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(-) Description

Title :  ANNEXIN IV
 
Authors :  R. B. Sutton, S. R. Sprang
Date :  21 Sep 95  (Deposition) - 29 Jan 96  (Release) - 12 Jun 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A
Keywords :  32. 5Kd Calelectrin, Endonexin I, Lipocortin Iv, Chromobindin Iv, Protein Ii, Calcium-Phospholipid-Binding Protein Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. B. Sutton, S. R. Sprang
Three Dimensional Structure Of Annexin Iv
Annexins: Molecular 1996 Structure To Cellular Function
PubMed: search

(-) Compounds

Molecule 1 - ANNEXIN IV
    ChainsA
    Organism CommonCATTLE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    Synonym32.5 KD CALELECTRIN, ENDONEXIN I

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMET A:257 , GLY A:259 , GLY A:261 , ASP A:301 , HOH A:379BBINDING SITE FOR RESIDUE CA A 319
2AC2SOFTWAREMET A:26 , GLY A:28 , GLY A:30 , GLU A:70 , HOH A:324B , HOH A:366ABINDING SITE FOR RESIDUE CA A 320

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1ANN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1ANN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1ANN)

(-) PROSITE Motifs  (1, 4)

Asymmetric/Biological Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ANNEXINPS00223 Annexins repeated domain signature.ANXA4_BOVIN31-83
103-155
187-239
262-314
  4A:30-82
A:102-154
A:186-238
A:261-313

(-) Exons   (11, 11)

Asymmetric/Biological Unit (11, 11)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENSBTAT000000014631ENSBTAE00000263146chr11:70037752-7003780251ANXA4_BOVIN-00--
1.2ENSBTAT000000014632ENSBTAE00000396308chr11:70067098-7006714952ANXA4_BOVIN1-110--
1.3ENSBTAT000000014633ENSBTAE00000392060chr11:70080212-7008029988ANXA4_BOVIN2-31301A:4-3027
1.4ENSBTAT000000014634ENSBTAE00000011722chr11:70085722-7008581695ANXA4_BOVIN31-62321A:30-6132
1.8ENSBTAT000000014638ENSBTAE00000011723chr11:70088905-70089018114ANXA4_BOVIN63-100381A:62-9938
1.10ENSBTAT0000000146310ENSBTAE00000422389chr11:70089849-7008993991ANXA4_BOVIN101-131311A:100-13031
1.11ENSBTAT0000000146311ENSBTAE00000413811chr11:70091270-7009134980ANXA4_BOVIN131-157271A:130-15627
1.12ENSBTAT0000000146312ENSBTAE00000378694chr11:70093470-7009352657ANXA4_BOVIN158-176191A:157-17519
1.13ENSBTAT0000000146313ENSBTAE00000410867chr11:70101451-7010154494ANXA4_BOVIN177-208321A:176-20732
1.14ENSBTAT0000000146314ENSBTAE00000384570chr11:70107309-7010740496ANXA4_BOVIN208-240331A:207-23933
1.15ENSBTAT0000000146315ENSBTAE00000422047chr11:70107993-7010805159ANXA4_BOVIN240-259201A:239-25820
1.16ENSBTAT0000000146316ENSBTAE00000396304chr11:70109006-70109128123ANXA4_BOVIN260-300411A:259-29941
1.17ENSBTAT0000000146317ENSBTAE00000414557chr11:70112678-701137461069ANXA4_BOVIN301-319191A:300-31819

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:315
 aligned with ANXA4_BOVIN | P13214 from UniProtKB/Swiss-Prot  Length:319

    Alignment length:315
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314     
          ANXA4_BOVIN     5 GGTVKAASGFNAAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRINQTYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMRQDAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIKSETSGSFEDALLAIVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLILCGGDD 319
               SCOP domains d1anna_ A: Annexin IV                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains --------1annA01 A:12-84  [code=1.10.220.10, no name defined]                     1annA02 A:85-158  [code=1.10.220.10, no name defined]                     1annA03 A:159-244  [code=1.10.220.10, no name defined]                                1annA04 A:245-316  [code=1.10.220.10, no name defined]                  -- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhh......hhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhh..hhhhhhhhhhh..hhhhhhhhhhhhh......hhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhh..hhhhhhhhhhhh..........hhhhhhhhhhhhhhhh......hhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhh..hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------ANNEXIN  PDB: A:30-82 UniProt: 31-83                 -------------------ANNEXIN  PDB: A:102-154 UniProt: 103-155             -------------------------------ANNEXIN  PDB: A:186-238 UniProt: 187-239             ----------------------ANNEXIN  PDB: A:261-313 UniProt: 262-314             ----- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: A:4-30      -------------------------------Exon 1.8  PDB: A:62-99 UniProt: 63-100Exon 1.10  PDB: A:100-130      --------------------------Exon 1.12          Exon 1.13  PDB: A:176-207       -------------------------------Exon 1.15           Exon 1.16  PDB: A:259-299                Exon 1.17           Transcript 1 (1)
           Transcript 1 (2) --------------------------Exon 1.4  PDB: A:30-61          --------------------------------------------------------------------Exon 1.11  PDB: A:130-156  --------------------------------------------------Exon 1.14  PDB: A:207-239        ------------------------------------------------------------------------------- Transcript 1 (2)
                 1ann A   4 GGTVKAASGFNAAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRINQTYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMRQDAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIKSETSGSFEDALLAIVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLILCGGDD 318
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (1, 4)

Asymmetric/Biological Unit

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1ANN)

(-) Gene Ontology  (24, 24)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (ANXA4_BOVIN | P13214)
molecular function
    GO:0051059    NF-kappaB binding    Interacting selectively and non-covalently with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters.
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0005544    calcium-dependent phospholipid binding    Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.
    GO:0048306    calcium-dependent protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium.
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0035374    chondroitin sulfate binding    Interacting selectively and non-covalently with chondroitin sulfate, a glycosaminoglycan made up of two alternating monosaccharides: D-glucuronic acid (GlcA) and N-acetyl-D-galactosamine (GalNAc).
    GO:0008201    heparin binding    Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
biological process
    GO:0007219    Notch signaling pathway    A series of molecular signals initiated by the binding of an extracellular ligand to the receptor Notch on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
    GO:0030855    epithelial cell differentiation    The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium.
    GO:0032088    negative regulation of NF-kappaB transcription factor activity    Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB.
    GO:2000483    negative regulation of interleukin-8 secretion    Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-8 secretion.
    GO:0006357    regulation of transcription from RNA polymerase II promoter    Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
cellular component
    GO:0016324    apical plasma membrane    The region of the plasma membrane located at the apical end of the cell.
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0042584    chromaffin granule membrane    The lipid bilayer surrounding a chromaffin granule, a specialized secretory vesicle found in the cells of adrenal glands and various other organs, which is concerned with the synthesis, storage, metabolism, and secretion of epinephrine and norepinephrine.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0031965    nuclear membrane    Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0048471    perinuclear region of cytoplasm    Cytoplasm situated near, or occurring around, the nucleus.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0012506    vesicle membrane    The lipid bilayer surrounding any membrane-bounded vesicle in the cell.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ANXA4_BOVIN | P132141aow 1i4a

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