Chain A from PDB Type:PROTEIN Length:129
aligned with CAPSD_BPMS2 | P03612 from UniProtKB/Swiss-Prot Length:130
Alignment length:129
11 21 31 41 51 61 71 81 91 101 111 121
CAPSD_BPMS2 2 ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY 130
SCOP domains d1msta_ A: MS2 virus coat protein SCOP domains
CATH domains 1mstA00 A:1-129 MS2 Viral Coat Protein CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeee.......eeeeeee.....eeee.........eeeeeee.....eeeeeeeeeeeeeeeeee..eeeeeeeeeeeeeeeeeee....hhhhhhhhhhhhhh.....hhhhhhh...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
1mst A 1 ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVDLPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY 129
10 20 30 40 50 60 70 80 90 100 110 120
Chain B from PDB Type:PROTEIN Length:129
aligned with CAPSD_BPMS2 | P03612 from UniProtKB/Swiss-Prot Length:130
Alignment length:129
11 21 31 41 51 61 71 81 91 101 111 121
CAPSD_BPMS2 2 ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY 130
SCOP domains d1mstb_ B: MS2 virus coat protein SCOP domains
CATH domains 1mstB00 B:1-129 MS2 Viral Coat Protein CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeee.......eeeeeee.....eeeee........eeeeeeee....eeeeeeeeeee.................eeeeeeeeeee....hhhhhhhhhhhhhh.....hhhhhhh...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
1mst B 1 ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVDLPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY 129
10 20 30 40 50 60 70 80 90 100 110 120
Chain C from PDB Type:PROTEIN Length:129
aligned with CAPSD_BPMS2 | P03612 from UniProtKB/Swiss-Prot Length:130
Alignment length:129
11 21 31 41 51 61 71 81 91 101 111 121
CAPSD_BPMS2 2 ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY 130
SCOP domains d1mstc_ C: MS2 virus coat protein SCOP domains
CATH domains 1mstC00 C:1-129 MS2 Viral Coat Protein CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeee.......eeeeeee.....eeeee........eeeeeeeeee..eeeeeeeeeeeeeeeeee..eeeeeeeeeeeeeeeeeee....hhhhhhhhhhhhhhh....hhhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
1mst C 1 ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVDLPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY 129
10 20 30 40 50 60 70 80 90 100 110 120
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |