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(-) Description

Title :  SULFATE RESPIRATION IN DESULFOVIBRIO VULGARIS HILDENBOROUGH: STRUCTURE OF THE 16-HEME CYTOCHROME C HMCA AT 2.5 A RESOLUTION AND A VIEW OF ITS ROLE IN TRANSMEMBRANE ELECTRON TRANSFER
 
Authors :  P. M. Matias, A. V. Coelho, F. M. A. Valente, D. Placido, J. Legall, A. V. Xavier, I. A. C. Pereira, M. A. Carrondo
Date :  01 Aug 02  (Deposition) - 02 Oct 02  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.51
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Electron Transport, High Molecular Mass Cytochrome, Sulfate Respiration, Hydrogen Cycle, Transmembrane Redox Complex, Energy Conservation, Proton Gradient, Tetra-Heme, C3-Like Domain (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. M. Matias, A. V. Coelho, F. M. A. Valente, D. Placido, J. Legall, A. V. Xavier, I. A. C. Pereira, M. A. Carrondo
Sulfate Respiration In Desulfovibrio Vulgaris Hildenborough: Structure Of The 16-Heme Cytochrome C Hmca At 2. 5 A Resolution And A View Of Its Role In Transmembrane Electron Transfer
J. Biol. Chem. V. 277 47907 2002
PubMed-ID: 12356749  |  Reference-DOI: 10.1074/JBC.M207465200

(-) Compounds

Molecule 1 - HIGH-MOLECULAR-WEIGHT CYTOCHROME C
    Chains: A, B, C, D
    Organism Scientific: DESULFOVIBRIO VULGARIS
    Organism Taxid: 882
    Strain: HILDENBOROUGH
    Synonym: CYTOCHROME CC3, HMCA

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 64)

Asymmetric Unit (1, 64)
No.NameCountTypeFull Name
1HEC64Ligand/IonHEME C
Biological Unit 1 (1, 16)
No.NameCountTypeFull Name
1HEC16Ligand/IonHEME C
Biological Unit 2 (1, 16)
No.NameCountTypeFull Name
1HEC16Ligand/IonHEME C
Biological Unit 3 (1, 16)
No.NameCountTypeFull Name
1HEC16Ligand/IonHEME C
Biological Unit 4 (1, 16)
No.NameCountTypeFull Name
1HEC16Ligand/IonHEME C

(-) Sites  (64, 64)

Asymmetric Unit (64, 64)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREILE A:46 , PHE A:64 , HIS A:66 , CYS A:80 , CYS A:83 , HIS A:84 , LEU A:93 , LYS A:94 , PHE A:95 , ARG A:97 , TYR A:110 , HIS A:222 , ILE A:226 , HEC A:1102 , HEC A:1107 , HOH A:2060BINDING SITE FOR RESIDUE HEC A1101
02AC2SOFTWAREVAL A:62 , PHE A:64 , ARG A:65 , GLN A:68 , HIS A:69 , ALA A:72 , VAL A:73 , PHE A:95 , CYS A:114 , CYS A:117 , HIS A:118 , LEU A:121 , LYS A:127 , THR A:128 , GLY A:129 , PRO A:130 , HEC A:1101 , HOH A:2115 , HOH A:2116 , HOH A:2117BINDING SITE FOR RESIDUE HEC A1102
03AC3SOFTWAREILE A:48 , GLY A:49 , ALA A:50 , MET A:51 , LEU A:57 , ASP A:58 , LEU A:59 , VAL A:62 , TYR A:110 , HIS A:111 , HIS A:118 , GLN A:131 , ASP A:132 , CYS A:135 , CYS A:138 , HIS A:139 , HOH A:2118 , GLN C:517BINDING SITE FOR RESIDUE HEC A1103
04AC4SOFTWAREGLY A:153 , PHE A:154 , HIS A:159 , HIS A:162 , ASN A:177 , CYS A:178 , CYS A:181 , HIS A:182 , GLU A:199 , SER A:201 , ARG A:203 , LEU A:265 , ASP A:266 , ASP A:307 , CYS A:308 , ARG A:309 , ILE A:316 , HEC A:1106BINDING SITE FOR RESIDUE HEC A1104
05AC5SOFTWARECYS A:181 , HIS A:183 , TYR A:185 , SER A:201 , CYS A:202 , CYS A:205 , HIS A:206 , LYS A:213 , ARG A:214 , PRO A:215 , ALA A:220 , ALA A:224BINDING SITE FOR RESIDUE HEC A1105
06AC6SOFTWAREPHE A:154 , LEU A:158 , ARG A:161 , HIS A:162 , SER A:165 , ALA A:224 , CYS A:225 , CYS A:228 , HIS A:229 , GLU A:238 , GLY A:240 , PRO A:241 , PHE A:256 , LYS A:257 , HEC A:1104 , HEC A:1107 , HOH A:2040BINDING SITE FOR RESIDUE HEC A1106
07AC7SOFTWAREILE A:46 , HIS A:66 , TRP A:149 , GLU A:151 , ILE A:152 , LEU A:217 , ALA A:221 , HIS A:222 , ILE A:226 , VAL A:242 , ASN A:243 , CYS A:244 , CYS A:247 , HIS A:248 , HEC A:1101 , HEC A:1106BINDING SITE FOR RESIDUE HEC A1107
08AC8SOFTWAREGLN A:269 , PRO A:270 , ILE A:275 , HIS A:298 , ALA A:305 , ASP A:307 , CYS A:308 , CYS A:311 , HIS A:312 , ILE A:316 , ASP A:317 , THR A:318 , CYS A:319 , THR A:320 , ARG A:406 , HEC A:1110BINDING SITE FOR RESIDUE HEC A1108
09AC9SOFTWARECYS A:311 , HIS A:312 , HIS A:313 , THR A:318 , CYS A:319 , CYS A:322 , HIS A:323 , ASP A:330 , SER A:331 , LYS A:338 , ALA A:339 , SER A:345 , ARG A:347BINDING SITE FOR RESIDUE HEC A1109
10BC1SOFTWAREILE A:275 , VAL A:294 , PHE A:296 , HIS A:301 , MET A:346 , ARG A:347 , CYS A:349 , CYS A:352 , HIS A:353 , ARG A:356 , ARG A:417 , LYS A:464 , THR A:468 , HEC A:1108 , HEC A:1112BINDING SITE FOR RESIDUE HEC A1110
11BC2SOFTWAREARG A:356 , VAL A:357 , THR A:361 , CYS A:362 , CYS A:365 , HIS A:366 , ILE A:369 , PRO A:371 , THR A:372 , GLN A:377 , ILE A:460 , ASP A:463 , PHE A:469 , HIS A:470 , THR A:475 , LEU A:476 , GLN A:478 , GLY A:479 , HOH A:2120BINDING SITE FOR RESIDUE HEC A1111
12BC3SOFTWAREILE A:275 , PRO A:277 , THR A:290 , MET A:291 , LYS A:292 , PRO A:293 , VAL A:294 , LEU A:336 , GLU A:337 , MET A:340 , HIS A:341 , CYS A:349 , CYS A:378 , CYS A:381 , HIS A:382 , HEC A:1110 , GLU C:261BINDING SITE FOR RESIDUE HEC A1112
13BC4SOFTWARETHR A:423 , ILE A:429 , HIS A:449 , CYS A:477 , CYS A:480 , HIS A:481 , SER A:487 , LEU A:488 , PRO A:490 , LYS A:492 , CYS A:493 , TYR A:515 , HEC A:1115 , HOH A:2121BINDING SITE FOR RESIDUE HEC A1113
14BC5SOFTWAREPHE A:368 , LYS A:370 , CYS A:480 , HIS A:482 , ASN A:483 , PRO A:491 , CYS A:493 , CYS A:496 , HIS A:497 , ALA A:514 , GLN A:517 , GLN A:518 , HOH A:2123BINDING SITE FOR RESIDUE HEC A1114
15BC6SOFTWAREILE A:435 , PHE A:447 , ILE A:452 , THR A:455 , GLN A:518 , CYS A:519 , CYS A:522 , HIS A:523 , LYS A:530 , PRO A:531 , HEC A:1113 , HEC A:1116BINDING SITE FOR RESIDUE HEC A1115
16BC7SOFTWAREILE A:435 , GLY A:436 , ILE A:438 , ALA A:439 , LYS A:440 , GLU A:441 , TYR A:442 , TYR A:515 , HIS A:516 , CYS A:519 , MET A:520 , ALA A:532 , ALA A:535 , CYS A:536 , CYS A:539 , HIS A:540 , HEC A:1115 , ALA C:122 , LYS C:123 , GLN C:131BINDING SITE FOR RESIDUE HEC A1116
17BC8SOFTWAREPHE B:64 , HIS B:66 , THR B:70 , ASP B:79 , CYS B:80 , CYS B:83 , HIS B:84 , LEU B:93 , LYS B:94 , PHE B:95 , ARG B:97 , TYR B:110 , HIS B:222 , MET B:230 , HEC B:1102 , HEC B:1107BINDING SITE FOR RESIDUE HEC B1101
18BC9SOFTWAREVAL B:62 , PHE B:64 , ARG B:65 , GLN B:68 , HIS B:69 , ALA B:72 , PHE B:95 , ASN B:113 , CYS B:114 , CYS B:117 , HIS B:118 , LEU B:121 , LYS B:127 , GLY B:129 , PRO B:130 , HEC B:1101BINDING SITE FOR RESIDUE HEC B1102
19CC1SOFTWAREILE B:48 , GLY B:49 , ALA B:50 , MET B:51 , LEU B:57 , ASP B:58 , LEU B:59 , VAL B:62 , LYS B:107 , TYR B:110 , HIS B:111 , GLN B:131 , ASP B:132 , GLU B:134 , CYS B:135 , CYS B:138 , HIS B:139 , HOH B:2110 , GLN D:517BINDING SITE FOR RESIDUE HEC B1103
20CC2SOFTWAREGLY B:153 , PHE B:154 , HIS B:159 , HIS B:162 , ASN B:177 , CYS B:178 , CYS B:181 , HIS B:182 , GLU B:199 , SER B:201 , CYS B:202 , ARG B:203 , LEU B:265 , ASP B:307 , CYS B:308 , ARG B:309 , ILE B:316 , HEC B:1105 , HEC B:1106BINDING SITE FOR RESIDUE HEC B1104
21CC3SOFTWAREHIS B:183 , LEU B:192 , SER B:201 , CYS B:202 , CYS B:205 , HIS B:206 , LYS B:213 , ARG B:214 , ALA B:220 , HEC B:1104BINDING SITE FOR RESIDUE HEC B1105
22CC4SOFTWAREPHE B:154 , ARG B:161 , HIS B:162 , SER B:165 , ALA B:167 , CYS B:181 , ALA B:224 , CYS B:225 , CYS B:228 , HIS B:229 , GLU B:238 , THR B:239 , GLY B:240 , PRO B:241 , PHE B:256 , LYS B:257 , HEC B:1104 , HEC B:1107 , HOH B:2112 , HOH B:2113 , HOH B:2114 , HOH B:2115 , HOH B:2116 , HOH B:2117BINDING SITE FOR RESIDUE HEC B1106
23CC5SOFTWAREILE B:46 , HIS B:66 , TRP B:149 , GLU B:151 , ILE B:152 , ASP B:218 , ALA B:221 , HIS B:222 , ILE B:226 , PRO B:241 , VAL B:242 , ASN B:243 , CYS B:244 , CYS B:247 , HIS B:248 , HEC B:1101 , HEC B:1106BINDING SITE FOR RESIDUE HEC B1107
24CC6SOFTWAREGLN B:269 , PRO B:270 , ILE B:275 , PHE B:296 , HIS B:298 , ALA B:305 , ASP B:307 , CYS B:308 , CYS B:311 , HIS B:312 , ILE B:316 , THR B:318 , CYS B:319 , THR B:320 , ARG B:406 , HEC B:1110 , HOH B:2118BINDING SITE FOR RESIDUE HEC B1108
25CC7SOFTWARELYS A:166 , CYS B:311 , HIS B:312 , HIS B:313 , VAL B:314 , ARG B:315 , THR B:318 , CYS B:319 , CYS B:322 , HIS B:323 , ASP B:330 , SER B:331 , ALA B:339 , SER B:345 , ARG B:347 , HOH B:2078BINDING SITE FOR RESIDUE HEC B1109
26CC8SOFTWAREPHE B:296 , ASP B:297 , HIS B:301 , MET B:346 , ARG B:347 , SER B:348 , CYS B:349 , CYS B:352 , HIS B:353 , ARG B:417 , ASP B:463 , LYS B:464 , LEU B:465 , THR B:468 , HEC B:1108 , HEC B:1112BINDING SITE FOR RESIDUE HEC B1110
27CC9SOFTWAREVAL B:357 , THR B:361 , CYS B:362 , CYS B:365 , HIS B:366 , THR B:372 , GLN B:377 , ILE B:460 , ASP B:463 , PHE B:469 , HIS B:470 , THR B:475 , LEU B:476 , GLN B:478 , GLY B:479 , HOH B:2119 , HOH B:2120 , HOH B:2121BINDING SITE FOR RESIDUE HEC B1111
28DC1SOFTWAREARG A:260 , GLU A:261 , ILE B:275 , LEU B:276 , PRO B:277 , THR B:290 , MET B:291 , LYS B:292 , VAL B:294 , MET B:340 , HIS B:341 , CYS B:349 , CYS B:378 , CYS B:381 , HIS B:382 , HEC B:1110 , HOH B:2122 , HOH B:2123BINDING SITE FOR RESIDUE HEC B1112
29DC2SOFTWARETHR B:423 , ILE B:429 , ILE B:435 , PHE B:447 , HIS B:449 , VAL B:453 , CYS B:477 , CYS B:480 , HIS B:481 , SER B:487 , LEU B:488 , PRO B:490 , LYS B:492 , CYS B:493 , TYR B:515 , HEC B:1115 , HOH B:2124 , HOH B:2125BINDING SITE FOR RESIDUE HEC B1113
30DC3SOFTWAREPHE B:368 , LYS B:370 , CYS B:480 , HIS B:482 , ASN B:483 , LYS B:492 , CYS B:493 , CYS B:496 , HIS B:497 , ASP B:507 , ALA B:514 , GLN B:517 , GLN B:518BINDING SITE FOR RESIDUE HEC B1114
31DC4SOFTWAREPHE B:447 , ILE B:452 , THR B:455 , GLN B:518 , CYS B:519 , CYS B:522 , HIS B:523 , MET B:526 , LYS B:530 , CYS B:539 , HEC B:1113BINDING SITE FOR RESIDUE HEC B1115
32DC5SOFTWAREILE B:435 , GLY B:436 , SER B:437 , ILE B:438 , ALA B:439 , LYS B:440 , GLU B:441 , TYR B:442 , SER B:445 , LYS B:512 , TYR B:515 , HIS B:516 , CYS B:519 , ALA B:532 , ASN B:533 , CYS B:536 , CYS B:539 , HIS B:540 , LYS D:123 , GLN D:131BINDING SITE FOR RESIDUE HEC B1116
33DC6SOFTWAREILE C:46 , HIS C:66 , THR C:70 , CYS C:80 , CYS C:83 , HIS C:84 , LEU C:93 , LYS C:94 , PHE C:95 , ARG C:97 , TYR C:110 , ASP C:218 , HIS C:222 , HEC C:1102 , HEC C:1107BINDING SITE FOR RESIDUE HEC C1101
34DC7SOFTWAREILE C:48 , VAL C:62 , PHE C:64 , ARG C:65 , GLN C:68 , HIS C:69 , ALA C:72 , CYS C:114 , CYS C:117 , HIS C:118 , LEU C:121 , LYS C:127 , GLY C:129 , PRO C:130 , HEC C:1101BINDING SITE FOR RESIDUE HEC C1102
35DC8SOFTWAREGLN A:517 , ILE C:48 , GLY C:49 , ALA C:50 , MET C:51 , LEU C:57 , ASP C:58 , LEU C:59 , VAL C:62 , LYS C:107 , TYR C:110 , HIS C:111 , ILE C:115 , HIS C:118 , GLN C:131 , ASP C:132 , CYS C:135 , CYS C:138 , HIS C:139 , HOH C:2125 , HOH C:2126BINDING SITE FOR RESIDUE HEC C1103
36DC9SOFTWAREGLY C:153 , PHE C:154 , HIS C:159 , HIS C:162 , ASN C:177 , CYS C:178 , CYS C:181 , HIS C:182 , GLU C:199 , SER C:201 , CYS C:202 , ARG C:203 , ASP C:266 , ASP C:307 , CYS C:308 , ARG C:309 , HEC C:1105 , HEC C:1106 , HOH C:2128BINDING SITE FOR RESIDUE HEC C1104
37EC1SOFTWAREHIS C:183 , TYR C:185 , LEU C:192 , ASP C:200 , SER C:201 , CYS C:202 , CYS C:205 , HIS C:206 , LYS C:213 , ARG C:214 , PRO C:215 , ALA C:220 , THR C:223 , ALA C:224 , HEC C:1104 , HOH C:2045 , HOH C:2129BINDING SITE FOR RESIDUE HEC C1105
38EC2SOFTWAREPHE C:154 , LEU C:158 , ARG C:161 , HIS C:162 , SER C:165 , ILE C:168 , CYS C:181 , ALA C:224 , CYS C:225 , CYS C:228 , HIS C:229 , GLU C:238 , THR C:239 , GLY C:240 , PRO C:241 , PHE C:256 , LYS C:257 , HEC C:1104 , HEC C:1107 , HOH C:2041 , HOH C:2131BINDING SITE FOR RESIDUE HEC C1106
39EC3SOFTWAREILE C:46 , HIS C:66 , TRP C:149 , GLU C:151 , ILE C:152 , ALA C:221 , HIS C:222 , PRO C:241 , VAL C:242 , ASN C:243 , CYS C:244 , CYS C:247 , HIS C:248 , HEC C:1101 , HEC C:1106BINDING SITE FOR RESIDUE HEC C1107
40EC4SOFTWAREGLN C:269 , PRO C:270 , ILE C:275 , PHE C:296 , HIS C:298 , ALA C:305 , ASP C:307 , CYS C:308 , CYS C:311 , HIS C:312 , ILE C:316 , THR C:318 , CYS C:319 , THR C:320 , ARG C:406 , HEC C:1110 , HOH C:2132BINDING SITE FOR RESIDUE HEC C1108
41EC5SOFTWARECYS C:311 , HIS C:312 , HIS C:313 , VAL C:314 , ARG C:315 , THR C:318 , CYS C:319 , CYS C:322 , HIS C:323 , ASP C:330 , LYS C:338 , ALA C:339 , GLN C:342 , SER C:345 , ARG C:347 , HOH C:2133BINDING SITE FOR RESIDUE HEC C1109
42EC6SOFTWAREPHE C:296 , HIS C:301 , LYS C:304 , CYS C:311 , MET C:346 , ARG C:347 , SER C:348 , CYS C:349 , CYS C:352 , HIS C:353 , ARG C:356 , ARG C:417 , LYS C:464 , LEU C:465 , THR C:468 , HEC C:1108BINDING SITE FOR RESIDUE HEC C1110
43EC7SOFTWAREVAL C:357 , GLN C:359 , THR C:361 , CYS C:362 , CYS C:365 , HIS C:366 , ILE C:369 , PRO C:371 , THR C:372 , GLN C:377 , LEU C:456 , ILE C:460 , ASP C:463 , LEU C:465 , PHE C:469 , HIS C:470 , THR C:475 , LEU C:476 , GLN C:478 , GLY C:479 , HOH C:2085 , HOH C:2134BINDING SITE FOR RESIDUE HEC C1111
44EC8SOFTWAREGLU B:261 , ILE C:275 , PRO C:277 , GLY C:289 , THR C:290 , MET C:291 , LYS C:292 , VAL C:294 , LEU C:336 , GLU C:337 , MET C:340 , HIS C:341 , CYS C:349 , CYS C:378 , CYS C:381 , HIS C:382 , HOH C:2072BINDING SITE FOR RESIDUE HEC C1112
45EC9SOFTWARETHR C:423 , ILE C:429 , PRO C:430 , ILE C:435 , PHE C:447 , HIS C:449 , ILE C:452 , VAL C:453 , CYS C:477 , CYS C:480 , HIS C:481 , SER C:487 , LEU C:488 , PRO C:490 , LYS C:492 , CYS C:493 , TYR C:515 , GLN C:518 , HEC C:1115BINDING SITE FOR RESIDUE HEC C1113
46FC1SOFTWAREPHE C:368 , LYS C:370 , HIS C:482 , ASN C:483 , PRO C:491 , CYS C:493 , SER C:495 , CYS C:496 , HIS C:497 , ARG C:508 , ALA C:514 , GLN C:517 , GLN C:518 , HOH C:2136BINDING SITE FOR RESIDUE HEC C1114
47FC2SOFTWARESER C:445 , PHE C:447 , PRO C:448 , ILE C:452 , THR C:455 , GLN C:518 , CYS C:519 , CYS C:522 , HIS C:523 , MET C:526 , LYS C:530 , PRO C:531 , CYS C:539 , HEC C:1113 , HEC C:1116BINDING SITE FOR RESIDUE HEC C1115
48FC3SOFTWARETHR A:119 , GLN A:131 , ILE C:435 , GLY C:436 , SER C:437 , ILE C:438 , ALA C:439 , LYS C:440 , GLU C:441 , TYR C:442 , LYS C:512 , TYR C:515 , HIS C:516 , CYS C:519 , MET C:520 , HIS C:523 , ALA C:532 , ASN C:533 , CYS C:536 , CYS C:539 , HIS C:540 , HEC C:1115 , HOH C:2107BINDING SITE FOR RESIDUE HEC C1116
49FC4SOFTWAREILE D:46 , HIS D:66 , THR D:70 , CYS D:80 , CYS D:83 , HIS D:84 , LEU D:93 , LYS D:94 , PHE D:95 , ARG D:97 , TYR D:110 , HIS D:222 , ILE D:226 , MET D:230 , HEC D:1102 , HOH D:2108BINDING SITE FOR RESIDUE HEC D1101
50FC5SOFTWAREVAL D:62 , PHE D:64 , ARG D:65 , GLN D:68 , HIS D:69 , ALA D:72 , VAL D:73 , PHE D:95 , CYS D:114 , CYS D:117 , HIS D:118 , LEU D:121 , LYS D:127 , GLY D:129 , PRO D:130 , HEC D:1101BINDING SITE FOR RESIDUE HEC D1102
51FC6SOFTWAREGLN B:517 , ILE D:48 , GLY D:49 , ALA D:50 , MET D:51 , LEU D:57 , ASP D:58 , LEU D:59 , TYR D:110 , HIS D:111 , HIS D:118 , GLN D:131 , ASP D:132 , CYS D:135 , CYS D:138 , HIS D:139BINDING SITE FOR RESIDUE HEC D1103
52FC7SOFTWAREGLY D:153 , PHE D:154 , HIS D:159 , HIS D:162 , VAL D:163 , ASN D:177 , CYS D:178 , CYS D:181 , HIS D:182 , GLU D:199 , SER D:201 , ARG D:203 , LEU D:265 , ASP D:266 , ASP D:307 , CYS D:308 , ARG D:309 , ILE D:316 , HEC D:1105 , HEC D:1106 , HEC D:1108BINDING SITE FOR RESIDUE HEC D1104
53FC8SOFTWAREHIS D:183 , TYR D:185 , LEU D:192 , ASP D:200 , SER D:201 , CYS D:202 , CYS D:205 , HIS D:206 , LYS D:213 , ARG D:214 , PRO D:215 , ALA D:220 , ALA D:224 , HEC D:1104 , HOH D:2110BINDING SITE FOR RESIDUE HEC D1105
54FC9SOFTWAREPHE D:154 , ARG D:161 , HIS D:162 , SER D:165 , CYS D:225 , CYS D:228 , HIS D:229 , GLU D:238 , THR D:239 , GLY D:240 , PRO D:241 , PHE D:256 , HEC D:1104 , HEC D:1107 , HOH D:2032 , HOH D:2111BINDING SITE FOR RESIDUE HEC D1106
55GC1SOFTWAREILE D:46 , HIS D:66 , TRP D:149 , GLU D:151 , ILE D:152 , ASP D:218 , ALA D:221 , HIS D:222 , CYS D:225 , ILE D:226 , VAL D:242 , ASN D:243 , CYS D:244 , CYS D:247 , HIS D:248 , HEC D:1106BINDING SITE FOR RESIDUE HEC D1107
56GC2SOFTWAREARG D:267 , GLN D:269 , ILE D:275 , HIS D:298 , ALA D:305 , ASP D:307 , CYS D:308 , CYS D:311 , HIS D:312 , ILE D:316 , THR D:318 , CYS D:319 , THR D:320 , ARG D:406 , HEC D:1104 , HEC D:1110 , HOH D:2065BINDING SITE FOR RESIDUE HEC D1108
57GC3SOFTWARECYS D:311 , HIS D:312 , HIS D:313 , THR D:318 , CYS D:319 , CYS D:322 , HIS D:323 , ASP D:330 , SER D:331 , LYS D:338 , ALA D:339 , GLN D:342 , SER D:345 , ARG D:347BINDING SITE FOR RESIDUE HEC D1109
58GC4SOFTWAREILE D:275 , PHE D:296 , HIS D:301 , LYS D:304 , CYS D:311 , MET D:346 , ARG D:347 , SER D:348 , CYS D:349 , CYS D:352 , HIS D:353 , ARG D:356 , ARG D:417 , ASP D:463 , LYS D:464 , LEU D:465 , THR D:468 , HEC D:1108 , HEC D:1112BINDING SITE FOR RESIDUE HEC D1110
59GC5SOFTWAREVAL D:357 , CYS D:362 , CYS D:365 , HIS D:366 , ILE D:369 , PRO D:371 , THR D:372 , GLN D:377 , ASP D:463 , PHE D:469 , HIS D:470 , THR D:475 , LEU D:476 , GLN D:478 , GLY D:479BINDING SITE FOR RESIDUE HEC D1111
60GC6SOFTWAREGLU D:261 , ILE D:275 , PRO D:277 , GLY D:289 , THR D:290 , MET D:291 , LYS D:292 , PRO D:293 , VAL D:294 , LEU D:336 , MET D:340 , HIS D:341 , CYS D:349 , CYS D:378 , CYS D:381 , HIS D:382 , HEC D:1110BINDING SITE FOR RESIDUE HEC D1112
61GC7SOFTWAREILE D:429 , ILE D:435 , PHE D:447 , HIS D:449 , VAL D:453 , CYS D:477 , CYS D:480 , HIS D:481 , SER D:487 , LEU D:488 , PRO D:490 , LYS D:492 , CYS D:493 , TYR D:515 , HEC D:1115BINDING SITE FOR RESIDUE HEC D1113
62GC8SOFTWAREPHE D:368 , LYS D:370 , CYS D:480 , HIS D:482 , ASN D:483 , CYS D:493 , CYS D:496 , HIS D:497 , ASP D:507 , ALA D:514 , GLN D:517 , GLN D:518BINDING SITE FOR RESIDUE HEC D1114
63GC9SOFTWARESER D:445 , PHE D:447 , LYS D:451 , ILE D:452 , THR D:455 , CYS D:480 , GLN D:518 , CYS D:519 , CYS D:522 , HIS D:523 , LYS D:530 , HEC D:1113BINDING SITE FOR RESIDUE HEC D1115
64HC1SOFTWAREGLN B:131 , ILE D:435 , GLY D:436 , SER D:437 , ILE D:438 , ALA D:439 , LYS D:440 , GLU D:441 , TYR D:442 , LYS D:512 , TYR D:515 , HIS D:516 , CYS D:519 , MET D:520 , ALA D:532 , ASN D:533 , CYS D:536 , CYS D:539 , HIS D:540 , HOH D:2112BINDING SITE FOR RESIDUE HEC D1116

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1H29)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1H29)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1H29)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1MULTIHEME_CYTCPS51008 Multiheme cytochrome c family profile.HMWC_DESVH75-545
 
 
 		  4A:75-543
B:75-541
C:75-544
D:75-542
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1MULTIHEME_CYTCPS51008 Multiheme cytochrome c family profile.HMWC_DESVH75-545
 
 
 		  1A:75-543
-
-
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1MULTIHEME_CYTCPS51008 Multiheme cytochrome c family profile.HMWC_DESVH75-545
 
 
 		  1-
B:75-541
-
-
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1MULTIHEME_CYTCPS51008 Multiheme cytochrome c family profile.HMWC_DESVH75-545
 
 
 		  1-
-
C:75-544
-
Biological Unit 4 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1MULTIHEME_CYTCPS51008 Multiheme cytochrome c family profile.HMWC_DESVH75-545
 
 
 		  1-
-
-
D:75-542

(-) Exons   (0, 0)

(no "Exon" information available for 1H29)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:501
 aligned with HMWC_DESVH | P24092 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:506
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537      
           HMWC_DESVH    38 PGEKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDGKMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGKPFDADRGDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHKER 543
               SCOP domains d1h29a_ A: 16-heme cytochrome c HmcA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 1h29A01 A:38-148 Cytochrome C3                                                                                 1h29A02 A:149-258 Cytochrome C3                                                                               -----------1h29A03 A:270-420 Cytochrome C3                                                                                                                        1h29A04 A:421-543 Cytochrome C3                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee..eeeehhhhhhh......eeeehhhhhhhhhh...hhhhh..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhh.........hhhhhh......ee.......hhhhhhhhhh............hhhhh..eee....eee.......hhhhh..........hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh.................eeee........hhhhh.....eeeehhhhhhhh.............................hhhhhhhh.....hhhhhhhhhh.hhhhhhhhh......hhhhhhhhh...................hhhhhhhhhhhhhh.........hhhhh...eee.........eeehhhhhhhhhhhhhh.hhhhhhhh...hhhhhhh...........hhhhh...-----.....hhhhhhhhhhhhhhhhh........hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------MULTIHEME_CYTC  PDB: A:75-543 UniProt: 75-545                                                                                                                                                                                                                                                                                                                                                                                                                                         PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1h29 A  38 PGEKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDGKMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGK-----RGDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHKER 543
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497 |     507       517       527       537      
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       499   505                                      


Chain B from PDB  Type:PROTEIN  Length:499
 aligned with HMWC_DESVH | P24092 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:504
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537    
           HMWC_DESVH    38 PGEKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDGKMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGKPFDADRGDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHK 541
               SCOP domains d1h29b_ B: 16-heme cytochrome c HmcA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 1h29B01 B:38-148 Cytochrome C3                                                                                 1h29B02 B:149-258 Cytochrome C3                                                                               -----------1h29B03 B:270-420 Cytochrome C3                                                                                                                        1h29B04 B:421-541 Cytochrome C3                                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee..eeeehhhhhhh......eeeehhhhhhhhhhh..hhhhh..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhh.........hhhhhh......ee.......hhhhhhhhhh............hhhhh..eee....eee.......hhhhhh.........hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.................eeee..................eeeehhhhhhhh......................hhhhh..hhhhhhhh.....hhhhhhhhhh.hhhhhhhhh......hhhhhhhhh.......hhhhhhh.....hhhhhhhhhhhhhhhh.......hhhhh...eee.........eeehhhhhhhhhhhhhh.hhhhhhhh...hhhhhh............hhhhh...-----.....hhhhhhhhhhhhhhhhhh.......hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------MULTIHEME_CYTC  PDB: B:75-541 UniProt: 75-545                                                                                                                                                                                                                                                                                                                                                                                                                                       PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1h29 B  38 PGEKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDGKMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGK-----RGDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHK 541
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497 |     507       517       527       537    
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       499   505                                    


Chain C from PDB  Type:PROTEIN  Length:501
 aligned with HMWC_DESVH | P24092 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:507
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       
           HMWC_DESVH    38 PGEKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDGKMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGKPFDADRGDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHKERA 544
               SCOP domains d1h29c_ C: 16-heme cytochrome c HmcA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 1h29C01 C:38-148 Cytochrome C3                                                                                 1h29C02 C:149-258 Cytochrome C3                                                                               -----------1h29C03 C:270-420 Cytochrome C3                                                                                                                        1h29C04 C:421-544 Cytochrome C3                                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee..eeeehhhhhh.......eeeehhhhhhhhhhh..hhhhh..................hhhhhhhhhhhhhhhhhhhhhhh.........hhhhhh......ee.......hhhhhhhhhh............hhhhh..eee....eee.......hhhhh..........hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh.................eeee........hhhhh.....eeeehhhhhhhh.............................hhhhhhhh.....hhhhhhhhhh.hhhhhhhhh......hhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhh.......hhhhh...eee.........eeehhhhhhhhhhhhhh.hhhhhhhh....hhhhhh...........hhhhh...------....hhhhhhhhhhhhhhhhh........hhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------MULTIHEME_CYTC  PDB: C:75-544 UniProt: 75-545                                                                                                                                                                                                                                                                                                                                                                                                                                          PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1h29 C  38 PGEKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDGKMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGK------GDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHKERA 544
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497 |     507       517       527       537       
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       499    506                                      


Chain D from PDB  Type:PROTEIN  Length:492
 aligned with HMWC_DESVH | P24092 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:505
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537     
           HMWC_DESVH    38 PGEKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDGKMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGKPFDADRGDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHKE 542
               SCOP domains d1h29d_ D: 16-heme cytochrome c HmcA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1h29D01 D:38-148 Cytochrome C3                                                                                 1h29D02 D:149-258 Cytochrome C3                                                                               -----------1h29D03 D:270   -420 Cytochrome C3                                                                                                                     1h29D04 D:421-542 Cytochrome C3                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee..eeeehhhhhh.......eeeehhhhhhhhhhh..hhhhh..................hhhhhhhhhhhhhhhhhhhhhhh.........hhhhhh......ee.......hhhhhhhhhh............hhhhh..eee....eee.......hhhhh..........hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh.................eeee.......---........eeeehhhhhhhh......................hhhhh..hhhhhhhh.....hhhhhhhhhh................hhhhhh..............----....hhhhhhhhhhhhhhhh.......hhhhh...eee.........eeehhhhhhhhhhhhhh.hhhhhhhh...hhhhhh....................------....hhhhhhhhhhhhhhhhh........hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------MULTIHEME_CYTC  PDB: D:75-542 UniProt: 75-545                                                                                                                                                                                                                                                                                                                                                                                                                                        PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1h29 D  38 PGEKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDGKMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKD---EMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQV----LLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGK------GDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHKE 542
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277    |  287       297       307       317       327       337       347       357       367       377       387     |   -|      407       417       427       437       447       457       467       477       487       497 |     507       517       527       537     
                                                                                                                                                                                                                                                                              282 286                                                                                                        393  398                                                                                                  499    506
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 16)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: Alpha-Beta Complex (3881)
(-)
Topology: Cytochrome C3 (62)
(-)
Homologous Superfamily: Cytochrome C3 (62)
(-)
Desulfovibrio vulgaris. Organism_taxid: 882. Strain: hildenborough (3)
1a1h29A02A:149-258
1b1h29D01D:38-148
1c1h29B04B:421-541
1d1h29D04D:421-542
1e1h29A04A:421-543
1f1h29C04C:421-544
1g1h29D03D:270-420
1h1h29A03A:270-420
1i1h29B03B:270-420
1j1h29C03C:270-420
1k1h29B02B:149-258
1l1h29C02C:149-258
1m1h29D02D:149-258
1n1h29A01A:38-148
1o1h29B01B:38-148
1p1h29C01C:38-148

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1H29)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (HMWC_DESVH | P24092)
molecular function
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0042597    periplasmic space    The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

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  1h29
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  HMWC_DESVH | P24092
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HMWC_DESVH | P24092: 1gws 2cvc

(-) Related Entries Specified in the PDB File

1gws HEXADECAHEME HIGH MOLECULAR WEIGHT CYTOCHROME HMC FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH