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1KTV
Biol. Unit 1
Info
Asym.Unit (189 KB)
Biol.Unit 1 (93 KB)
Biol.Unit 2 (93 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ELONGATION FACTOR G DIMER WITHOUT NUCLEOTIDE
Authors
:
M. Laurberg, O. Kristensen, X. D. Su, A. Liljas
Date
:
17 Jan 02 (Deposition) - 23 Dec 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Apo Form, Translation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Laurberg, O. Kristensen, X. D. Su, A. Liljas
A New Crystal Form Of Thermus Thermophilus Elongation Factor G Indicates Crystallographic Limitations Imposed On Molecular Flexibility
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: G_TR_1 (A:68-68)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_TR_1
PS00301
Translational (tr)-type guanine nucleotide-binding (G) domain signature.
EFG_THETH
53-68
1
A:68-68
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(4, 8)
Info
All SCOP Domains
1a: SCOP_d1ktva1 (A:283-399)
1b: SCOP_d1ktvb1 (B:283-399)
2a: SCOP_d1ktva4 (A:600-689)
2b: SCOP_d1ktvb4 (B:600-689)
3a: SCOP_d1ktva3 (A:476-599)
3b: SCOP_d1ktvb3 (B:476-599)
4a: SCOP_d1ktva2 (A:5-282)
4b: SCOP_d1ktvb2 (B:5-282)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Reductase/isomerase/elongation factor common domain
(381)
Superfamily
:
Translation proteins
(218)
Family
:
Elongation factors
(77)
Protein domain
:
Elongation factor G (EF-G), domain II
(11)
Thermus thermophilus [TaxId: 274]
(9)
1a
d1ktva1
A:283-399
1b
d1ktvb1
B:283-399
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
EF-G C-terminal domain-like
(33)
Family
:
EF-G/eEF-2 domains III and V
(24)
Protein domain
:
Elongation factor G (EF-G)
(11)
Thermus thermophilus [TaxId: 274]
(9)
2a
d1ktva4
A:600-689
2b
d1ktvb4
B:600-689
Fold
:
Ribosomal protein S5 domain 2-like
(306)
Superfamily
:
Ribosomal protein S5 domain 2-like
(306)
Family
:
Translational machinery components
(150)
Protein domain
:
Elongation factor G (EF-G), domain IV
(11)
Thermus thermophilus [TaxId: 274]
(9)
3a
d1ktva3
A:476-599
3b
d1ktvb3
B:476-599
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Elongation factor G (EF-G), N-terminal (G) domain
(11)
Thermus thermophilus [TaxId: 274]
(9)
4a
d1ktva2
A:5-282
4b
d1ktvb2
B:5-282
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CATH Domains
(5, 10)
Info
all CATH domains
1a: CATH_1ktvA05 (A:603-684)
1b: CATH_1ktvB05 (B:603-684)
2a: CATH_1ktvA03 (A:433-483)
2b: CATH_1ktvB03 (B:433-483)
3a: CATH_1ktvA04 (A:484-602)
3b: CATH_1ktvB04 (B:484-602)
4a: CATH_1ktvA01 (A:5-286)
4b: CATH_1ktvB01 (B:5-286)
5a: CATH_1ktvA02 (A:303-409)
5b: CATH_1ktvB02 (B:303-409)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.240, no name defined]
(21)
Thermus thermophilus. Organism_taxid: 274.
(1)
1a
1ktvA05
A:603-684
1b
1ktvB05
B:603-684
Homologous Superfamily
:
Elongation Factor G (Translational Gtpase), domain 3
(20)
Thermus thermophilus. Organism_taxid: 274.
(1)
2a
1ktvA03
A:433-483
2b
1ktvB03
B:433-483
Topology
:
Ribosomal Protein S5; domain 2
(189)
Homologous Superfamily
:
[code=3.30.230.10, no name defined]
(170)
Thermus thermophilus. Organism_taxid: 274.
(2)
3a
1ktvA04
A:484-602
3b
1ktvB04
B:484-602
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Thermus thermophilus. Organism_taxid: 274.
(12)
4a
1ktvA01
A:5-286
4b
1ktvB01
B:5-286
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
Translation factors
(223)
Thermus thermophilus. Organism_taxid: 274.
(1)
5a
1ktvA02
A:303-409
5b
1ktvB02
B:303-409
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (189 KB)
Header - Asym.Unit
Biol.Unit 1 (93 KB)
Header - Biol.Unit 1
Biol.Unit 2 (93 KB)
Header - Biol.Unit 2
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