Chain A from PDB Type:PROTEIN Length:464
aligned with SYP_THET8 | Q5SM28 from UniProtKB/Swiss-Prot Length:477
Alignment length:473
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
SYP_THET8 5 KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY 477
SCOP domains d1hc7a2 A:5-276 Prolyl-tRNA synthetase (ProRS) d1hc7a1 A:277-403 Prolyl-tRNA synthetase (ProRS) domain d1hc7a3 A:404-477 C-terminal domain of ProRS SCOP domains
CATH domains 1hc7A01 A:5-282 Bira Bifunctional Protein; Domain 2 1hc7A02 A:283-386 [code=3.40.50.800, no name defined] -----------------1hc7A03 A:404-477 [code=3.30.110.30, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhh..eee......eeehhhhhhhhhhhhhhhhhhhhhh..ee.....eee....---------.....eeeeee...eeeeeeee...hhhhhhhhhhhhh..hhhh.eeeeeeeeee.............eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...........eeeeeeee.....eeeeeeeeeeehhhhhhh..eee.....eee.eeeeeeeehhhhhhhhhhhh...............eeeee.....hhhhhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhh...eeeeehhhhhhh.eeeeee......eee..hhhhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhh...eeee....hhhhhhhhhhhhh.eeeeee......................eeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1hc7 A 5 KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFL---------FSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY 477
14 24 34 44 54 64 74 | - | 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
77 87
Chain B from PDB Type:PROTEIN Length:464
aligned with SYP_THET8 | Q5SM28 from UniProtKB/Swiss-Prot Length:477
Alignment length:473
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
SYP_THET8 5 KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY 477
SCOP domains d1hc7b2 B:5-276 Prolyl-tRNA synthetase (ProRS) d1hc7b1 B:277-403 Prolyl-tRNA synthetase (ProRS) domain d1hc7b3 B:404-477 C-terminal domain of ProRS SCOP domains
CATH domains 1hc7B01 B:5-282 Bira Bifunctional Protein; Domain 2 1hc7B02 B:283-386 [code=3.40.50.800, no name defined] -----------------1hc7B03 B:404-476 [code=3.30.110.30, no name defined] - CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhh..eee......eeehhhhhhhhhhhhhhhhhhhhh...ee.....eee.hhh---------.....eeeeee..eeeeeeeee...hhhhhhhhhhhhh..hhhh.eeeeeeeeee.............eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...........eeeeeeee.....eeeeeeeeeeehhhhhhhh.eee.....eee.eeeeeeeehhhhhhhhhhhh...............eeeee..hhhhhhhhhhhhhhhhhhhhh....eee......hhhhhhhhhhhh...eeeeehhhhhhh.eeeeee....eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhh...eeee....hhhhhhhhhhhhh.eeeeee......................eeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1hc7 B 5 KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFL---------FSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY 477
14 24 34 44 54 64 74 | - | 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
77 87
Chain C from PDB Type:PROTEIN Length:464
aligned with SYP_THET8 | Q5SM28 from UniProtKB/Swiss-Prot Length:477
Alignment length:473
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
SYP_THET8 5 KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY 477
SCOP domains d1hc7c2 C:5-276 Prolyl-tRNA synthetase (ProRS) d1hc7c1 C:277-403 Prolyl-tRNA synthetase (ProRS) domain d1hc7c3 C:404-477 C-terminal domain of ProRS SCOP domains
CATH domains 1hc7C01 C:5-282 Bira Bifunctional Protein; Domain 2 1hc7C02 C:283-386 [code=3.40.50.800, no name defined] -----------------1hc7C03 C:404-476 [code=3.30.110.30, no name defined] - CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhh..eee......eeehhhhhhhhhhhhhhhhhhhhhh..ee.....eee.hhh---------......eeeee..eeeeeeeee...hhhhhhhhhhhhh..hhhh.eeeeeeeeee.............eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...........eeeeeeee.....eeeeeeeeeeehhhhhhhh.eee.....eee.eeeeeeeehhhhhhhhhhhh...............eeeee.....hhhhhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhh...eeeeehhhhhhh.eeeeee....eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhh...eeee....hhhhhhhhhhhhh.eeeeee......................eeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1hc7 C 5 KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFL---------FSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY 477
14 24 34 44 54 64 74 | - | 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
77 87
Chain D from PDB Type:PROTEIN Length:464
aligned with SYP_THET8 | Q5SM28 from UniProtKB/Swiss-Prot Length:477
Alignment length:473
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
SYP_THET8 5 KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY 477
SCOP domains d1hc7d2 D:5-276 Prolyl-tRNA synthetase (ProRS) d1hc7d1 D:277-403 Prolyl-tRNA synthetase (ProRS) domain d1hc7d3 D:404-477 C-terminal domain of ProRS SCOP domains
CATH domains 1hc7D01 D:5-282 Bira Bifunctional Protein; Domain 2 1hc7D02 D:283-386 [code=3.40.50.800, no name defined] -----------------1hc7D03 D:404-476 [code=3.30.110.30, no name defined] - CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhh..eee......eeehhhhhhhhhhhhhhhhhhhhhh..ee.....eee.hhh---------.....eeeeee..eeeeeeeee...hhhhhhhhhhhhh..hhhh.eeeeeeeeee.............eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhh.....eeee...........eeeeeeee.....eeeeeeeeeeehhhhhhhh.eee.....eee.eeeeeeeehhhhhhhhhhhh....ee.........eeeee.....hhhhhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhee..eeeeehhhhhhh.eeeeee....eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhh...eeee....hhhhhhhhhhhhh.eeeeee......................eeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1hc7 D 5 KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFL---------FSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY 477
14 24 34 44 54 64 74 | - | 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
77 87
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |