Chain A from PDB Type:PROTEIN Length:632
aligned with EFG_THETH | P13551 from UniProtKB/Swiss-Prot Length:691
Alignment length:685
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474 484 494 504 514 524 534 544 554 564 574 584 594 604 614 624 634 644 654 664 674 684
EFG_THETH 5 VEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRQTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLIK 689
SCOP domains d1ktva2 A:5-282 Elongation factor G (EF-G), N-terminal (G) domain d1ktva1 A:283-399 Elongation factor G (EF-G), domain II -------- -------------------- ----------------------- d1ktva3 A:476-599 Elongation factor G (EF-G), domain IV d1ktva4 A:600-689 Elongation factor G (EF-G) SCOP domains
CATH domains 1ktvA01 A:5-286 P-loop containing n ucleotide triphosphate hydrolases ----------------1ktvA02 A:303-409 Translation factors ------- --------1ktvA03 A:43 3-483 1ktvA04 A:484-602 [code=3.30.230.10, no name defined] 1ktvA05 A:603-684 [code=3.30.70.240, no name defined] ----- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeee..........hhhhhhhhhhhh..----------------------------.eeeeee..eeeeee............hhhhhh....eeeee.....hhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhh....eee............eeee....eeee.........eee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...eeeee.hhhhh.hhhhhhhhhhhhh...........ee..eee...........eeeeeeeee.....eeeeeeeee.eee..eeee.hhhh.eeee..ee...........eee.....eee........eeee.........---------....ee..--------..hhhhhh............---..........hhhhhhh......-----....ee..eee....ee..eeee........eeeee.eeee......eeeee..........hhhhhhhhhhhhh............eeeee.eee......hhhhhhhhhhhhhhhhhhh...eeeeeeeeeeeee.....hhhhhhhhhh.....eeee....eeeeee.......hhhhhhhhhh.......eeeeeee..hhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------G_TR_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ktv A 5 VEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRI----------------------------AVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVIL---------IDVAIEPK--------SQALARLAEEDPTFRVSTHP---QTIISGMGELHLEIIVDRLKREF-----VGKPQVAYRETITKPVDVEGKFIRQTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLIK 689
14 24 34 | - - - | 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 | - | 414 | -| 434 444 | 454 464 | - | 484 494 504 514 524 534 544 554 564 574 584 594 604 614 624 634 644 654 664 674 684
39 68 399 409 416 425 444 448 470 476
Chain B from PDB Type:PROTEIN Length:632
aligned with EFG_THETH | P13551 from UniProtKB/Swiss-Prot Length:691
Alignment length:685
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474 484 494 504 514 524 534 544 554 564 574 584 594 604 614 624 634 644 654 664 674 684
EFG_THETH 5 VEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRQTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLIK 689
SCOP domains d1ktvb2 B:5-282 Elongation factor G (EF-G), N-terminal (G) domain d1ktvb1 B:283-399 Elongation factor G (EF-G), domain II -------- -------------------- ----------------------- d1ktvb3 B:476-599 Elongation factor G (EF-G), domain IV d1ktvb4 B:600-689 Elongation factor G (EF-G) SCOP domains
CATH domains 1ktvB01 B:5-286 P-loop containing n ucleotide triphosphate hydrolases ----------------1ktvB02 B:303-409 Translation factors ------- --------1ktvB03 B:43 3-483 1ktvB04 B:484-602 [code=3.30.230.10, no name defined] 1ktvB05 B:603-684 [code=3.30.70.240, no name defined] ----- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeee........hhhhhhhhhhhhhh..----------------------------.eeeeee..eeeeee............hhhhhh....eeeee.....hhhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhhh...eee............eeee....eeee.........eee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh..eeeee.hhhhh.hhhhhhhhhhhhh........eeeee..eeeeee........eee..eeee.....eeee..eee.eee..eeee.hhhh.eeee.eee...........eee.....eee.........eee.........---------....ee..--------..hhhhhh............---..........hhhhhhhh.....-----....ee..eee....ee..ee............eeeeeeee......eeeee..........hhhhhhhhhhhhh............eeeeeeeee......hhhhhhhhhhhhhhhhhhh...eeeeeeeeeeeee.....hhhhhhhhhh..eeeeeee....eeeeeeee.....hhhhhhhhhh.......eeeeeee..hhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------G_TR_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ktv B 5 VEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRI----------------------------AVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVIL---------IDVAIEPK--------SQALARLAEEDPTFRVSTHP---QTIISGMGELHLEIIVDRLKREF-----VGKPQVAYRETITKPVDVEGKFIRQTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLIK 689
14 24 34 | - - - | 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 | - | 414 | -| 434 444 | 454 464 | - | 484 494 504 514 524 534 544 554 564 574 584 594 604 614 624 634 644 654 664 674 684
39 68 399 409 416 425 444 448 470 476
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |