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1DXX
Biol. Unit 2
Info
Asym.Unit (156 KB)
Biol.Unit 1 (79 KB)
Biol.Unit 2 (78 KB)
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(1)
Title
:
N-TERMINAL ACTIN-BINDING DOMAIN OF HUMAN DYSTROPHIN
Authors
:
F. L. Norwood, A. J. Sutherland-Smith, N. H. Keep, J. Kendrick-Jones
Date
:
20 Jan 00 (Deposition) - 16 May 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Structural Protein, Dystrophin, Muscular Dystrophy, Calponin Homology Domain, Actin-Binding, Utrophin
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. L. Norwood, A. J. Sutherland-Smith, N. H. Keep, J. Kendrick-Jones
The Structure Of The N-Terminal Actin-Binding Domain Of Human Dystrophin And How Mutations In This Domain May Cause Duchenne Or Becker Muscular Dystrophy
Structure V. 8 481 2000
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(8, 16)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_023537 (K18N, chain C/D, )
2: VAR_005147 (L54R, chain C/D, )
3: VAR_065764 (W118R, chain C/D, )
4: VAR_005148 (Q133P, chain C/D, )
5: VAR_023538 (D165V, chain C/D, )
6: VAR_005149 (A168D, chain C/D, )
7: VAR_023539 (A171P, chain C/D, )
8: VAR_005150 (Y231N, chain C/D, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_023537
K
18
N
DMD_HUMAN
Disease (CMD3B)
---
C/D
K
18
N
2
UniProt
VAR_005147
L
54
R
DMD_HUMAN
Disease (DMD)
---
C/D
L
54
R
3
UniProt
VAR_065764
W
118
R
DMD_HUMAN
Unclassified
---
C/D
W
118
R
4
UniProt
VAR_005148
Q
133
P
DMD_HUMAN
Polymorphism
1800256
C/D
Q
133
P
5
UniProt
VAR_023538
D
165
V
DMD_HUMAN
Unclassified
---
C/D
D
165
V
6
UniProt
VAR_005149
A
168
D
DMD_HUMAN
Disease (BMD)
---
C/D
A
168
D
7
UniProt
VAR_023539
A
171
P
DMD_HUMAN
Disease (BMD)
---
C/D
A
171
P
8
UniProt
VAR_005150
Y
231
N
DMD_HUMAN
Disease (BMD)
---
C/D
Y
231
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 8)
Info
All PROSITE Patterns/Profiles
1: CH (C:15-119,C:134-237,D:134-237)
2: ACTININ_1 (C:17-26,D:17-26)
3: ACTININ_2 (C:91-115,D:91-115)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CH
PS50021
Calponin homology domain profile.
DMD_HUMAN
15-119
134-237
4
-
-
C:15-119
D:15-119
-
-
C:134-237
D:134-237
2
ACTININ_1
PS00019
Actinin-type actin-binding domain signature 1.
DMD_HUMAN
17-26
2
-
-
C:17-26
D:17-26
3
ACTININ_2
PS00020
Actinin-type actin-binding domain signature 2.
DMD_HUMAN
91-115
2
-
-
C:91-115
D:91-115
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1dxxa1 (A:9-119)
1b: SCOP_d1dxxa2 (A:120-246)
1c: SCOP_d1dxxb1 (B:9-119)
1d: SCOP_d1dxxb2 (B:120-246)
1e: SCOP_d1dxxc1 (C:9-119)
1f: SCOP_d1dxxc2 (C:120-246)
1g: SCOP_d1dxxd1 (D:9-119)
1h: SCOP_d1dxxd2 (D:120-246)
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Protein Domains
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(
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Class
:
All alpha proteins
(14657)
Fold
:
CH domain-like
(55)
Superfamily
:
Calponin-homology domain, CH-domain
(53)
Family
:
Calponin-homology domain, CH-domain
(28)
Protein domain
:
Dystrophin
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1dxxa1
A:9-119
1b
d1dxxa2
A:120-246
1c
d1dxxb1
B:9-119
1d
d1dxxb2
B:120-246
1e
d1dxxc1
C:9-119
1f
d1dxxc2
C:120-246
1g
d1dxxd1
D:9-119
1h
d1dxxd2
D:120-246
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1dxxA01 (A:9-121)
1b: CATH_1dxxB01 (B:9-121)
1c: CATH_1dxxC01 (C:9-121)
1d: CATH_1dxxD01 (D:9-121)
1e: CATH_1dxxA02 (A:122-246)
1f: CATH_1dxxB02 (B:122-246)
1g: CATH_1dxxC02 (C:122-246)
1h: CATH_1dxxD02 (D:122-246)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Actin-binding Protein, T-fimbrin; domain 1
(51)
Homologous Superfamily
:
Actin-binding Protein, T-fimbrin; domain 1
(51)
Human (Homo sapiens)
(39)
1a
1dxxA01
A:9-121
1b
1dxxB01
B:9-121
1c
1dxxC01
C:9-121
1d
1dxxD01
D:9-121
1e
1dxxA02
A:122-246
1f
1dxxB02
B:122-246
1g
1dxxC02
C:122-246
1h
1dxxD02
D:122-246
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Asymmetric Unit 1
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Asym.Unit (156 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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