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(-) Description

Title :  THE STRUCTURE OF A UNIQUE, TWO-FOLD SYMMETRIC, HAEM-BINDING SITE
 
Authors :  F. Frolow, A. J. Kalb(Gilboa), J. Yariv
Date :  06 Dec 93  (Deposition) - 20 Dec 94  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L  (2x)
Keywords :  Iron Storage And Electron Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  F. Frolow, A. J. Kalb, J. Yariv
Structure Of A Unique Twofold Symmetric Haem-Binding Site.
Nat. Struct. Biol. V. 1 453 1994
PubMed-ID: 7664064  |  Reference-DOI: 10.1038/NSB0794-453
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BACTERIOFERRITIN
    ChainsA, B, C, D, E, F, G, H, I, J, K, L
    EngineeredYES
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit ABCDEFGHIJKL
Biological Unit 1 (2x)ABCDEFGHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 30)

Asymmetric Unit (2, 30)
No.NameCountTypeFull Name
1HEM6Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
2MN24Ligand/IonMANGANESE (II) ION
Biological Unit 1 (1, 12)
No.NameCountTypeFull Name
1HEM12Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
2MN-1Ligand/IonMANGANESE (II) ION

(-) Sites  (54, 54)

Asymmetric Unit (54, 54)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:51 , GLU A:94 , GLU A:127 , HIS A:130BINDING SITE FOR RESIDUE MN A 600
02AC2SOFTWAREGLU A:18 , GLU A:51 , HIS A:54 , GLU A:127BINDING SITE FOR RESIDUE MN A 601
03AC3SOFTWAREGLU B:51 , GLU B:94 , GLU B:127 , HIS B:130BINDING SITE FOR RESIDUE MN B 600
04AC4SOFTWAREGLU B:18 , GLU B:51 , HIS B:54 , GLU B:127BINDING SITE FOR RESIDUE MN B 601
05AC5SOFTWAREGLU C:51 , GLU C:94 , GLU C:127 , HIS C:130BINDING SITE FOR RESIDUE MN C 600
06AC6SOFTWAREGLU C:18 , GLU C:51 , HIS C:54 , GLU C:127BINDING SITE FOR RESIDUE MN C 601
07AC7SOFTWAREGLU D:51 , GLU D:94 , GLU D:127 , HIS D:130BINDING SITE FOR RESIDUE MN D 600
08AC8SOFTWAREGLU D:18 , GLU D:51 , HIS D:54 , GLU D:127BINDING SITE FOR RESIDUE MN D 601
09AC9SOFTWAREGLU E:51 , GLU E:94 , GLU E:127 , HIS E:130BINDING SITE FOR RESIDUE MN E 600
10BC1SOFTWAREGLU E:18 , GLU E:51 , HIS E:54 , GLU E:127BINDING SITE FOR RESIDUE MN E 601
11BC2SOFTWAREGLU F:51 , GLU F:94 , GLU F:127 , HIS F:130BINDING SITE FOR RESIDUE MN F 600
12BC3SOFTWAREGLU F:18 , GLU F:51 , HIS F:54 , GLU F:127BINDING SITE FOR RESIDUE MN F 601
13BC4SOFTWAREGLU G:51 , GLU G:94 , GLU G:127 , HIS G:130BINDING SITE FOR RESIDUE MN G 600
14BC5SOFTWAREGLU G:18 , GLU G:51 , HIS G:54 , GLU G:127BINDING SITE FOR RESIDUE MN G 601
15BC6SOFTWAREGLU H:51 , GLU H:94 , GLU H:127 , HIS H:130BINDING SITE FOR RESIDUE MN H 600
16BC7SOFTWAREGLU H:18 , GLU H:51 , HIS H:54 , GLU H:127BINDING SITE FOR RESIDUE MN H 601
17BC8SOFTWAREGLU I:51 , GLU I:94 , GLU I:127 , HIS I:130BINDING SITE FOR RESIDUE MN I 600
18BC9SOFTWAREGLU I:18 , GLU I:51 , HIS I:54 , GLU I:127BINDING SITE FOR RESIDUE MN I 601
19CC1SOFTWAREGLU J:51 , GLU J:94 , GLU J:127 , HIS J:130BINDING SITE FOR RESIDUE MN J 600
20CC2SOFTWAREGLU J:18 , GLU J:51 , HIS J:54 , GLU J:127BINDING SITE FOR RESIDUE MN J 601
21CC3SOFTWAREGLU K:51 , GLU K:94 , GLU K:127 , HIS K:130BINDING SITE FOR RESIDUE MN K 600
22CC4SOFTWAREGLU K:18 , GLU K:51 , HIS K:54 , GLU K:127BINDING SITE FOR RESIDUE MN K 601
23CC5SOFTWAREGLU L:51 , GLU L:94 , GLU L:127 , HIS L:130BINDING SITE FOR RESIDUE MN L 600
24CC6SOFTWAREGLU L:18 , GLU L:51 , HIS L:54 , GLU L:127BINDING SITE FOR RESIDUE MN L 601
25CC7SOFTWAREASN A:23 , TYR A:45 , MET A:52 , ILE A:59 , LEU B:19 , ASN B:23 , PHE B:26 , MET B:52 , LYS B:53BINDING SITE FOR RESIDUE HEM A 200
26CC8SOFTWAREASN C:23 , TYR C:45 , MET C:52 , ILE C:59 , LEU D:19 , ASN D:23 , PHE D:26 , MET D:52 , LYS D:53BINDING SITE FOR RESIDUE HEM C 201
27CC9SOFTWAREASN E:23 , TYR E:45 , MET E:52 , ILE E:59 , LEU F:19 , ASN F:23 , PHE F:26 , MET F:52 , LYS F:53BINDING SITE FOR RESIDUE HEM E 202
28DC1SOFTWAREASN G:23 , TYR G:45 , MET G:52 , ILE G:59 , LEU H:19 , ASN H:23 , PHE H:26 , MET H:52 , LYS H:53BINDING SITE FOR RESIDUE HEM G 203
29DC2SOFTWAREASN I:23 , TYR I:45 , MET I:52 , ILE I:59 , LEU J:19 , ASN J:23 , PHE J:26 , MET J:52 , LYS J:53BINDING SITE FOR RESIDUE HEM I 204
30DC3SOFTWAREASN K:23 , TYR K:45 , MET K:52 , ILE K:59 , LEU L:19 , ASN L:23 , PHE L:26 , MET L:52 , LYS L:53BINDING SITE FOR RESIDUE HEM K 205
31MA1UNKNOWNGLU A:18 , GLU A:51 , HIS A:54 , GLU A:127NULL
32MA2UNKNOWNGLU A:51 , GLU A:94 , GLU A:127 , HIS A:130NULL
33MB1UNKNOWNGLU B:18 , GLU B:51 , HIS B:54 , GLU B:127NULL
34MB2UNKNOWNGLU B:51 , GLU B:94 , GLU B:127 , HIS B:130NULL
35MC1UNKNOWNGLU C:18 , GLU C:51 , HIS C:54 , GLU C:127NULL
36MC2UNKNOWNGLU C:51 , GLU C:94 , GLU C:127 , HIS C:130NULL
37MD1UNKNOWNGLU D:18 , GLU D:51 , HIS D:54 , GLU D:127NULL
38MD2UNKNOWNGLU D:51 , GLU D:94 , GLU D:127 , HIS D:130NULL
39ME1UNKNOWNGLU E:18 , GLU E:51 , HIS E:54 , GLU E:127NULL
40ME2UNKNOWNGLU E:51 , GLU E:94 , GLU E:127 , HIS E:130NULL
41MF1UNKNOWNGLU F:18 , GLU F:51 , HIS F:54 , GLU F:127NULL
42MF2UNKNOWNGLU F:51 , GLU F:94 , GLU F:127 , HIS F:130NULL
43MG1UNKNOWNGLU G:18 , GLU G:51 , HIS G:54 , GLU G:127NULL
44MG2UNKNOWNGLU G:51 , GLU G:94 , GLU G:127 , HIS G:130NULL
45MH1UNKNOWNGLU H:18 , GLU H:51 , HIS H:54 , GLU H:127NULL
46MH2UNKNOWNGLU H:51 , GLU H:94 , GLU H:127 , HIS H:130NULL
47MI1UNKNOWNGLU I:18 , GLU I:51 , HIS I:54 , GLU I:127NULL
48MI2UNKNOWNGLU I:51 , GLU I:94 , GLU I:127 , HIS I:130NULL
49MJ1UNKNOWNGLU J:18 , GLU J:51 , HIS J:54 , GLU J:127NULL
50MJ2UNKNOWNGLU J:51 , GLU J:94 , GLU J:127 , HIS J:130NULL
51MK1UNKNOWNGLU K:18 , GLU K:51 , HIS K:54 , GLU K:127NULL
52MK2UNKNOWNGLU K:51 , GLU K:94 , GLU K:127 , HIS K:130NULL
53ML1UNKNOWNGLU L:18 , GLU L:51 , HIS L:54 , GLU L:127NULL
54ML2UNKNOWNGLU L:51 , GLU L:94 , GLU L:127 , HIS L:130NULL

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1BCF)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1BCF)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (10, 120)

Asymmetric Unit (10, 120)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_BFR_ECOLI_001 *K38MBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LK38M
02UniProtVAR_BFR_ECOLI_002 *R57KBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LR57K
03UniProtVAR_BFR_ECOLI_003 *L68IBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LL68I
04UniProtVAR_BFR_ECOLI_004 *N78GBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LN78G
05UniProtVAR_BFR_ECOLI_005 *R88QBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LR88Q
06UniProtVAR_BFR_ECOLI_006 *A92RBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LA92R
07UniProtVAR_BFR_ECOLI_007 *D96EBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LD96E
08UniProtVAR_BFR_ECOLI_008 *N100DBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LN100D
09UniProtVAR_BFR_ECOLI_009 *G106ABFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LG106A
10UniProtVAR_BFR_ECOLI_010 *R125ABFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LR125A
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (10, 240)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_BFR_ECOLI_001 *K38MBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LK38M
02UniProtVAR_BFR_ECOLI_002 *R57KBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LR57K
03UniProtVAR_BFR_ECOLI_003 *L68IBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LL68I
04UniProtVAR_BFR_ECOLI_004 *N78GBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LN78G
05UniProtVAR_BFR_ECOLI_005 *R88QBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LR88Q
06UniProtVAR_BFR_ECOLI_006 *A92RBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LA92R
07UniProtVAR_BFR_ECOLI_007 *D96EBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LD96E
08UniProtVAR_BFR_ECOLI_008 *N100DBFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LN100D
09UniProtVAR_BFR_ECOLI_009 *G106ABFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LG106A
10UniProtVAR_BFR_ECOLI_010 *R125ABFR_ECOLI  ---  ---A/B/C/D/E/F/G/H/I/J/K/LR125A
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 24)

Asymmetric Unit (2, 24)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BACTERIOFERRITINPS00549 Bacterioferritin signature.BFR_ECOLI1-19
 
 
 
 
 
 
 
 
 
 
 
  12A:1-19
B:1-19
C:1-19
D:1-19
E:1-19
F:1-19
G:1-19
H:1-19
I:1-19
J:1-19
K:1-19
L:1-19
2FERRITIN_LIKEPS50905 Ferritin-like diiron domain profile.BFR_ECOLI1-145
 
 
 
 
 
 
 
 
 
 
 
  12A:1-145
B:1-145
C:1-145
D:1-145
E:1-145
F:1-145
G:1-145
H:1-145
I:1-145
J:1-145
K:1-145
L:1-145
Biological Unit 1 (2, 48)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BACTERIOFERRITINPS00549 Bacterioferritin signature.BFR_ECOLI1-19
 
 
 
 
 
 
 
 
 
 
 
  24A:1-19
B:1-19
C:1-19
D:1-19
E:1-19
F:1-19
G:1-19
H:1-19
I:1-19
J:1-19
K:1-19
L:1-19
2FERRITIN_LIKEPS50905 Ferritin-like diiron domain profile.BFR_ECOLI1-145
 
 
 
 
 
 
 
 
 
 
 
  24A:1-145
B:1-145
C:1-145
D:1-145
E:1-145
F:1-145
G:1-145
H:1-145
I:1-145
J:1-145
K:1-145
L:1-145

(-) Exons   (0, 0)

(no "Exon" information available for 1BCF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfa_ A: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfA00 A:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: A:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf A   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain B from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfb_ B: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfB00 B:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: B:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf B   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain C from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfc_ C: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfC00 C:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: C:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf C   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain D from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfd_ D: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfD00 D:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: D:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf D   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain E from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfe_ E: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfE00 E:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: E:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf E   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain F from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcff_ F: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfF00 F:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: F:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf F   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain G from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfg_ G: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfG00 G:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: G:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf G   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain H from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfh_ H: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfH00 H:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: H:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf H   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain I from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfi_ I: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfI00 I:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: I:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf I   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain J from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfj_ J: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfJ00 J:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: J:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf J   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain K from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfk_ K: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfK00 K:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: K:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf K   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

Chain L from PDB  Type:PROTEIN  Length:158
 aligned with BFR_ECOLI | P0ABD3 from UniProtKB/Swiss-Prot  Length:158

    Alignment length:158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        
            BFR_ECOLI     1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
               SCOP domains d1bcfl_ L: Bacterioferritin (cytochrome b1)                                                                                                                    SCOP domains
               CATH domains 1bcfL00 L:1-158  [code=1.20.1260.10, no name defined]                                                                                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------M------------------K----------I---------G---------Q---R---E---D-----A------------------A--------------------------------- SAPs(SNPs)
                PROSITE (1) FERRITIN_LIKE  PDB: L:1-145 UniProt: 1-145                                                                                                       ------------- PROSITE (1)
                PROSITE (2) BACTERIOFERRITIN   ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bcf L   1 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG 158
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 12)

Asymmetric Unit

(-) CATH Domains  (1, 12)

Asymmetric Unit
1a1bcfA00A:1-158
1b1bcfB00B:1-158
1c1bcfK00K:1-158
1d1bcfL00L:1-158
1e1bcfC00C:1-158
1f1bcfD00D:1-158
1g1bcfE00E:1-158
1h1bcfF00F:1-158
1i1bcfG00G:1-158
1j1bcfH00H:1-158
1k1bcfI00I:1-158
1l1bcfJ00J:1-158

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1BCF)

(-) Gene Ontology  (14, 14)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L   (BFR_ECOLI | P0ABD3)
molecular function
    GO:0008199    ferric iron binding    Interacting selectively and non-covalently with ferric iron, Fe(III).
    GO:0004322    ferroxidase activity    Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0005506    iron ion binding    Interacting selectively and non-covalently with iron (Fe) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0006879    cellular iron ion homeostasis    Any process involved in the maintenance of an internal steady state of iron ions at the level of a cell.
    GO:0006880    intracellular sequestering of iron ion    The process of binding or confining iron ions in an intracellular area such that they are separated from other components of a biological system.
    GO:0006826    iron ion transport    The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BFR_ECOLI | P0ABD31bfr 2htn 2vxi 2y3q 3e1j 3e1l 3e1m 3e1n 3e1o 3e1p 3e1q 3e2c 3ghq 4cvp 4cvr 4cvs 4cvt 4u3g 4xks 4xkt 4xku

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1BCF)