1ZIS - JenaLib

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Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   RECOMBINANT LUMAZINE SYNTHASE (HEXAGONAL FORM)

Authors :   F. J. Lopez-Jaramillo

Date :   27 Apr 05 (Deposition) - 03 Oct 06 (Release) - 16 Jan 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.90

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E  (1x)
Biol. Unit 2: F,G,H,I,J  (1x)
Biol. Unit 3: A (6x),B (6x),C (6x),D (6x),E (6x),F (6x),G (6x),H (6x),I (6x),J (6x)
Biol. Unit 4: A (6x),B (6x),C (6x),D (6x),E (6x),F (6x),G (6x),H (6x),I (6x),J (6x)

Keywords :   Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   F. J. Lopez-Jaramillo
Crystal Structure Of Recombinant Lumazine Synthase (Hexagonal Form)
To Be Published
PubMed: search
(for further references see the PDB file header)

Molecule 1 - 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE
	Chains	:	A, B, C, D, E, F, G, H, I, J
	EC Number	:	2.5.1.78
	Engineered	:	YES
	Expression System	:	BACILLUS SUBTILIS
	Expression System Plasmid	:	P602-22
	Expression System Strain	:	BR151
	Expression System Taxid	:	1423
	Expression System Vector Type	:	PLASMID
	Gene	:	RIBH
	Organism Scientific	:	BACILLUS SUBTILIS
	Organism Taxid	:	1423
	Synonym	:	DMRL SYNTHASE, LUMAZINE SYNTHASE, RIBOFLAVIN SYNTHASE BETA CHAIN

		1	2	3	4	5	6	7	8	9	10
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I	J
Biological Unit 1 (1x)	:	A	B	C	D	E
Biological Unit 2 (1x)	:						F	G	H	I	J
Biological Unit 3 (6x)	:	A (6x)	B (6x)	C (6x)	D (6x)	E (6x)	F (6x)	G (6x)	H (6x)	I (6x)	J (6x)
Biological Unit 4 (6x)	:	A (6x)	B (6x)	C (6x)	D (6x)	E (6x)	F (6x)	G (6x)	H (6x)	I (6x)	J (6x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 20)

No.	Name	Count	Type	Full Name
1	INI	10	Mod. Residue	5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE
2	PO4	10	Ligand/Ion	PHOSPHATE ION

Biological Unit 1 (2, 10)

No.	Name	Count	Type	Full Name
1	INI	5	Mod. Residue	5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE
2	PO4	5	Ligand/Ion	PHOSPHATE ION

Biological Unit 2 (2, 10)

No.	Name	Count	Type	Full Name
1	INI	5	Mod. Residue	5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE
2	PO4	5	Ligand/Ion	PHOSPHATE ION

Biological Unit 3 (2, 60)

No.	Name	Count	Type	Full Name
1	INI	30	Mod. Residue	5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE
2	PO4	30	Ligand/Ion	PHOSPHATE ION

Biological Unit 4 (2, 60)

No.	Name	Count	Type	Full Name
1	INI	30	Mod. Residue	5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE
2	PO4	30	Ligand/Ion	PHOSPHATE ION

Asymmetric Unit (20, 20)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:84 , ALA A:85 , THR A:86 , ARG E:127	BINDING SITE FOR RESIDUE PO4 A 501
02	AC2	SOFTWARE	ARG A:127 , GLY B:84 , ALA B:85 , THR B:86	BINDING SITE FOR RESIDUE PO4 B 502
03	AC3	SOFTWARE	ARG B:127 , GLY C:84 , ALA C:85 , THR C:86	BINDING SITE FOR RESIDUE PO4 C 503
04	AC4	SOFTWARE	ARG C:127 , GLY D:84 , ALA D:85 , THR D:86	BINDING SITE FOR RESIDUE PO4 D 504
05	AC5	SOFTWARE	ARG D:127 , GLY E:84 , ALA E:85 , THR E:86	BINDING SITE FOR RESIDUE PO4 D 505
06	AC6	SOFTWARE	ARG F:127 , GLY G:84 , ALA G:85 , THR G:86	BINDING SITE FOR RESIDUE PO4 G 506
07	AC7	SOFTWARE	ARG H:127 , GLY I:84 , ALA I:85 , THR I:86	BINDING SITE FOR RESIDUE PO4 I 507
08	AC8	SOFTWARE	ARG G:127 , GLY H:84 , ALA H:85 , THR H:86	BINDING SITE FOR RESIDUE PO4 H 508
09	AC9	SOFTWARE	ARG I:127 , GLY J:84 , ALA J:85 , THR J:86	BINDING SITE FOR RESIDUE PO4 J 509
10	BC1	SOFTWARE	GLY F:84 , ALA F:85 , THR F:86 , ARG J:127	BINDING SITE FOR RESIDUE PO4 F 510
11	BC2	SOFTWARE	PHE A:22 , ASN A:23 , GLY A:55 , ALA A:56 , PHE A:57 , GLU A:58 , THR A:80 , VAL A:81 , ILE A:82 , HIS A:88 , VAL A:92 , ILE E:112 , PHE E:113 , LYS E:135	BINDING SITE FOR RESIDUE INI A 200
12	BC3	SOFTWARE	ILE A:112 , PHE A:113 , LYS A:135 , PHE B:22 , ASN B:23 , GLY B:55 , ALA B:56 , PHE B:57 , GLU B:58 , THR B:80 , VAL B:81 , ILE B:82 , HIS B:88 , VAL B:92	BINDING SITE FOR RESIDUE INI B 201
13	BC4	SOFTWARE	ILE B:112 , PHE B:113 , PHE C:22 , ASN C:23 , GLY C:55 , ALA C:56 , PHE C:57 , GLU C:58 , THR C:80 , VAL C:81 , ILE C:82 , HIS C:88 , VAL C:92	BINDING SITE FOR RESIDUE INI C 202
14	BC5	SOFTWARE	ILE C:112 , PHE C:113 , LYS C:135 , PHE D:22 , ASN D:23 , GLY D:55 , ALA D:56 , PHE D:57 , GLU D:58 , THR D:80 , VAL D:81 , ILE D:82 , HIS D:88 , VAL D:92	BINDING SITE FOR RESIDUE INI D 203
15	BC6	SOFTWARE	ILE D:112 , PHE D:113 , LYS D:135 , PHE E:22 , ASN E:23 , GLY E:55 , ALA E:56 , PHE E:57 , GLU E:58 , THR E:80 , VAL E:81 , ILE E:82 , HIS E:88 , VAL E:92	BINDING SITE FOR RESIDUE INI E 204
16	BC7	SOFTWARE	PHE F:22 , ASN F:23 , GLY F:55 , ALA F:56 , PHE F:57 , GLU F:58 , THR F:80 , VAL F:81 , ILE F:82 , HIS F:88 , VAL F:92 , ILE J:112 , PHE J:113 , LYS J:135	BINDING SITE FOR RESIDUE INI F 205
17	BC8	SOFTWARE	ILE F:112 , PHE F:113 , PHE G:22 , ASN G:23 , GLY G:55 , ALA G:56 , PHE G:57 , GLU G:58 , THR G:80 , VAL G:81 , ILE G:82 , HIS G:88 , VAL G:92	BINDING SITE FOR RESIDUE INI G 206
18	BC9	SOFTWARE	ILE G:112 , PHE G:113 , LYS G:135 , PHE H:22 , ASN H:23 , GLY H:55 , ALA H:56 , PHE H:57 , GLU H:58 , THR H:80 , VAL H:81 , ILE H:82 , HIS H:88 , VAL H:92	BINDING SITE FOR RESIDUE INI H 207
19	CC1	SOFTWARE	ILE H:112 , PHE H:113 , PHE I:22 , ASN I:23 , GLY I:55 , ALA I:56 , PHE I:57 , GLU I:58 , THR I:80 , VAL I:81 , ILE I:82 , HIS I:88 , VAL I:92	BINDING SITE FOR RESIDUE INI I 208
20	CC2	SOFTWARE	ILE I:112 , PHE I:113 , PHE J:22 , ASN J:23 , GLY J:55 , ALA J:56 , PHE J:57 , GLU J:58 , THR J:80 , VAL J:81 , ILE J:82 , HIS J:88 , VAL J:92	BINDING SITE FOR RESIDUE INI J 209

(no "SS Bond" information available for 1ZIS)

(no "Cis Peptide Bond" information available for 1ZIS)

(no "SAP(SNP)/Variant" information available for 1ZIS)

(no "PROSITE Motif" information available for 1ZIS)

(no "Exon" information available for 1ZIS)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zisa_ A: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisA00 A:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis A   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain B from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zisb_ B: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisB00 B:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhh...hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis B   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain C from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zisc_ C: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisC00 C:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhh...hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis C   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain D from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zisd_ D: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisD00 D:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhh...hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis D   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain E from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zise_ E: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisE00 E:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis E   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain F from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zisf_ F: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisF00 F:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis F   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain G from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zisg_ G: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisG00 G:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhh...hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis G   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain H from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zish_ H: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisH00 H:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhh...hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis H   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain I from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zisi_ I: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisI00 I:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis I   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain J from PDB  Type:PROTEIN  Length:154
 aligned with RISB_BACSU | P11998 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
           RISB_BACSU     1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
               SCOP domains d1zisj_ J: Lumazine synthase                                                                                                                               SCOP domains
               CATH domains 1zisJ00 J:1-154  [code=3.40.50.960, no name defined]                                                                                                       CATH domains
           Pfam domains (1) ---------DMRL_synthase-1zisJ01 J:10-153                                                                                                                  - Pfam domains (1)
           Pfam domains (2) ---------DMRL_synthase-1zisJ02 J:10-153                                                                                                                  - Pfam domains (2)
           Pfam domains (3) ---------DMRL_synthase-1zisJ03 J:10-153                                                                                                                  - Pfam domains (3)
           Pfam domains (4) ---------DMRL_synthase-1zisJ04 J:10-153                                                                                                                  - Pfam domains (4)
           Pfam domains (5) ---------DMRL_synthase-1zisJ05 J:10-153                                                                                                                  - Pfam domains (5)
           Pfam domains (6) ---------DMRL_synthase-1zisJ06 J:10-153                                                                                                                  - Pfam domains (6)
           Pfam domains (7) ---------DMRL_synthase-1zisJ07 J:10-153                                                                                                                  - Pfam domains (7)
           Pfam domains (8) ---------DMRL_synthase-1zisJ08 J:10-153                                                                                                                  - Pfam domains (8)
           Pfam domains (9) ---------DMRL_synthase-1zisJ09 J:10-153                                                                                                                  - Pfam domains (9)
          Pfam domains (10) ---------DMRL_synthase-1zisJ10 J:10-153                                                                                                                  - Pfam domains (10)
         Sec.struct. author .eee..........eeeeee..hhhhhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhheee..eehhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zis J   1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

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Folds(

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Superfamilies( (-)

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Families(

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Protein Domains( (-)

)

Organisms( (-)

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Class: Alpha and beta proteins (a/b) (23833)

Fold: Lumazine synthase (27)

Superfamily: Lumazine synthase (27)

Family: Lumazine synthase (26)

Protein domain: Lumazine synthase (19)

Bacillus subtilis [TaxId: 1423] (2)

1a	d1zisa_	A:
1b	d1zisb_	B:
1c	d1zisc_	C:
1d	d1zisd_	D:
1e	d1zise_	E:
1f	d1zisf_	F:
1g	d1zisg_	G:
1h	d1zish_	H:
1i	d1zisi_	I:
1j	d1zisj_	J:

Asymmetric Unit

Classes(

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Architectures( (-)

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Topologies( (-)

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Homologous Superfamilies( (-)

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Organisms( (-)

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Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: [code=3.40.50.960, no name defined] (36)

Bacillus subtilis. Organism_taxid: 1423. (1)

1a	1zisA00	A:1-154
1b	1zisB00	B:1-154
1c	1zisC00	C:1-154
1d	1zisD00	D:1-154
1e	1zisE00	E:1-154
1f	1zisF00	F:1-154
1g	1zisG00	G:1-154
1h	1zisH00	H:1-154
1i	1zisI00	I:1-154
1j	1zisJ00	J:1-154

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: DMRL_synthase] (19)

Family: DMRL_synthase (19)

Bacillus subtilis (2)

1a	DMRL_synthase-1zisJ01	J:10-153
1b	DMRL_synthase-1zisJ02	J:10-153
1c	DMRL_synthase-1zisJ03	J:10-153
1d	DMRL_synthase-1zisJ04	J:10-153
1e	DMRL_synthase-1zisJ05	J:10-153
1f	DMRL_synthase-1zisJ06	J:10-153
1g	DMRL_synthase-1zisJ07	J:10-153
1h	DMRL_synthase-1zisJ08	J:10-153
1i	DMRL_synthase-1zisJ09	J:10-153
1j	DMRL_synthase-1zisJ10	J:10-153

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H,I,J (RISB_BACSU | P11998)

molecular function
	GO:0000906	6,7-dimethyl-8-ribityllumazine synthase activity	Catalysis of the reaction: 3,4-dihydroxy-2-butanone-4-phosphate + 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione = 6,7-dimethyl-8-ribityllumazine + phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0009231	riboflavin biosynthetic process	The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).
cellular component
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0009349	riboflavin synthase complex	An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.

Asymmetric Unit
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	RISB_BACSU \| P11998	:	1rvv

1c2y	DIFFERENT SOURCE: SPINACIA OLERACEA
1di0	DIFFERENT SOURCE: BRUCELLA ABORTUS
1ejb	DIFFERENT SOURCE: SACCHAROMYCES CEREVISIAE
1hqk	DIFFERENT SOURCE: AQUIFEX AEOLICUS
1kyv	DIFFERENT SOURCE: SCHIZOSACCHAROMYCES POMBE
1rvv	SAME PROTEIN BUT DIFFERENT CRYSTAL FORM

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