Chain A from PDB Type:PROTEIN Length:456
aligned with SYP_METJA | Q58635 from UniProtKB/Swiss-Prot Length:455
Alignment length:456
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449
SYP_METJA - -MEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPFKEEIYNEELEEKVEATILGETEYKGNKYIAIAKTY 455
SCOP domains d1nj8a3 A:0-267 Prolyl-tRNA synthetase (ProRS) d1nj8a1 A:268-393 Prolyl-tRNA synthetase (ProRS) domain d1nj8a2 A:394-455 C-terminal domain of ProRS SCOP domains
CATH domains 1nj8A01 A:0-273 Bira Bifunctional Protein; Domain 2 1nj8A02 A:274-376 [code=3.40.50.800, no name defined] -----------------1nj8A03 A:394-454 [code=3.30.110.30, no name defined] - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhh..ee.....eeehhhhhhhh..hhhhhhh.eeeee....eeeeeeee...hhhhhhhhhhh...........eeeee.....................eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh...eeeee..........eeeeeeee.....eeeeeeeeeeehhhhhhh..eee.....eee.eeeeeee.hhhhhhhhhhhh...............eeeee.....hhhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...eeeeehhhhhhh.eeeeee.....eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhheee....hhhhhhhhh.....eeeee.hhhhhhhhhhhhhh..eeeeee....eeeeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1nj8 A 0 MLEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPFKEEIYNEELEEKVEATILGETEYKGNKYIAIAKTY 455
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449
Chain B from PDB Type:PROTEIN Length:456
aligned with SYP_METJA | Q58635 from UniProtKB/Swiss-Prot Length:455
Alignment length:456
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449
SYP_METJA - -MEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPFKEEIYNEELEEKVEATILGETEYKGNKYIAIAKTY 455
SCOP domains d1nj8b3 B:0-267 Prolyl-tRNA synthetase (ProRS) d1nj8b1 B:268-393 Prolyl-tRNA synthetase (ProRS) domain d1nj8b2 B:394-455 C-terminal domain of ProRS SCOP domains
CATH domains 1nj8B01 B:0-273 Bira Bifunctional Protein; Domain 2 1nj8B02 B:274-376 [code=3.40.50.800, no name defined] -----------------1nj8B03 B:394-454 [code=3.30.110.30, no name defined] - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhhh..ee.........eehhhhhhhhhhhhhhhhhhhhh..eee.....eeehhhhhhh......hhhhh.eeeee..ee....eee...hhhhhhhhhhhhh.hhhhh.eeeeeeeeee..............eeeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhh.....ee.............eeeeeeee.....eeeeeeeee..hhhhhhh..eee.....eee.ee..eee.hhhhhhhhhhhh...............eeee.......hhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...eeee.hhhhhhh.eeeeee.......eee..hhhhhhhhhhhhhhhhhhhhhhhhhhh.eee....hhhhhhhhhh....eee...hhhhhhhhhhhhhh..eeeee......eeeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1nj8 B 0 MLEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPFKEEIYNEELEEKVEATILGETEYKGNKYIAIAKTY 455
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449
Chain C from PDB Type:PROTEIN Length:456
aligned with SYP_METJA | Q58635 from UniProtKB/Swiss-Prot Length:455
Alignment length:456
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449
SYP_METJA - -MEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPFKEEIYNEELEEKVEATILGETEYKGNKYIAIAKTY 455
SCOP domains d1nj8c3 C:0-267 Prolyl-tRNA synthetase (ProRS) d1nj8c1 C:268-393 Prolyl-tRNA synthetase (ProRS) domain d1nj8c2 C:394-455 C-terminal domain of ProRS SCOP domains
CATH domains 1nj8C01 C:0-273 Bira Bifunctional Protein; Domain 2 1nj8C02 C:274-376 [code=3.40.50.800, no name defined] -----------------1nj8C03 C:394-454 [code=3.30.110.30, no name defined] - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhh..ee.....eeehhhhhhhh..hhhhhhh.eeeee....eeeeeeee...hhhhhhhhhhh...........eeeee.....................eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh...eeeee..........eeeeeeee.....eeeeeeeeeeehhhhhhh..eee.....eee.eeeeeee.hhhhhhhhhhhh...............eeeee.....hhhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...eeeeehhhhhhh.eeeeee.....eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhheee....hhhhhhhhh.....eeeee.hhhhhhhhhhhhhh..eeeeee....eeeeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1nj8 C 0 MLEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPFKEEIYNEELEEKVEATILGETEYKGNKYIAIAKTY 455
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449
Chain D from PDB Type:PROTEIN Length:456
aligned with SYP_METJA | Q58635 from UniProtKB/Swiss-Prot Length:455
Alignment length:456
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449
SYP_METJA - -MEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPFKEEIYNEELEEKVEATILGETEYKGNKYIAIAKTY 455
SCOP domains d1nj8d3 D:0-267 Prolyl-tRNA synthetase (ProRS) d1nj8d1 D:268-393 Prolyl-tRNA synthetase (ProRS) domain d1nj8d2 D:394-455 C-terminal domain of ProRS SCOP domains
CATH domains 1nj8D01 D:0-273 Bira Bifunctional Protein; Domain 2 1nj8D02 D:274-376 [code=3.40.50.800, no name defined] -----------------1nj8D03 D:394-454 [code=3.30.110.30, no name defined] - CATH domains
Pfam domains (1) ------------------------------------tRNA-synt_2b-1nj8D09 D:36-209 ----------------------------------------------------------------------HGTP_anticodon-1nj8D01 D:280-374 -------------------ProRS-C_2-1nj8D05 D:394-455 Pfam domains (1)
Pfam domains (2) ------------------------------------tRNA-synt_2b-1nj8D10 D:36-209 ----------------------------------------------------------------------HGTP_anticodon-1nj8D02 D:280-374 -------------------ProRS-C_2-1nj8D06 D:394-455 Pfam domains (2)
Pfam domains (3) ------------------------------------tRNA-synt_2b-1nj8D11 D:36-209 ----------------------------------------------------------------------HGTP_anticodon-1nj8D03 D:280-374 -------------------ProRS-C_2-1nj8D07 D:394-455 Pfam domains (3)
Pfam domains (4) ------------------------------------tRNA-synt_2b-1nj8D12 D:36-209 ----------------------------------------------------------------------HGTP_anticodon-1nj8D04 D:280-374 -------------------ProRS-C_2-1nj8D08 D:394-455 Pfam domains (4)
Sec.struct. author ..hhhhhhhhhhhhh..ee.........eehhhhhhhhhhhhhhhhhhhhh..eee.....eeehhhhhhh......hhhhh.eeeee..ee....eee...hhhhhhhhhhhhh.hhhhh.eeeeeeeeee..............eeeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhh.....ee.............eeeeeeee.....eeeeeeeee..hhhhhhh..eee.....eee.ee..eee.hhhhhhhhhhhh...............eeee.......hhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...eeee.hhhhhhh.eeeeee.......eee..hhhhhhhhhhhhhhhhhhhhhhhhhhh.eee....hhhhhhhhhh....eee...hhhhhhhhhhhhhh..eeeee......eeeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1nj8 D 0 MLEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPFKEEIYNEELEEKVEATILGETEYKGNKYIAIAKTY 455
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |