unit 10 MG301 MG302
Unit 11 MG301 MG302
Unit 12 MG301 MG302

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany