Chain A from PDB Type:PROTEIN Length:472
aligned with SCOT1_PIG | Q29551 from UniProtKB/Swiss-Prot Length:520
Alignment length:481
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519
SCOT1_PIG 40 TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEEDVKTRSGKLGDNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDSKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQVTT 520
SCOP domains d1m3ea1 A:1-250 Succinate:CoA transferase, N-terminal domain ---------d1m3ea2 A:260-481 Succinate:CoA transferase, C-terminal domain SCOP domains
CATH domains 1m3eA01 A:1-233 Glutaconate Coenzyme A-transferase --------------------------1m3eA02 A:260-474 Glutaconate Coenzyme A-transferase; Chain B ------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee.hhhhhhh......eeee........hhhhhhhhhhhh...eeee.........hhhhhhhh..eeeeee.....hhhhhhhhhh...eeee.hhhhhhhhhhhhhhh..eeee.....hhhhhh..eeee.....eeee.....eeee..eeeeeee...eeeeeeeeeeee....ee.hhhhh.hhhhhh..eeeeeeeeeeee.....hhhhh..hhhhh.eeee..................---------.hhhhhhhhhhhhhh....eeee..hhhhhhhhhh......eeee...eeee....hhhhh.............eeeeeee.hhhhhhhhhhh....eeee...eee....ee.............hhhhhh.....eeeee...ee...ee.ee..............eee...eeeeee...eeeeeee....hhhhhhh......eeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------COA_TRANSF_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COA_TRANS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3e A 1 TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRmISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPmCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEED---------DNVRERIIKRAALEFEDGmYANLGIGIPLLASNFISPNmTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAmIRGGHVNLTmLGAmQVSKYGDLANWmIPGKLVKGmGGAmDLVSSAKTKVVVTmEHSAKGNAHKImEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPmQQVTT 481
10 20 30 40 50 60 70 | 80 90 100 110 120 130 140 150 160 170 180 190 | 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 | 370 | 380 | 390 400 | 410 | 420 430 440 450 460 470 | 480
72-MSE 195-MSE 250 260 278-MSE 298-MSE 349-MSE 359-MSE 375-MSE 384-MSE 402-MSE 414-MSE 476-MSE
363-MSE 388-MSE
Chain B from PDB Type:PROTEIN Length:473
aligned with SCOT1_PIG | Q29551 from UniProtKB/Swiss-Prot Length:520
Alignment length:481
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519
SCOT1_PIG 40 TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEEDVKTRSGKLGDNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDSKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQVTT 520
SCOP domains d1m3eb1 B:1-250 Succinate:CoA transferase, N-terminal domain --------d1m3eb2 B:259-481 Succinate:CoA transferase, C-terminal domain SCOP domains
CATH domains 1m3eB01 B:1-233 Glutaconate Coenzyme A-transferase --------------------------1m3eB02 B:260-474 Glutaconate Coenzyme A-transferase; Chain B ------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee.hhhhhhh......eeee........hhhhhhhhhhhh...eeee.........hhhhhhhh..eeeeee.....hhhhhhhhhh...eeee.hhhhhhhhhhhhhhh..eeee.....hhhhhh..eeee.....eeee.....eeee..eeeeeee...eeeeeeeeeeee....ee.hhhhh.hhhhhh..eeeeeeeeeeee.....hhhhh..hhhhh.eeee..................--------..hhhhhhhhhhhhhh....eeee..hhhhhhhhhh......eeee...eeee....hhhhh.............eeeeeee.hhhhhhhhhhh....eeee...eee....ee..ee...ee....hhhhhh.....eeeee...eehhhee.ee..............eee...eeeeee...eeeeeee....hhhhhhh......eeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------COA_TRANSF_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COA_TRANS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3e B 1 TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRmISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPmCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEED--------GDNVRERIIKRAALEFEDGmYANLGIGIPLLASNFISPNmTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAmIRGGHVNLTmLGAmQVSKYGDLANWmIPGKLVKGmGGAmDLVSSAKTKVVVTmEHSAKGNAHKImEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPmQQVTT 481
10 20 30 40 50 60 70 | 80 90 100 110 120 130 140 150 160 170 180 190 | 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 | 370 | 380 | 390 400 | 410 | 420 430 440 450 460 470 | 480
72-MSE 195-MSE 250 259 278-MSE 298-MSE 349-MSE 359-MSE 375-MSE 384-MSE 402-MSE 414-MSE 476-MSE
363-MSE 388-MSE
Chain C from PDB Type:PROTEIN Length:473
aligned with SCOT1_PIG | Q29551 from UniProtKB/Swiss-Prot Length:520
Alignment length:481
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519
SCOT1_PIG 40 TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEEDVKTRSGKLGDNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDSKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQVTT 520
SCOP domains d1m3ec1 C:1-250 Succinate:CoA transferase, N-terminal domain --------d1m3ec2 C:259-481 Succinate:CoA transferase, C-terminal domain SCOP domains
CATH domains 1m3eC01 C:1-233 Glutaconate Coenzyme A-transferase --------------------------1m3eC02 C:260-474 Glutaconate Coenzyme A-transferase; Chain B ------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee.hhhhhhh......eeee........hhhhhhhhhhhh...eeee.........hhhhhhhh..eeeeee.....hhhhhhhhhh...eeee.hhhhhhhhhhhhhhh..eeee.....hhhhhh..eeeee...eeeee.....eeee..eeeeeee...eeeeeeeeeeee....ee.hhhhh.hhhhhh..eeeeeeeeeeee.....hhhhh..hhhhh.eeee..................--------..hhhhhhhhhhhhhh....eeee..hhhhhhhhhh......eeee...eeee....hhhhh.............eeeeeee.hhhhhhhhhhh....eeee...eee....ee..ee...ee....hhhhhh.....eeeee...ee...ee.ee..............eee...eeeeee...eeeeeee....hhhhhhh......eeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------COA_TRANSF_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COA_TRANS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3e C 1 TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRmISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPmCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEED--------GDNVRERIIKRAALEFEDGmYANLGIGIPLLASNFISPNmTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAmIRGGHVNLTmLGAmQVSKYGDLANWmIPGKLVKGmGGAmDLVSSAKTKVVVTmEHSAKGNAHKImEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPmQQVTT 481
10 20 30 40 50 60 70 | 80 90 100 110 120 130 140 150 160 170 180 190 | 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 | 370 | 380 | 390 400 | 410 | 420 430 440 450 460 470 | 480
72-MSE 195-MSE 250 259 278-MSE 298-MSE 349-MSE 359-MSE 375-MSE 384-MSE 402-MSE 414-MSE 476-MSE
363-MSE 388-MSE
Chain D from PDB Type:PROTEIN Length:472
aligned with SCOT1_PIG | Q29551 from UniProtKB/Swiss-Prot Length:520
Alignment length:481
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519
SCOT1_PIG 40 TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEEDVKTRSGKLGDNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDSKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQVTT 520
SCOP domains d1m3ed1 D:1-250 Succinate:CoA transferase, N-terminal domain ---------d1m3ed2 D:260-481 Succinate:CoA transferase, C-terminal domain SCOP domains
CATH domains 1m3eD01 D:1-233 Glutaconate Coenzyme A-transferase --------------------------1m3eD02 D:260-474 Glutaconate Coenzyme A-transferase; Chain B ------- CATH domains
Pfam domains (1) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CoA_trans-1m3eD01 D:263-462 ------------------- Pfam domains (1)
Pfam domains (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CoA_trans-1m3eD02 D:263-462 ------------------- Pfam domains (2)
Pfam domains (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CoA_trans-1m3eD03 D:263-462 ------------------- Pfam domains (3)
Pfam domains (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CoA_trans-1m3eD04 D:263-462 ------------------- Pfam domains (4)
Pfam domains (5) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CoA_trans-1m3eD05 D:263-462 ------------------- Pfam domains (5)
Pfam domains (6) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CoA_trans-1m3eD06 D:263-462 ------------------- Pfam domains (6)
Pfam domains (7) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CoA_trans-1m3eD07 D:263-462 ------------------- Pfam domains (7)
Pfam domains (8) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CoA_trans-1m3eD08 D:263-462 ------------------- Pfam domains (8)
Sec.struct. author .eee.hhhhhhh......eeee........hhhhhhhhhhhh...eeee.........hhhhhhhh..eeeeee.....hhhhhhhhhh...eeee.hhhhhhhhhhhhhh...eeee.....hhhhhh..eeee.....eeee.....eeee..eeeeeee...eeeeeeeeeeee....ee.hhhhh.hhhhhh..eeeeeeeeeeee.....hhhhh..hhhhh.eeee..................---------.hhhhhhhhhhhhhh....eeee..hhhhhhhhhh......eeee...eeee....hhhhh.............eeeeeee.hhhhhhhhhhh....eeee...eee....ee.............hhhhhh.....eeeee...........ee..............eee...eeeeee...eeeeeee....hhhhhhh......eeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------COA_TRANSF_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COA_TRANS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3e D 1 TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRmISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPmCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEED---------DNVRERIIKRAALEFEDGmYANLGIGIPLLASNFISPNmTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAmIRGGHVNLTmLGAmQVSKYGDLANWmIPGKLVKGmGGAmDLVSSAKTKVVVTmEHSAKGNAHKImEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPmQQVTT 481
10 20 30 40 50 60 70 | 80 90 100 110 120 130 140 150 160 170 180 190 | 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 | 370 | 380 | 390 400 | 410 | 420 430 440 450 460 470 | 480
72-MSE 195-MSE 250 260 278-MSE 298-MSE 349-MSE 359-MSE 375-MSE 384-MSE 402-MSE 414-MSE 476-MSE
363-MSE 388-MSE
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |