Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit - manually
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit - manually
Asym./Biol. Unit - manually  (Jmol Viewer)
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  TYPE 1 INSULIN-LIKE GROWTH FACTOR RECEPTOR (DOMAINS 1-3)
 
Authors :  T. P. J. Garrett, N. M. Mckern, M. Lou, M. J. Frenkel, J. D. Bentley, G. O. L T. C. Elleman, L. J. Cosgrove, C. W. Ward
Date :  28 Sep 98  (Deposition) - 27 Sep 99  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Hormone Receptor, Insulin Receptor Family (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. P. Garrett, N. M. Mckern, M. Lou, M. J. Frenkel, J. D. Bentley, G. O. Lovrecz, T. C. Elleman, L. J. Cosgrove, C. W. Ward
Crystal Structure Of The First Three Domains Of The Type-1 Insulin-Like Growth Factor Receptor.
Nature V. 394 395 1998
PubMed-ID: 9690478  |  Reference-DOI: 10.1038/28668
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - INSULIN-LIKE GROWTH FACTOR RECEPTOR 1
    Cellular LocationCYTOPLASMIC MEMBRANE
    ChainsA
    EC Number2.7.10.1
    EngineeredYES
    Expression SystemCRICETULUS GRISEUS
    Expression System Cellular LocationSECRETED
    Expression System Cell LineLEC8
    Expression System CommonCHINESE HAMSTER
    Expression System PlasmidPEE14/IGF-1R/462
    Expression System Taxid10029
    FragmentUNP RESIDUES 31-492
    OrganPLACENTA
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsLARGE SCALE CELL CULTURE IN A CELLGEN PLUS BIOREACTOR

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 18)

Asymmetric/Biological Unit (5, 18)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2FUC2Ligand/IonALPHA-L-FUCOSE
3MAN1Ligand/IonALPHA-D-MANNOSE
4NAG6Ligand/IonN-ACETYL-D-GLUCOSAMINE
5SO48Ligand/IonSULFATE ION

(-) Sites  (18, 18)

Asymmetric Unit (18, 18)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:20 , ASN A:21BINDING SITE FOR RESIDUE NAG A 479A
02AC2SOFTWAREASN A:105 , SER A:128 , LEU A:129 , ILE A:130 , LEU A:131 , ASP A:132 , ARG A:222 , FUC A:481B , NAG A:482C , HOH A:532BINDING SITE FOR RESIDUE NAG A 480A
03AC3SOFTWAREARG A:222 , HIS A:223 , NAG A:480A , NAG A:482CBINDING SITE FOR RESIDUE FUC A 481B
04AC4SOFTWARENAG A:480A , FUC A:481BBINDING SITE FOR RESIDUE NAG A 482C
05AC5SOFTWAREASN A:214BINDING SITE FOR RESIDUE NAG A 483A
06AC6SOFTWAREVAL A:140 , ASN A:284 , TYR A:290 , FUC A:485B , NAG A:486CBINDING SITE FOR RESIDUE NAG A 484A
07AC7SOFTWAREILE A:292 , NAG A:484A , NAG A:486CBINDING SITE FOR RESIDUE FUC A 485B
08AC8SOFTWAREGLY A:141 , ASN A:142 , NAG A:484A , FUC A:485B , BMA A:487DBINDING SITE FOR RESIDUE NAG A 486C
09AC9SOFTWARENAG A:486C , MAN A:488EBINDING SITE FOR RESIDUE BMA A 487D
10BC1SOFTWAREGLU A:147 , BMA A:487DBINDING SITE FOR RESIDUE MAN A 488E
11BC2SOFTWARETHR A:177 , ASN A:179 , ARG A:180BINDING SITE FOR RESIDUE SO4 A 493
12BC3SOFTWAREARG A:245 , PHE A:251BINDING SITE FOR RESIDUE SO4 A 494
13BC4SOFTWAREARG A:104 , ASN A:105 , LEU A:206 , GLY A:207 , ARG A:222BINDING SITE FOR RESIDUE SO4 A 495
14BC5SOFTWARELYS A:80 , LEU A:81 , ARG A:108BINDING SITE FOR RESIDUE SO4 A 496
15BC6SOFTWAREARG A:44 , PRO A:46 , ASN A:72BINDING SITE FOR RESIDUE SO4 A 497
16BC7SOFTWAREASN A:237 , TYR A:239 , ARG A:249BINDING SITE FOR RESIDUE SO4 A 498
17BC8SOFTWARETRP A:79 , TYR A:224 , ARG A:240BINDING SITE FOR RESIDUE SO4 A 499
18BC9SOFTWAREARG A:59 , LYS A:359 , ARG A:361BINDING SITE FOR RESIDUE SO4 A 500

(-) SS Bonds  (15, 15)

Asymmetric/Biological Unit
No.Residues
1A:3 -A:22
2A:120 -A:148
3A:152 -A:175
4A:162 -A:181
5A:185 -A:194
6A:189 -A:200
7A:201 -A:209
8A:205 -A:218
9A:221 -A:230
10A:234 -A:246
11A:252 -A:273
12A:277 -A:291
13A:294 -A:298
14A:302 -A:323
15A:425 -A:458

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly A:4 -Pro A:5

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (6, 6)

Asymmetric/Biological Unit (6, 6)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_041424V105LIGF1R_HUMANUnclassified  ---AV75L
2UniProtVAR_034891R138QIGF1R_HUMANDisease (IGF1RES)121912426AR108Q
3UniProtVAR_034892K145NIGF1R_HUMANDisease (IGF1RES)121912427AK115N
4UniProtVAR_076247N359YIGF1R_HUMANDisease (IGF1RES)  ---AN329Y
5UniProtVAR_018855V388MIGF1R_HUMANPolymorphism45445894AV358M
6UniProtVAR_034893R437HIGF1R_HUMANPolymorphism34516635AR407H

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 1)

Asymmetric/Biological Unit (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FN3PS50853 Fibronectin type-III domain profile.IGF1R_HUMAN491-609
610-708
735-828
834-927
  1A:467-477
-
-
-

(-) Exons   (7, 7)

Asymmetric/Biological Unit (7, 7)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000002680351aENSE00001618814chr15:99192200-99192904705IGF1R_HUMAN1-32321A:1-22
1.2ENST000002680352ENSE00000943091chr15:99250791-99251336546IGF1R_HUMAN32-2141831A:2-184183
1.3ENST000002680353ENSE00001320137chr15:99434554-99434866313IGF1R_HUMAN214-3181051A:184-288105
1.4ENST000002680354ENSE00001129109chr15:99439986-99440134149IGF1R_HUMAN318-368511A:288-33851
1.5ENST000002680355ENSE00001301974chr15:99442706-99442850145IGF1R_HUMAN368-416491A:338-38649
1.6ENST000002680356ENSE00001129094chr15:99451914-99452128215IGF1R_HUMAN416-488731A:386-45873
1.7ENST000002680357ENSE00001129087chr15:99454544-99454670127IGF1R_HUMAN488-530431A:458-478 (gaps)34
1.8ENST000002680358ENSE00001129080chr15:99456273-99456511239IGF1R_HUMAN530-610810--
1.9ENST000002680359ENSE00001129073chr15:99459193-99459360168IGF1R_HUMAN610-666570--
1.10ENST0000026803510ENSE00001129062chr15:99459901-99460105205IGF1R_HUMAN666-734690--
1.11ENST0000026803511ENSE00001129055chr15:99465377-99465660284IGF1R_HUMAN734-829960--
1.12ENST0000026803512ENSE00001129044chr15:99467105-99467241137IGF1R_HUMAN829-874460--
1.13ENST0000026803513ENSE00001311160chr15:99467754-99467913160IGF1R_HUMAN875-928540--
1.14aENST0000026803514aENSE00001318374chr15:99472787-99472889103IGF1R_HUMAN928-962350--
1.15ENST0000026803515ENSE00001297944chr15:99473464-9947353471IGF1R_HUMAN962-986250--
1.16ENST0000026803516ENSE00001129013chr15:99478053-99478282230IGF1R_HUMAN986-1062770--
1.17ENST0000026803517ENSE00001129006chr15:99478545-99478655111IGF1R_HUMAN1063-1099370--
1.18ENST0000026803518ENSE00001319679chr15:99482430-99482589160IGF1R_HUMAN1100-1153540--
1.19ENST0000026803519ENSE00001597369chr15:99486152-99486281130IGF1R_HUMAN1153-1196440--
1.20ENST0000026803520ENSE00001128979chr15:99491803-99491937135IGF1R_HUMAN1196-1241460--
1.21bENST0000026803521bENSE00001316091chr15:99500290-995077597470IGF1R_HUMAN1241-13671270--

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:471
 aligned with IGF1R_HUMAN | P08069 from UniProtKB/Swiss-Prot  Length:1367

    Alignment length:491
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520 
          IGF1R_HUMAN    31 EICGPGIDIRNDYQQLKRLENCTVIEGYLHILLISKAEDYRSYRFPKLTVITEYLLLFRVAGLESLGDLFPNLTVIRGWKLFYNYALVIFEMTNLKDIGLYNLRNITRGAIRIEKNADLCYLSTVDWSLILDAVSNNYIVGNKPPKECGDLCPGTMEEKPMCEKTTINNEYNYRCWTTNRCQKMCPSTCGKRACTENNECCHPECLGSCSAPDNDTACVACRHYYYAGVCVPACPPNTYRFEGWRCVDRDFCANILSAESSDSEGFVIHDGECMQECPSGFIRNGSQSMYCIPCEGPCPKVCEEEKKTKTIDSVTSAQMLQGCTIFKGNLLINIRRGNNIASELENFMGLIEVVTGYVKIRHSHALVSLSFLKNLRLILGEEQLEGNYSFYVLDNQNLQQLWDWDHRNLTIKAGKMYFAFNPKLCVSEIYRMEEVTGTKGRQSKGDINTRNNGERASCESDVLHFTSTTTSKNRIIITWHRYRPPDYRDLI 521
               SCOP domains d1igra1 A:1-149 Type 1 insulin-like growth factor receptor extracellular domain                                                                      d1igra3 A:150-299 Type 1 insulin-like growth factor receptor Cys-rich domain                                                                          d1igra2 A:300-478 Type 1 insulin-like growth factor receptor extracellular domain                                                                                                                SCOP domains
               CATH domains 1igrA01 A:1-184 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'. Chain A, domain 1                                                                                                  ---------------------------------------1igrA02 A:224-299                                                           1igrA03 A:300-478 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'. Chain A, domain 1                                                                                                         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...eeee.hhhhhhhhh...ee...eeeeeee..............ee...eeeeeee...hhhhh.....ee........eeeeee..............ee...eeeee...........hhhhhh.hhhhheee...hhhhhh..............eee....eee............hhhhh..............eeeee........eeee..ee....ee.......eee...eeehhhhhhh............eee..eee......eee.......eee.......eeeeeeeeeee..hhhhh......eeeeeeee...........hhhhhh...ee...eeee...............ee.........eeeeee................ee...eeeee.....hhhhhhhhhhhhh......................------------......hhh--------hhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------L--------------------------------Q------N---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y----------------------------M------------------------------------------------H------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FN3  PDB: A:467-477             PROSITE
           Transcript 1 (1) 1.-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.3  PDB: A:184-288 UniProt: 214-318                                                                -------------------------------------------------Exon 1.5  PDB: A:338-386 UniProt: 368-416        -----------------------------------------------------------------------Exon 1.7  PDB: A:458-478 (gaps)    Transcript 1 (1)
           Transcript 1 (2) -Exon 1.2  PDB: A:2-184 UniProt: 32-214                                                                                                                                                 -------------------------------------------------------------------------------------------------------Exon 1.4  PDB: A:288-338 UniProt: 318-368          -----------------------------------------------Exon 1.6  PDB: A:386-458 UniProt: 416-488                                --------------------------------- Transcript 1 (2)
                 1igr A   1 EICGPGIDIRNDYQQLKRLENCTVIEGYLHILLISKAEDYRSYRFPKLTVITEYLLLFRVAGLESLGDLFPNLTVIRGWKLFYNYALVIFEMTNLKDIGLYNLRNITRGAIRIEKNADLCYLSTVDWSLILDAVSNNYIVGNKPPKECGDLCPGTMEEKPMCEKTTINNEYNYRCWTTNRCQKMCPSTCGKRACTENNECCHPECLGSCSAPDNDTACVACRHYYYAGVCVPACPPNTYRFEGWRCVDRDFCANILSAESSDSEGFVIHDGECMQECPSGFIRNGSQSMYCIPCEGPCPKVCEEEKKTKTIDSVTSAQMLQGCTIFKGNLLINIRRGNNIASELENFMGLIEVVTGYVKIRHSHALVSLSFLKNLRLILGEEQLEGNYSFYVLDNQNLQQLWDWDHRNLTIKAGKMYFAFNPKLCVSEIYRMEEVTGTKGRQSKGDINTRNNGERASCE------------KEQKLISEE--------DLN 478
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450        |-         - |     475       477 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    459          467     475      476  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 3)

Asymmetric/Biological Unit

(-) CATH Domains  (2, 3)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1IGR)

(-) Gene Ontology  (41, 41)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (IGF1R_HUMAN | P08069)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0043559    insulin binding    Interacting selectively and non-covalently with insulin, a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.
    GO:0005158    insulin receptor binding    Interacting selectively and non-covalently with the insulin receptor.
    GO:0043560    insulin receptor substrate binding    Interacting selectively and non-covalently with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex.
    GO:0031994    insulin-like growth factor I binding    Interacting selectively and non-covalently with insulin-like growth factor I.
    GO:0005520    insulin-like growth factor binding    Interacting selectively and non-covalently with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it.
    GO:0005010    insulin-like growth factor-activated receptor activity    Combining with insulin-like growth factor and transmitting the signal across the plasma membrane to initiate a change in cell activity.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0043548    phosphatidylinositol 3-kinase binding    Interacting selectively and non-covalently with a phosphatidylinositol 3-kinase, any enzyme that catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004672    protein kinase activity    Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
    GO:0004713    protein tyrosine kinase activity    Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0004714    transmembrane receptor protein tyrosine kinase activity    Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.
biological process
    GO:0006955    immune response    Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
    GO:0051389    inactivation of MAPKK activity    Any process that terminates the activity of the active enzyme MAP kinase kinase (MAPKK).
    GO:0008286    insulin receptor signaling pathway    The series of molecular signals generated as a consequence of the insulin receptor binding to insulin.
    GO:0048009    insulin-like growth factor receptor signaling pathway    The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands.
    GO:0043066    negative regulation of apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
    GO:0038083    peptidyl-tyrosine autophosphorylation    The phosphorylation by a protein of one or more of its own tyrosine amino acid residues, or a tyrosine residue on an identical protein.
    GO:0014065    phosphatidylinositol 3-kinase signaling    A series of reactions within the signal-receiving cell, mediated by the intracellular phosphatidylinositol 3-kinase (PI3K). Many cell surface receptor linked signaling pathways signal through PI3K to regulate numerous cellular functions.
    GO:0048015    phosphatidylinositol-mediated signaling    A series of molecular signals in which a cell uses a phosphatidylinositol-mediated signaling to convert a signal into a response. Phosphatidylinositols include phosphatidylinositol (PtdIns) and its phosphorylated derivatives.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0045740    positive regulation of DNA replication    Any process that activates or increases the frequency, rate or extent of DNA replication.
    GO:0030335    positive regulation of cell migration    Any process that activates or increases the frequency, rate or extent of cell migration.
    GO:0008284    positive regulation of cell proliferation    Any process that activates or increases the rate or extent of cell proliferation.
    GO:0046777    protein autophosphorylation    The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation).
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
    GO:0051262    protein tetramerization    The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits.
    GO:0046328    regulation of JNK cascade    Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
    GO:0007169    transmembrane receptor protein tyrosine kinase signaling pathway    A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with regulation of a downstream cellular process, e.g. transcription.
cellular component
    GO:0035867    alphav-beta3 integrin-IGF-1-IGF1R complex    A protein complex that consists of an alphav-beta3 integrin complex bound to insulin-like growth factor-1 (IGF-1) and type I insulin-like growth factor receptor (IGF1R). IGF1R is a heterotetramer that consists of two alpha-subunits and two beta-subunits.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0043231    intracellular membrane-bounded organelle    Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043235    receptor complex    Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    BMA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FUC  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MAN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NAG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Gly A:4 - Pro A:5   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1igr
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  IGF1R_HUMAN | P08069
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.7.10.1
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  270450
    Disease InformationOMIM
 
Access by GenAge ID
  0015
    Age Related InformationGenAge
  0110
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  IGF1R_HUMAN | P08069
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        IGF1R_HUMAN | P080691jqh 1k3a 1m7n 1p4o 2oj9 2zm3 3d94 3f5p 3i81 3lvp 3lw0 3nw5 3nw6 3nw7 3o23 3qqu 4d2r 4xss 5fxq 5fxr 5fxs 5hzn

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1IGR)