Chain A from PDB Type:PROTEIN Length:214
aligned with DTXR_CORDI | P0DJL7 from UniProtKB/Swiss-Prot Length:226
Alignment length:223
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222
DTXR_CORDI 3 DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGVGNSDAAVPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEIVDRDGHITLSHNGKDVELIDDLAHTIRIEE 225
SCOP domains d1bi2a1 A:3-64 Diphtheria toxin repressor (DtxR) d1bi2a2 A:65-140 Diphtheria toxin repressor (DtxR) d1bi2a3 A:148-225 Diphtheria toxin repressor (DtxR) SCOP domains
CATH domains 1bi2A01 A:3-74 'winged helix' repressor DNA binding domain 1bi2A02 A:75-140 Diphtheria Toxin Repressor, domain 2 1bi2A03 A:148-223 [code=2.30.30.90, no name define d] -- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) (1) --------------------------------------------H---------------------------------------------------------------------------------------------------------------------V--------A----------------T---------R---R--------L---T--M---- SAPs(SNPs) (1)
SAPs(SNPs) (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y------T---- SAPs(SNPs) (2)
PROSITE -HTH_DTXR PDB: A:4-65 UniProt: 4-65 ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1bi2 A 3 DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV-------PGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEIVDR--HITLSHNGKDVELLDDLAHTIRIEE 225
12 22 32 42 52 62 72 82 92 102 112 122 132 | - | 152 162 172 182 192 | 202 212 222
140 148 198 |
201
Chain A from PDB Type:PROTEIN Length:214
aligned with DTXR_CORDW | H2I233 from UniProtKB/Swiss-Prot Length:226
Alignment length:223
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222
DTXR_CORDW 3 DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEIVDRDGHITLSHNGKDVELLDDLAHTIRIEE 225
SCOP domains d1bi2a1 A:3-64 Diphtheria toxin repressor (DtxR) d1bi2a2 A:65-140 Diphtheria toxin repressor (DtxR) d1bi2a3 A:148-225 Diphtheria toxin repressor (DtxR) SCOP domains
CATH domains 1bi2A01 A:3-74 'winged helix' repressor DNA binding domain 1bi2A02 A:75-140 Diphtheria Toxin Repressor, domain 2 1bi2A03 A:148-223 [code=2.30.30.90, no name define d] -- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) (1) --------------------------------------------H---------------------------------------------------------------------------------------------------------------------V--------A----------------T---------R---R--------L---T--M---- SAPs(SNPs) (1)
SAPs(SNPs) (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y------T---- SAPs(SNPs) (2)
PROSITE (2) -HTH_DTXR PDB: A:4-65 UniProt: 4-65 ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1bi2 A 3 DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV-------PGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEIVDR--HITLSHNGKDVELLDDLAHTIRIEE 225
12 22 32 42 52 62 72 82 92 102 112 122 132 | - | 152 162 172 182 192 | 202 212 222
140 148 198 |
201
Chain B from PDB Type:PROTEIN Length:138
aligned with DTXR_CORDI | P0DJL7 from UniProtKB/Swiss-Prot Length:226
Alignment length:138
12 22 32 42 52 62 72 82 92 102 112 122 132
DTXR_CORDI 3 DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV 140
SCOP domains d1bi2b1 B:3-64 Diphtheria toxin repressor (DtxR) d1bi2b2 B:65-140 Diphtheria toxin repressor (DtxR) SCOP domains
CATH domains 1bi2B01 B:3-75 'winged helix' repressor DNA binding domain 1bi2B02 B:76-136 Diphtheria Toxin Repressor, domain 2 ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
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SAPs(SNPs) --------------------------------------------H--------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -HTH_DTXR PDB: B:4-65 UniProt: 4-65 --------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1bi2 B 3 DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV 140
12 22 32 42 52 62 72 82 92 102 112 122 132
Chain B from PDB Type:PROTEIN Length:138
aligned with DTXR_CORDW | H2I233 from UniProtKB/Swiss-Prot Length:226
Alignment length:138
12 22 32 42 52 62 72 82 92 102 112 122 132
DTXR_CORDW 3 DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV 140
SCOP domains d1bi2b1 B:3-64 Diphtheria toxin repressor (DtxR) d1bi2b2 B:65-140 Diphtheria toxin repressor (DtxR) SCOP domains
CATH domains 1bi2B01 B:3-75 'winged helix' repressor DNA binding domain 1bi2B02 B:76-136 Diphtheria Toxin Repressor, domain 2 ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhh.....hhhhhhhh...hhhhhhhhhhhhh...eee.....eee.hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh..hhhhhhhhhh...............hhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------H--------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -HTH_DTXR PDB: B:4-65 UniProt: 4-65 --------------------------------------------------------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1bi2 B 3 DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV 140
12 22 32 42 52 62 72 82 92 102 112 122 132
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |