1LQT - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   A COVALENT MODIFICATION OF NADP+ REVEALED BY THE ATOMIC RESOLUTION STRUCTURE OF FPRA, A MYCOBACTERIUM TUBERCULOSIS OXIDOREDUCTASE

Authors :   R. T. Bossi, A. Aliverti, D. Raimondi, F. Fischer, G. Zanetti, D. Ferrar N. Tahallah, C. S. Maier, A. J. R. Heck, M. Rizzi, A. Mattevi, Tb Struct Genomics Consortium (Tbsgc)

Date :   13 May 02 (Deposition) - 31 Jul 02 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.05

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Nadp+ Derivative, Tuberculosis, Oxidoreductase, Structural Genomics, Psi, Protein Structure Initiative, Tb Structural Genomics Consortium, Tbsgc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. T. Bossi, A. Aliverti, D. Raimondi, F. Fischer, G. Zanetti, D. Ferrari, N. Tahallah, C. S. Maier, A. J. R. Heck, M. Rizzi, A. Mattevi
A Covalent Modification Of Nadp+ Revealed By The Atomic Resolution Structure Of Fpra, A Mycobacterium Tuberculosis Oxidoreductase.
Biochemistry V. 41 8807 2002
PubMed-ID: 12102623 | Reference-DOI: 10.1021/BI025858A

Molecule 1 - FPRA
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	MYCOBACTERIUM TUBERCULOSIS
	Organism Taxid	:	1773
	Synonym	:	FERREDOXIN NADP REDUCTASE

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 15)

No.	Name	Count	Type	Full Name
1	ACT	11	Ligand/Ion	ACETATE ION
2	FAD	2	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
3	ODP	2	Ligand/Ion	4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE

Biological Unit 1 (3, 7)

No.	Name	Count	Type	Full Name
1	ACT	5	Ligand/Ion	ACETATE ION
2	FAD	1	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
3	ODP	1	Ligand/Ion	4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE

Biological Unit 2 (3, 8)

No.	Name	Count	Type	Full Name
1	ACT	6	Ligand/Ion	ACETATE ION
2	FAD	1	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
3	ODP	1	Ligand/Ion	4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE

Asymmetric Unit (15, 15)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:110 , MET A:111 , LEU A:112 , ASN A:113 , VAL A:322 , ODP A:2458 , HOH A:2833 , HOH A:3054	BINDING SITE FOR RESIDUE ACT A 1866
02	AC2	SOFTWARE	ALA B:148 , GLN B:192 , HOH B:4269	BINDING SITE FOR RESIDUE ACT B 1867
03	AC3	SOFTWARE	ARG A:452 , HOH A:3223 , HOH A:3309 , HOH A:3320 , HOH A:3373 , HIS B:422 , GLY B:454 , HOH B:3674 , HOH B:3985 , HOH B:4097	BINDING SITE FOR RESIDUE ACT B 1868
04	AC4	SOFTWARE	ASP A:56 , GLU A:214 , ACT A:1870 , HOH A:2842 , HOH A:3052	BINDING SITE FOR RESIDUE ACT A 1869
05	AC5	SOFTWARE	HIS A:57 , PRO A:58 , LYS A:59 , ILE A:60 , ACT A:1869 , HOH A:2636 , HOH A:3023 , HOH A:3186 , HOH A:3427	BINDING SITE FOR RESIDUE ACT A 1870
06	AC6	SOFTWARE	ALA A:71 , PHE A:78 , SER A:420 , HOH A:2546 , HOH A:2572 , HOH A:2672	BINDING SITE FOR RESIDUE ACT A 1871
07	AC7	SOFTWARE	ASN A:292 , ALA A:304 , HOH A:2531 , HOH A:2562 , GLU B:391	BINDING SITE FOR RESIDUE ACT A 1872
08	AC8	SOFTWARE	ARG B:2 , ASP B:31 , ASP B:33 , HOH B:3658 , HOH B:4281	BINDING SITE FOR RESIDUE ACT B 1873
09	AC9	SOFTWARE	ALA B:71 , PHE B:78 , SER B:420 , HOH B:3536 , HOH B:3849	BINDING SITE FOR RESIDUE ACT B 1874
10	BC1	SOFTWARE	ARG B:110 , MET B:111 , LEU B:112 , ASN B:113 , VAL B:322 , ODP B:3458 , HOH B:3971 , HOH B:3976	BINDING SITE FOR RESIDUE ACT B 1875
11	BC2	SOFTWARE	ODP B:3458 , HOH B:3470 , HOH B:3759 , HOH B:4079	BINDING SITE FOR RESIDUE ACT B 1876
12	BC3	SOFTWARE	GLY A:10 , GLY A:12 , PRO A:13 , SER A:14 , GLU A:40 , MET A:41 , GLY A:47 , LEU A:48 , GLY A:52 , VAL A:53 , ILE A:60 , VAL A:82 , VAL A:84 , ALA A:103 , VAL A:104 , GLY A:105 , VAL A:158 , TYR A:324 , GLY A:358 , TRP A:359 , GLY A:366 , VAL A:367 , ILE A:368 , ASN A:371 , ODP A:2458 , HOH A:2460 , HOH A:2461 , HOH A:2463 , HOH A:2465 , HOH A:2468 , HOH A:2469 , HOH A:2470 , HOH A:2505 , HOH A:2510 , HOH A:2606 , HOH A:2691 , HOH A:2826	BINDING SITE FOR RESIDUE FAD A 2457
13	BC4	SOFTWARE	ARG A:110 , ILE A:153 , ASN A:155 , GLY A:156 , ASN A:157 , VAL A:158 , ASP A:161 , ARG A:199 , ARG A:200 , ALA A:206 , GLU A:211 , SER A:321 , VAL A:322 , TRP A:359 , PRO A:364 , THR A:365 , GLY A:366 , VAL A:367 , ACT A:1866 , FAD A:2457 , HOH A:2459 , HOH A:2460 , HOH A:2471 , HOH A:2474 , HOH A:2476 , HOH A:2478 , HOH A:2482 , HOH A:2484 , HOH A:2496 , HOH A:2497 , HOH A:2533 , HOH A:2542 , HOH A:2614 , HOH A:2617 , HOH A:2715 , HOH A:2738 , HOH A:2753 , HOH A:2854 , HOH A:2870 , HOH A:3179 , HOH A:3322 , HOH A:3360	BINDING SITE FOR RESIDUE ODP A 2458
14	BC5	SOFTWARE	VAL B:9 , GLY B:10 , GLY B:12 , PRO B:13 , SER B:14 , GLU B:40 , MET B:41 , GLY B:47 , LEU B:48 , GLY B:52 , VAL B:53 , VAL B:82 , VAL B:84 , ALA B:103 , VAL B:104 , GLY B:105 , VAL B:158 , ASP B:161 , TYR B:324 , GLY B:358 , TRP B:359 , GLY B:366 , VAL B:367 , ILE B:368 , ASN B:371 , ODP B:3458 , HOH B:3461 , HOH B:3464 , HOH B:3466 , HOH B:3468 , HOH B:3479 , HOH B:3483 , HOH B:3525 , HOH B:3559 , HOH B:3586 , HOH B:3636 , HOH B:3845 , HOH B:4227	BINDING SITE FOR RESIDUE FAD B 3457
15	BC6	SOFTWARE	HIS B:57 , ARG B:110 , ILE B:153 , ASN B:155 , GLY B:156 , ASN B:157 , VAL B:158 , ASP B:161 , ARG B:199 , ARG B:200 , ALA B:206 , GLU B:211 , SER B:321 , VAL B:322 , PRO B:364 , GLY B:366 , VAL B:367 , ACT B:1875 , ACT B:1876 , FAD B:3457 , HOH B:3463 , HOH B:3468 , HOH B:3470 , HOH B:3474 , HOH B:3488 , HOH B:3491 , HOH B:3501 , HOH B:3513 , HOH B:3527 , HOH B:3542 , HOH B:3546 , HOH B:3554 , HOH B:3574 , HOH B:3586 , HOH B:3620 , HOH B:3767 , HOH B:3839 , HOH B:3852 , HOH B:3872 , HOH B:3964	BINDING SITE FOR RESIDUE ODP B 3458

(no "SS Bond" information available for 1LQT)

(no "Cis Peptide Bond" information available for 1LQT)

(no "SAP(SNP)/Variant" information available for 1LQT)

(no "PROSITE Motif" information available for 1LQT)

(no "Exon" information available for 1LQT)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:452
 aligned with FPRA_MYCTO | P9WIQ2 from UniProtKB/Swiss-Prot  Length:456

    Alignment length:455
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451     
           FPRA_MYCTO     2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG 456
               SCOP domains d1lqta2 A:2-108,A:325-456 Ferredoxin:NADP reductase FprA                                                   d1lqta1 A:109-324 Ferredoxin:NADP reductase FprA                                                                                                                                                                        d1lqta2 A:2-108,A:325-456 Ferredoxin:NADP reductase FprA                                                                             SCOP domains
               CATH domains -1lqtA01 A:3-46,A:63-108,A:325-454           1lqtA02         1lqtA01 A:3-46,A:63-108,A:325-454             1lqtA02 A:47-62,A:109-324  [code=3.50.50.60, no name defined]                                                                                                                                                           1lqtA01 A:3-46,A:63-108,A:325-454 NAD(P)-binding Rossmann-like Domain                                                             -- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhhhhhh....eeeeeee......hhhhhh.....hhhhhhhhhhhhhhh...eeeee........hhhhhhhhh.eeee.....ee............eeehhhhhhhhh.hhhhh.........eeeee..hhhhhhhhhhhhhhhhhhh....hhhhhhhhh.....eeeee...hhhhh..hhhhhhhhhhh..eeee.hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..-....eeeeee..eeeeeee......eeeeeeeeeee.....eeeeeeeeeeeee..eeee...ee.................ee..ee.....eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh......--hhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lqt A   2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADRE-RPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSF--DHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG 456
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391      |401       411       421       431       441       451     
                                                                                                                                                                                                                                                                                           259 |                                                                                                                                      398  |                                                       
                                                                                                                                                                                                                                                                                             261                                                                                                                                         401

Chain A from PDB  Type:PROTEIN  Length:452
 aligned with FPRA_MYCTU | P9WIQ3 from UniProtKB/Swiss-Prot  Length:456

    Alignment length:455
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451     
           FPRA_MYCTU     2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG 456
               SCOP domains d1lqta2 A:2-108,A:325-456 Ferredoxin:NADP reductase FprA                                                   d1lqta1 A:109-324 Ferredoxin:NADP reductase FprA                                                                                                                                                                        d1lqta2 A:2-108,A:325-456 Ferredoxin:NADP reductase FprA                                                                             SCOP domains
               CATH domains -1lqtA01 A:3-46,A:63-108,A:325-454           1lqtA02         1lqtA01 A:3-46,A:63-108,A:325-454             1lqtA02 A:47-62,A:109-324  [code=3.50.50.60, no name defined]                                                                                                                                                           1lqtA01 A:3-46,A:63-108,A:325-454 NAD(P)-binding Rossmann-like Domain                                                             -- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhhhhhh....eeeeeee......hhhhhh.....hhhhhhhhhhhhhhh...eeeee........hhhhhhhhh.eeee.....ee............eeehhhhhhhhh.hhhhh.........eeeee..hhhhhhhhhhhhhhhhhhh....hhhhhhhhh.....eeeee...hhhhh..hhhhhhhhhhh..eeee.hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..-....eeeeee..eeeeeee......eeeeeeeeeee.....eeeeeeeeeeeee..eeee...ee.................ee..ee.....eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh......--hhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lqt A   2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADRE-RPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSF--DHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG 456
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391      |401       411       421       431       441       451     
                                                                                                                                                                                                                                                                                           259 |                                                                                                                                      398  |                                                       
                                                                                                                                                                                                                                                                                             261                                                                                                                                         401

Chain B from PDB  Type:PROTEIN  Length:454
 aligned with FPRA_MYCTO | P9WIQ2 from UniProtKB/Swiss-Prot  Length:456

    Alignment length:455
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451     
           FPRA_MYCTO     2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG 456
               SCOP domains d1lqtb2 B:2-108,B:325-456 Ferredoxin:NADP reductase FprA                                                   d1lqtb1 B:109-324 Ferredoxin:NADP reductase FprA                                                                                                                                                                        d1lqtb2 B:2-108,B:325-456 Ferredoxin:NADP reductase FprA                                                                             SCOP domains
               CATH domains -1lqtB01 B:3-46,B:63-108,B:325-455           1lqtB02         1lqtB01 B:3-46,B:63-108,B:325-455             1lqtB02 B:47-62,B:109-324  [code=3.50.50.60, no name defined]                                                                                                                                                           1lqtB01 B:3-46,B:63-108,B:325-455 NAD(P)-binding Rossmann-like Domain                                                              - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhhhhhh....eeeeeee......hhhhhh......hhhhhhhhhhhhhh...eeeee........hhhhhhhhh.eeee.....ee............eeehhhhhhhhh.hhhhh.........eeeee..hhhhhhhhhhhhhhhhhhh....hhhhhhhhh.....eeeee...hhhhh..hhhhhhhhhhh..eeee.hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.......eeeeee..eeeeeee......eeeeeeeeeee.....eeeeeeeeeeeee..eeee...ee.................ee..ee.....eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.......-hhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lqt B   2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFP-DHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG 456
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451     
                                                                                                                                                                                                                                                                                                                                                                                                                                       399 |                                                       
                                                                                                                                                                                                                                                                                                                                                                                                                                         401

Chain B from PDB  Type:PROTEIN  Length:454
 aligned with FPRA_MYCTU | P9WIQ3 from UniProtKB/Swiss-Prot  Length:456

    Alignment length:455
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451     
           FPRA_MYCTU     2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG 456
               SCOP domains d1lqtb2 B:2-108,B:325-456 Ferredoxin:NADP reductase FprA                                                   d1lqtb1 B:109-324 Ferredoxin:NADP reductase FprA                                                                                                                                                                        d1lqtb2 B:2-108,B:325-456 Ferredoxin:NADP reductase FprA                                                                             SCOP domains
               CATH domains -1lqtB01 B:3-46,B:63-108,B:325-455           1lqtB02         1lqtB01 B:3-46,B:63-108,B:325-455             1lqtB02 B:47-62,B:109-324  [code=3.50.50.60, no name defined]                                                                                                                                                           1lqtB01 B:3-46,B:63-108,B:325-455 NAD(P)-binding Rossmann-like Domain                                                              - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhhhhhh....eeeeeee......hhhhhh......hhhhhhhhhhhhhh...eeeee........hhhhhhhhh.eeee.....ee............eeehhhhhhhhh.hhhhh.........eeeee..hhhhhhhhhhhhhhhhhhh....hhhhhhhhh.....eeeee...hhhhh..hhhhhhhhhhh..eeee.hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.......eeeeee..eeeeeee......eeeeeeeeeee.....eeeeeeeeeeeee..eeee...ee.................ee..ee.....eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.......-hhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lqt B   2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFP-DHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG 456
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451     
                                                                                                                                                                                                                                                                                                                                                                                                                                       399 |                                                       
                                                                                                                                                                                                                                                                                                                                                                                                                                         401

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)

Mycobacterium tuberculosis. Organism_taxid: 1773. (15)

1a	1lqtA01	A:3-46,A:63-108,A:325-454
1b	1lqtB01	B:3-46,B:63-108,B:325-455

Architecture: 3-Layer(bba) Sandwich (528)

Topology: FAD/NAD(P)-binding domain (373)

Homologous Superfamily: [code=3.50.50.60, no name defined] (373)

Mycobacterium tuberculosis. Organism_taxid: 1773. (3)

2a	1lqtA02	A:47-62,A:109-324
2b	1lqtB02	B:47-62,B:109-324

(no "Pfam Domain" information available for 1LQT)

Asymmetric Unit(hide GO term definitions)

Chain A,B (FPRA_MYCTO | P9WIQ2)

molecular function
	GO:0004324	ferredoxin-NADP+ reductase activity	Catalysis of the reaction: reduced ferredoxin + NADP+ = oxidized ferredoxin + NADPH + H+.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain A,B (FPRA_MYCTU | P9WIQ3)

molecular function
	GO:0070401	NADP+ binding	Interacting selectively and non-covalently with the oxidized form, NADP+, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.
	GO:0008860	ferredoxin-NAD+ reductase activity	Catalysis of the reaction: reduced ferredoxin + NAD+ = oxidized ferredoxin + NADH + H+.
	GO:0004324	ferredoxin-NADP+ reductase activity	Catalysis of the reaction: reduced ferredoxin + NADP+ = oxidized ferredoxin + NADPH + H+.
	GO:0050660	flavin adenine dinucleotide binding	Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005618	cell wall	The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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	Cis Peptide Bonds
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Access by PDB/NDB ID
	1lqt
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	FPRA_MYCTO \| P9WIQ2
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	FPRA_MYCTU \| P9WIQ3
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	FPRA_MYCTO \| P9WIQ2
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	FPRA_MYCTU \| P9WIQ3
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UniProtKB/Swiss-Prot
	FPRA_MYCTO \| P9WIQ2	:	1lqu 2c7g
	FPRA_MYCTU \| P9WIQ3	:	1lqu 2c7g

1lqu	1LQU CONTAINS THE SAME PROTEIN COMPLEXED WITH NADPH RELATED ID: RV3106 RELATED DB: TARGETDB

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 15)

Sites (15, 15)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 4)

CATH Domains (2, 4)

Pfam Domains (0, 0)

Gene Ontology (8, 11)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File