Chain A from PDB Type:PROTEIN Length:373
aligned with ARRS_BOVIN | P08168 from UniProtKB/Swiss-Prot Length:404
Alignment length:384
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389
ARRS_BOVIN 10 HVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESFQDENFVFEEFARQNLKDAGEYKE 393
SCOP domains d1cf1a1 A:10-182 Arrestin d1cf1a2 A:183-393 Arrestin SCOP domains
CATH domains 1cf1A01 A:10-182 [code=2.60.40.840, no name defined] ----1cf1A02 A:187-375 [code=2.60.40.640, no name defined] ------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eeeeee.....eeeee...eeee.......eeeeeee........eeeeeeeeeeee...........eeee.eeeeeeee..........hhhhhhhhhh...eeeeee.........eee..........eeeeeeeeeeee.hhhhh........eeeeeeeeee...........eeeeeeeee..eeeeeeeee...eee....eeeeeeeee.....eeeeeeeeeeeeee......eeeeeeeeeee.......eeeeeeeee...hhh...............................hhhh.eeeeeeeeeeeee.........eeeeeeeeeeee......-----------..eeee.............. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -------------------------------------------------------ARRESTINS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.2 Exon 1.3 PDB: A:26-4--------------Exon 1.5 PDB: A:61-125 UniProt: 61-125 Exon 1.6 Exon 1.7 PDB: A:146-171 -------------------------------------------------------------------------Exon 1.10 PDB: A:245-269---------------------------------------------Exon 1.12 PDB: A:315-341 -------Exon 1.14 ----Exon 1.17 Transcript 1 (1)
Transcript 1 (2) ------------------------------------Exon 1.4 -------------------------------------------------------------------------------------------------------------Exon 1.8 PDB: A:171-216 UniProt: 171-216 Exon 1.9 PDB: A:217-245 -----------------------Exon 1.11 PDB: A:269-315 UniProt: 269-315 -------------------------Exon 1.13------------------1.15 -------------------- Transcript 1 (2)
1cf1 A 10 HVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPED-----------NFVFEEFARQNLKDAGEYKE 393
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 | - | 379 389
362 374
Chain B from PDB Type:PROTEIN Length:360
aligned with ARRS_BOVIN | P08168 from UniProtKB/Swiss-Prot Length:404
Alignment length:377
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378
ARRS_BOVIN 9 NHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESFQDENFVFEEFARQNL 385
SCOP domains d1cf1b1 B:9-182 Arrestin d1cf1b2 B:183-385 Arrestin SCOP domains
CATH domains -1cf1B01 B:10-182 [code=2.60.40.840, no name defined] --1cf1B02 B:185-375 [code=2.60.40.640, no name defined] ---------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee.....eeeee...eeeee......eeeeeee.hhhh...eeeeeeeeeeee..--------.eeee.eeeeeeee..........hhhhhhhhhh...eeeeee.........eee..........eeeeeeeeeeee...........hhheeeeeeeeeee.........eeeeee........eeeeeee...eee....eeeeeeeee.....eeeeeeeeeeeeee......eeeeeeeeeee.......eeeeeeeee...hhh...............................hhhh.eeeeeeeeeeeee...........eeeeeeeeee......---------...eeeee...... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------ARRESTINS -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.2 Exon 1.3 PDB: B:26-4--------------Exon 1.5 PDB: B:61-125 (gaps) UniProt: 61-125 Exon 1.6 Exon 1.7 PDB: B:146-171 -------------------------------------------------------------------------Exon 1.10 PDB: B:245-269---------------------------------------------Exon 1.12 PDB: B:315-341 -------Exon 1.14 ----Exon 1.17 Transcript 1 (1)
Transcript 1 (2) -------------------------------------Exon 1.4 -------------------------------------------------------------------------------------------------------------Exon 1.8 PDB: B:171-216 UniProt: 171-216 Exon 1.9 PDB: B:217-245 -----------------------Exon 1.11 PDB: B:269-315 UniProt: 269-315 -------------------------Exon 1.13------------------1.15 ------------ Transcript 1 (2)
1cf1 B 9 NHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQ--------SFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPED---------DENFVFEEFARQNL 385
18 28 38 48 58 68| 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 | - | 378
69 78 362 372
Chain C from PDB Type:PROTEIN Length:380
aligned with ARRS_BOVIN | P08168 from UniProtKB/Swiss-Prot Length:404
Alignment length:387
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386
ARRS_BOVIN 7 APNHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESFQDENFVFEEFARQNLKDAGEYKE 393
SCOP domains d1cf1c1 C:7-182 Arrestin d1cf1c2 C:183-393 Arrestin SCOP domains
CATH domains ---1cf1C01 C:10-182 [code=2.60.40.840, no name defined] ----1cf1C02 C:187-375 [code=2.60.40.640, no name defined] ------------------ CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeee.....eeeee...eeee.......eeeeeee........eeeeeeeeeeee...........eeee.eeeeeeee..........hhhhhhhhhh...eeeeee.........eee..........eeeeeeeeeeee.hhhhh........eeeee.eeee...........eeeeeeeee..eeeeeeeee...eee....eeeeeeeee.....eeeeeeeeeeeeee......eeeeeeeeeee.......eeeeeeeee...hhh...............................hhhh.eeeeeeeeeeeee.........eeeeeeeeeeee........-------...eeeee.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------ARRESTINS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.2 Exon 1.3 PDB: C:26-4--------------Exon 1.5 PDB: C:61-125 UniProt: 61-125 Exon 1.6 Exon 1.7 PDB: C:146-171 -------------------------------------------------------------------------Exon 1.10 PDB: C:245-269---------------------------------------------Exon 1.12 PDB: C:315-341 -------Exon 1.14 ----Exon 1.17 Transcript 1 (1)
Transcript 1 (2) ---------------------------------------Exon 1.4 -------------------------------------------------------------------------------------------------------------Exon 1.8 PDB: C:171-216 UniProt: 171-216 Exon 1.9 PDB: C:217-245 -----------------------Exon 1.11 PDB: C:269-315 UniProt: 269-315 -------------------------Exon 1.13------------------1.15 -------------------- Transcript 1 (2)
1cf1 C 7 APNHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPD-------DENFVFEEFARQNLKDAGEYKE 393
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 | - | 376 386
364 372
Chain D from PDB Type:PROTEIN Length:368
aligned with ARRS_BOVIN | P08168 from UniProtKB/Swiss-Prot Length:404
Alignment length:378
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378
ARRS_BOVIN 9 NHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESFQDENFVFEEFARQNLK 386
SCOP domains d1cf1d1 D:9-182 Arrestin d1cf1d2 D:183-386 Arrestin SCOP domains
CATH domains -1cf1D01 D:10-182 [code=2.60.40.840, no name defined] --1cf1D02 D:185-375 [code=2.60.40.640, no name defined] ----------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeeee.....eeeee...eeeee......eeeeeee.hhhh...eeeeeeeeeeee...........eeee.eeeeeeee..........hhhhhhhhhh...eeeeee.........eee..........eeeeeeeeeeee...........hhheeeeeeeeeee.........eeeeee........eeeeeee...eee....eeeeeeeee.....eeeeeeeeeeeeee......eeeeeeeeeee.......eeeeeeeee...hhh...............................hhhh.eeeeeeeeeeeee...........eeeeeeeeee.....----------....eeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE --------------------------------------------------------ARRESTINS --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.2 Exon 1.3 PDB: D:26-4--------------Exon 1.5 PDB: D:61-125 UniProt: 61-125 Exon 1.6 Exon 1.7 PDB: D:146-171 -------------------------------------------------------------------------Exon 1.10 PDB: D:245-269---------------------------------------------Exon 1.12 PDB: D:315-341 -------Exon 1.14 ----Exon 1.17 Transcript 1 (1)
Transcript 1 (2) -------------------------------------Exon 1.4 -------------------------------------------------------------------------------------------------------------Exon 1.8 PDB: D:171-216 UniProt: 171-216 Exon 1.9 PDB: D:217-245 -----------------------Exon 1.11 PDB: D:269-315 UniProt: 269-315 -------------------------Exon 1.13------------------1.15 ------------- Transcript 1 (2)
1cf1 D 9 NHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPE----------DENFVFEEFARQNLK 386
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 | - | 378
361 372
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |