Chain A from PDB Type:PROTEIN Length:294
aligned with LDH_GEOSE | P00344 from UniProtKB/Swiss-Prot Length:317
Alignment length:317
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310
LDH_GEOSE 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR 317
SCOP domains d1ldba1 A:15-162 Lactate dehydrogenase d1ldba2 A:163-331 Lactate dehydrogenase SCOP domains
CATH domains 1ldbA01 A:15-162 NAD(P)-binding Rossmann-like Domain 1ldbA02 A:163-328 L-2-Hydroxyisocaproate Dehydrog enase, subunit A, domain 2 --- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeee.hhhhhhhhhhhhh....eeeeee..hhhhhhhhhhhhhhhh......eee.--.........eeeee....--------.hhhhhhhhhhhhhhhhhh.....eeee...hhhhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh....eeeeeee.......eeeeeeeeee.eee-------------.......................hhhhhhhhhhhhhhhhh...eeeeeeeee........eeeeeeeeee..eeeeee....hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L_LDH --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ldb A 15 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--DYDDCRDADLVVICAGAN--------DLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPI-------------DLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR 331
24 34 44 54 64 74 | |84 94 | - | 114 124 134 144 154 164 174 184 194 204 | - -| 234 244 254 264 274 284 294 304 314 324
79 82 99 108 211 225
Chain B from PDB Type:PROTEIN Length:294
aligned with LDH_GEOSE | P00344 from UniProtKB/Swiss-Prot Length:317
Alignment length:317
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310
LDH_GEOSE 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR 317
SCOP domains d1ldbb1 B:15-162 Lactate dehydrogenase d1ldbb2 B:163-331 Lactate dehydrogenase SCOP domains
CATH domains 1ldbB01 B:15-162 NAD(P)-binding Rossmann-like Domain 1ldbB02 B:163-328 L-2-Hydroxyisocaproate Dehydrog enase, subunit A, domain 2 --- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeee.hhhhhhhhhhhhh....eeeeee..hhhhhhhhhhhhhhhh......eee.--.........eeeee....--------.hhhhhhhhhhhhhhhhhh.....eeee...hhhhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh....eeeeeee.......eeeeeeeeee.eee-------------.......................hhhhhhhhhhhhhhhhh...eeeeeeeee........eeeeeeeeee..eeeeee....hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L_LDH --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ldb B 15 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--DYDDCRDADLVVICAGAN--------DLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPI-------------DLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR 331
24 34 44 54 64 74 | |84 94 | - | 114 124 134 144 154 164 174 184 194 204 | - -| 234 244 254 264 274 284 294 304 314 324
79 82 99 108 211 225
Chain C from PDB Type:PROTEIN Length:294
aligned with LDH_GEOSE | P00344 from UniProtKB/Swiss-Prot Length:317
Alignment length:317
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310
LDH_GEOSE 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR 317
SCOP domains d1ldbc1 C:15-162 Lactate dehydrogenase d1ldbc2 C:163-331 Lactate dehydrogenase SCOP domains
CATH domains 1ldbC01 C:15-162 NAD(P)-binding Rossmann-like Domain 1ldbC02 C:163-328 L-2-Hydroxyisocaproate Dehydrog enase, subunit A, domain 2 --- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeee.hhhhhhhhhhhhh....eeeeee..hhhhhhhhhhhhhhhh......eee.--.........eeeee....--------.hhhhhhhhhhhhhhhhhh.....eeee...hhhhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh....eeeeeee.......eeeeeeeeee.eee-------------.......................hhhhhhhhhhhhhhhhh...eeeeeeeee........eeeeeeeeee..eeeeee....hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L_LDH --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ldb C 15 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--DYDDCRDADLVVICAGAN--------DLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPI-------------DLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR 331
24 34 44 54 64 74 | |84 94 | - | 114 124 134 144 154 164 174 184 194 204 | - -| 234 244 254 264 274 284 294 304 314 324
79 82 99 108 211 225
Chain D from PDB Type:PROTEIN Length:294
aligned with LDH_GEOSE | P00344 from UniProtKB/Swiss-Prot Length:317
Alignment length:317
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310
LDH_GEOSE 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR 317
SCOP domains d1ldbd1 D:15-162 Lactate dehydrogenase d1ldbd2 D:163-331 Lactate dehydrogenase SCOP domains
CATH domains 1ldbD01 D:15-162 NAD(P)-binding Rossmann-like Domain 1ldbD02 D:163-328 L-2-Hydroxyisocaproate Dehydrog enase, subunit A, domain 2 --- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeee.hhhhhhhhhhhhh....eeeeee..hhhhhhhhhhhhhhhh......eee.--.........eeeee....--------.hhhhhhhhhhhhhhhhhh.....eeee...hhhhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh....eeeeeee.......eeeeeeeeee.eee-------------.......................hhhhhhhhhhhhhhhhh...eeeeeeeee........eeeeeeeeee..eeeeee....hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L_LDH --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ldb D 15 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--DYDDCRDADLVVICAGAN--------DLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPI-------------DLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR 331
24 34 44 54 64 74 | |84 94 | - | 114 124 134 144 154 164 174 184 194 204 | - -| 234 244 254 264 274 284 294 304 314 324
79 82 99 108 211 225
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |