1Z8L - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF PROSTATE-SPECIFIC MEMBRANE ANTIGEN, A TUMOR MARKER AND PEPTIDASE

Authors :   M. I. Davis, M. J. Bennett, L. M. Thomas, P. J. Bjorkman

Date :   30 Mar 05 (Deposition) - 19 Apr 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.50

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Dimeric Protein With Three Domains Of Type A+B, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. I. Davis, M. J. Bennett, L. M. Thomas, P. J. Bjorkman
Crystal Structure Of Prostate-Specific Membrane Antigen, A Tumor Marker And Peptidase
Proc. Natl. Acad. Sci. Usa V. 102 5981 2005
PubMed-ID: 15837926 | Reference-DOI: 10.1073/PNAS.0502101102

Molecule 1 - GLUTAMATE CARBOXYPEPTIDASE II
	Chains	:	A, B, C, D
	EC Number	:	3.4.17.21
	Engineered	:	YES
	Expression System Vector Type	:	BACULOVIRUS
	Fragment	:	CYTOPLASMIC DOMAIN (RESIDUES 56-750)
	Gene	:	FOLH1, FOLH, NAALAD1, PSM, PSMA
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	MEMBRANE GLUTAMATE CARBOXYPEPTIDASE, MGCP, N-ACETYLATED- ALPHA-LINKED ACIDIC DIPEPTIDASE I, NAALADASE I, PTEROYLPOLY-GAMMA- GLUTAMATE CARBOXYPEPTIDASE, FOLYLPOLY-GAMMA-GLUTAMATE CARBOXYPEPTIDASE, FGCP, FOLATE HYDROLASE 1, PROSTATE-SPECIFIC MEMBRANE ANTIGEN, PSMA, PSM

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 56)

No.	Name	Count	Type	Full Name
1	NAG	36	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
2	NDG	12	Ligand/Ion	2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
3	ZN	8	Ligand/Ion	ZINC ION

Biological Unit 1 (2, 24)

No.	Name	Count	Type	Full Name
1	NAG	18	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
2	NDG	6	Ligand/Ion	2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
3	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (2, 24)

No.	Name	Count	Type	Full Name
1	NAG	18	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
2	NDG	6	Ligand/Ion	2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
3	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (56, 56)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN A:76 , GLN A:95 , NDG A:1761	BINDING SITE FOR RESIDUE NAG A 1754
02	AC2	SOFTWARE	GLN A:95 , NAG A:1754	BINDING SITE FOR RESIDUE NDG A 1761
03	AC3	SOFTWARE	ASN A:121 , HIS A:124 , NAG A:1762	BINDING SITE FOR RESIDUE NAG A 1755
04	AC4	SOFTWARE	NAG A:1755	BINDING SITE FOR RESIDUE NAG A 1762
05	AC5	SOFTWARE	ASN A:153 , NDG A:1763	BINDING SITE FOR RESIDUE NDG A 1756
06	AC6	SOFTWARE	NDG A:1756	BINDING SITE FOR RESIDUE NDG A 1763
07	AC7	SOFTWARE	TRP A:246 , ASN A:459 , GLU A:486 , PHE A:565 , TYR A:566 , NAG A:1764	BINDING SITE FOR RESIDUE NAG A 1757
08	AC8	SOFTWARE	NAG A:1757	BINDING SITE FOR RESIDUE NAG A 1764
09	AC9	SOFTWARE	SER A:472 , ASN A:476 , NAG A:1765	BINDING SITE FOR RESIDUE NAG A 1758
10	BC1	SOFTWARE	NAG A:1758	BINDING SITE FOR RESIDUE NAG A 1765
11	BC2	SOFTWARE	SER A:634 , ASN A:638 , GLN A:740 , TYR B:277	BINDING SITE FOR RESIDUE NAG A 1759
12	BC3	SOFTWARE	GLU A:137 , ASN A:140	BINDING SITE FOR RESIDUE NAG A 1760
13	BC4	SOFTWARE	ASN B:76 , GLN B:95 , NDG B:2761	BINDING SITE FOR RESIDUE NAG B 2754
14	BC5	SOFTWARE	GLN B:95 , NAG B:2754	BINDING SITE FOR RESIDUE NDG B 2761
15	BC6	SOFTWARE	ASN B:121 , HIS B:124 , NAG B:2762	BINDING SITE FOR RESIDUE NAG B 2755
16	BC7	SOFTWARE	NAG B:2755	BINDING SITE FOR RESIDUE NAG B 2762
17	BC8	SOFTWARE	ASN B:153 , NDG B:2763	BINDING SITE FOR RESIDUE NDG B 2756
18	BC9	SOFTWARE	NDG B:2756	BINDING SITE FOR RESIDUE NDG B 2763
19	CC1	SOFTWARE	TRP B:246 , ASN B:459 , GLU B:486 , PHE B:565 , TYR B:566 , NAG B:2764	BINDING SITE FOR RESIDUE NAG B 2757
20	CC2	SOFTWARE	NAG B:2757	BINDING SITE FOR RESIDUE NAG B 2764
21	CC3	SOFTWARE	SER B:472 , ASN B:476 , NAG B:2765	BINDING SITE FOR RESIDUE NAG B 2758
22	CC4	SOFTWARE	NAG B:2758	BINDING SITE FOR RESIDUE NAG B 2765
23	CC5	SOFTWARE	SER B:634 , ASN B:638 , GLN B:740	BINDING SITE FOR RESIDUE NAG B 2759
24	CC6	SOFTWARE	GLU B:137 , ASN B:140	BINDING SITE FOR RESIDUE NAG B 2760
25	CC7	SOFTWARE	ASN C:76 , GLN C:95 , NDG C:3761	BINDING SITE FOR RESIDUE NAG C 3754
26	CC8	SOFTWARE	GLN C:95 , NAG C:3754	BINDING SITE FOR RESIDUE NDG C 3761
27	CC9	SOFTWARE	ASN C:121 , HIS C:124 , NAG C:3762	BINDING SITE FOR RESIDUE NAG C 3755
28	DC1	SOFTWARE	NAG C:3755	BINDING SITE FOR RESIDUE NAG C 3762
29	DC2	SOFTWARE	ASN C:153 , NDG C:3763	BINDING SITE FOR RESIDUE NDG C 3756
30	DC3	SOFTWARE	NDG C:3756	BINDING SITE FOR RESIDUE NDG C 3763
31	DC4	SOFTWARE	TRP C:246 , ASN C:459 , GLU C:486 , PHE C:565 , TYR C:566 , NAG C:3764	BINDING SITE FOR RESIDUE NAG C 3757
32	DC5	SOFTWARE	NAG C:3757	BINDING SITE FOR RESIDUE NAG C 3764
33	DC6	SOFTWARE	SER C:472 , ASN C:476 , NAG C:3765	BINDING SITE FOR RESIDUE NAG C 3758
34	DC7	SOFTWARE	NAG C:3758	BINDING SITE FOR RESIDUE NAG C 3765
35	DC8	SOFTWARE	SER C:634 , ASN C:638 , GLN C:740 , TYR D:277	BINDING SITE FOR RESIDUE NAG C 3759
36	DC9	SOFTWARE	GLU C:137 , ASN C:140	BINDING SITE FOR RESIDUE NAG C 3760
37	EC1	SOFTWARE	ASN D:76 , GLN D:95 , NDG D:4761	BINDING SITE FOR RESIDUE NAG D 4754
38	EC2	SOFTWARE	GLN D:95 , NAG D:4754	BINDING SITE FOR RESIDUE NDG D 4761
39	EC3	SOFTWARE	ASN D:121 , HIS D:124 , NAG D:4762	BINDING SITE FOR RESIDUE NAG D 4755
40	EC4	SOFTWARE	NAG D:4755	BINDING SITE FOR RESIDUE NAG D 4762
41	EC5	SOFTWARE	ASN D:153 , NDG D:4763	BINDING SITE FOR RESIDUE NDG D 4756
42	EC6	SOFTWARE	NDG D:4756	BINDING SITE FOR RESIDUE NDG D 4763
43	EC7	SOFTWARE	TRP D:246 , ASN D:459 , GLU D:486 , PHE D:565 , TYR D:566 , NAG D:4764	BINDING SITE FOR RESIDUE NAG D 4757
44	EC8	SOFTWARE	NAG D:4757	BINDING SITE FOR RESIDUE NAG D 4764
45	EC9	SOFTWARE	SER D:472 , ASN D:476 , NAG D:4765	BINDING SITE FOR RESIDUE NAG D 4758
46	FC1	SOFTWARE	NAG D:4758	BINDING SITE FOR RESIDUE NAG D 4765
47	FC2	SOFTWARE	TYR C:277 , SER D:634 , ASN D:638 , GLN D:740	BINDING SITE FOR RESIDUE NAG D 4759
48	FC3	SOFTWARE	GLU D:137 , ASN D:140	BINDING SITE FOR RESIDUE NAG D 4760
49	FC4	SOFTWARE	HIS A:377 , ASP A:387 , GLU A:424 , ASP A:453 , ASN A:519 , ZN A:1752 , HOH A:1753	BINDING SITE FOR RESIDUE ZN A 1751
50	FC5	SOFTWARE	ASP A:387 , GLU A:425 , TYR A:552 , HIS A:553 , ZN A:1751 , HOH A:1753	BINDING SITE FOR RESIDUE ZN A 1752
51	FC6	SOFTWARE	HIS B:377 , ASP B:387 , GLU B:424 , ASP B:453 , ASN B:519 , ZN B:2752 , HOH B:2753	BINDING SITE FOR RESIDUE ZN B 2751
52	FC7	SOFTWARE	ASP B:387 , GLU B:425 , TYR B:552 , HIS B:553 , ZN B:2751 , HOH B:2753	BINDING SITE FOR RESIDUE ZN B 2752
53	FC8	SOFTWARE	HIS C:377 , ASP C:387 , GLU C:424 , ASP C:453 , ASN C:519 , ZN C:3752 , HOH C:3753	BINDING SITE FOR RESIDUE ZN C 3751
54	FC9	SOFTWARE	ASP C:387 , GLU C:425 , TYR C:552 , HIS C:553 , ZN C:3751 , HOH C:3753	BINDING SITE FOR RESIDUE ZN C 3752
55	GC1	SOFTWARE	HIS D:377 , ASP D:387 , GLU D:424 , ASP D:453 , ASN D:519 , ZN D:4752 , HOH D:4753	BINDING SITE FOR RESIDUE ZN D 4751
56	GC2	SOFTWARE	ASP D:387 , GLU D:425 , TYR D:552 , HIS D:553 , ZN D:4751 , HOH D:4753	BINDING SITE FOR RESIDUE ZN D 4752

(no "SS Bond" information available for 1Z8L)

Asymmetric Unit

No.	Residues
1	Asp A:387	-	Pro A:388
2	Asp B:387	-	Pro B:388
3	Asp C:387	-	Pro C:388
4	Asp D:387	-	Pro D:388

Asymmetric Unit (3, 12)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_024592	Y	75	H	FOLH1_HUMAN	Polymorphism	202676	A/B/C/D	Y	75	H
2	UniProt	VAR_012736	H	475	Y	FOLH1_HUMAN	Polymorphism	61886492	A/B/C/D	H	475	Y
3	UniProt	VAR_028882	V	627	L	FOLH1_HUMAN	Polymorphism	2988342	A/B/C/D	V	627	L

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (3, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_024592	Y	75	H	FOLH1_HUMAN	Polymorphism	202676	A/B	Y	75	H
2	UniProt	VAR_012736	H	475	Y	FOLH1_HUMAN	Polymorphism	61886492	A/B	H	475	Y
3	UniProt	VAR_028882	V	627	L	FOLH1_HUMAN	Polymorphism	2988342	A/B	V	627	L

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (3, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_024592	Y	75	H	FOLH1_HUMAN	Polymorphism	202676	C/D	Y	75	H
2	UniProt	VAR_012736	H	475	Y	FOLH1_HUMAN	Polymorphism	61886492	C/D	H	475	Y
3	UniProt	VAR_028882	V	627	L	FOLH1_HUMAN	Polymorphism	2988342	C/D	V	627	L

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 1Z8L)

Asymmetric Unit (18, 72)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1a	ENST00000256999	1a	ENSE00001364015	chr11:49230222-49229844	379	FOLH1_HUMAN	1-40	40	0	-	-
1.5	ENST00000256999	5	ENSE00001771797	chr11:49227724-49227619	106	FOLH1_HUMAN	40-75	36	4	A:56-75 B:56-75 C:56-75 D:56-75	20 20 20 20
1.6c	ENST00000256999	6c	ENSE00001804269	chr11:49221993-49221807	187	FOLH1_HUMAN	75-137	63	4	A:75-137 B:75-137 C:75-137 D:75-137	63 63 63 63
1.7a	ENST00000256999	7a	ENSE00001603272	chr11:49214446-49214345	102	FOLH1_HUMAN	138-171	34	4	A:138-171 B:138-171 C:138-171 D:138-171	34 34 34 34
1.8a	ENST00000256999	8a	ENSE00001701397	chr11:49208321-49208196	126	FOLH1_HUMAN	172-213	42	4	A:172-213 B:172-213 C:172-213 D:172-213	42 42 42 42
1.9b	ENST00000256999	9b	ENSE00001627795	chr11:49207407-49207221	187	FOLH1_HUMAN	214-276	63	4	A:214-276 B:214-276 C:214-276 D:214-276	63 63 63 63
1.10	ENST00000256999	10	ENSE00001652660	chr11:49204794-49204701	94	FOLH1_HUMAN	276-307	32	4	A:276-307 B:276-307 C:276-307 D:276-307	32 32 32 32
1.11b	ENST00000256999	11b	ENSE00001780619	chr11:49197509-49197411	99	FOLH1_HUMAN	307-340	34	4	A:307-340 B:307-340 C:307-340 D:307-340	34 34 34 34
1.12a	ENST00000256999	12a	ENSE00001612233	chr11:49196529-49196444	86	FOLH1_HUMAN	340-369	30	4	A:340-369 B:340-369 C:340-369 D:340-369	30 30 30 30
1.13	ENST00000256999	13	ENSE00001643735	chr11:49195028-49194909	120	FOLH1_HUMAN	369-409	41	4	A:369-409 B:369-409 C:369-409 D:369-409	41 41 41 41
1.14	ENST00000256999	14	ENSE00001765179	chr11:49192829-49192747	83	FOLH1_HUMAN	409-436	28	4	A:409-436 B:409-436 C:409-436 D:409-436	28 28 28 28
1.15	ENST00000256999	15	ENSE00001800342	chr11:49190810-49190747	64	FOLH1_HUMAN	437-458	22	4	A:437-458 B:437-458 C:437-458 D:437-458	22 22 22 22
1.16	ENST00000256999	16	ENSE00001739662	chr11:49186324-49186257	68	FOLH1_HUMAN	458-480	23	4	A:458-480 B:458-480 C:458-480 D:458-480	23 23 23 23
1.18	ENST00000256999	18	ENSE00001704015	chr11:49179595-49179504	92	FOLH1_HUMAN	481-511	31	4	A:481-511 B:481-511 C:481-511 D:481-511	31 31 31 31
1.19a	ENST00000256999	19a	ENSE00001639568	chr11:49178359-49178269	91	FOLH1_HUMAN	511-541	31	4	A:511-541 B:511-541 C:511-541 D:511-541	31 31 31 31
1.20a	ENST00000256999	20a	ENSE00001804599	chr11:49176044-49175780	265	FOLH1_HUMAN	542-630	89	4	A:542-630 B:542-630 C:542-630 D:542-630	89 89 89 89
1.21b	ENST00000256999	21b	ENSE00001637755	chr11:49175479-49175398	82	FOLH1_HUMAN	630-657	28	4	A:630-657 B:630-657 C:630-657 D:630-657	28 28 28 28
1.22	ENST00000256999	22	ENSE00001748529	chr11:49170283-49170191	93	FOLH1_HUMAN	657-688	32	4	A:657-688 B:657-688 C:657-688 D:657-688	32 32 32 32
1.23d	ENST00000256999	23d	ENSE00002199992	chr11:49168497-49168187	311	FOLH1_HUMAN	688-750	63	4	A:688-750 B:688-750 C:688-750 D:688-750	63 63 63 63

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:695
 aligned with FOLH1_HUMAN | Q04609 from UniProtKB/Swiss-Prot  Length:750

    Alignment length:695
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745     
          FOLH1_HUMAN    56 HNMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA 750
               SCOP domains -d1z8la3 A:57-117,A:351-593                                   d1z8la2 A:118-350 Glutamate carboxypeptidase II                                                                                                                                                                                          d1z8la3 A:57-117,A:351-593 Glutamate carboxypeptidase II FOLH1                                                                                                                                                                                     d1z8la1 A:594-750 Glutamate carboxypeptidase II                                                                                                               SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhh.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh..eeeeeeeeeeeee.......eeeee..............................ee.......ee.eeee.....hhhhh............eeeee....hhhhhhhhhhh.....eeee...........ee....ee........ee........................hhhhh.......eeeehhhhhhhhhhhh...............................eeeee...eeeeeeeeeeeeee....eeeeeeeeeee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhheeeeee..........eeeee...hhhhhhhhhhh...........hhhhhhhhhh..........ee......hhhhhhhh....eeeeee....................hhhhhhh.....hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh.hhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.............................hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------H---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------------------------------------------------------------------------------------------------------------------------------------------------------L--------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5            --------------------------------------------------------------Exon 1.7a  PDB: A:138-171         Exon 1.8a  PDB: A:172-213 UniProt: 172-213--------------------------------------------------------------Exon 1.10  PDB: A:276-307       --------------------------------Exon 1.12a  PDB: A:340-369    ---------------------------------------Exon 1.14  PDB: A:409-436   Exon 1.15             ----------------------Exon 1.18  PDB: A:481-511      ------------------------------Exon 1.20a  PDB: A:542-630 UniProt: 542-630                                              --------------------------Exon 1.22  PDB: A:657-688       -------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------Exon 1.6c  PDB: A:75-137 UniProt: 75-137                       ----------------------------------------------------------------------------Exon 1.9b  PDB: A:214-276 UniProt: 214-276                     ------------------------------Exon 1.11b  PDB: A:307-340        ----------------------------Exon 1.13  PDB: A:369-409                ------------------------------------------------Exon 1.16              ------------------------------Exon 1.19a  PDB: A:511-541     ----------------------------------------------------------------------------------------Exon 1.21b  PDB: A:630-657  ------------------------------Exon 1.23d  PDB: A:688-750 UniProt: 688-750                     Transcript 1 (2)
                 1z8l A  56 HNMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA 750
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745

Chain B from PDB  Type:PROTEIN  Length:695
 aligned with FOLH1_HUMAN | Q04609 from UniProtKB/Swiss-Prot  Length:750

    Alignment length:695
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745     
          FOLH1_HUMAN    56 HNMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA 750
               SCOP domains -d1z8lb3 B:57-117,B:351-593                                   d1z8lb2 B:118-350 Glutamate carboxypeptidase II                                                                                                                                                                                          d1z8lb3 B:57-117,B:351-593 Glutamate carboxypeptidase II FOLH1                                                                                                                                                                                     d1z8lb1 B:594-750 Glutamate carboxypeptidase II                                                                                                               SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhh.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh..eeeeeeeeeeeee.......eeeee..............................ee.......ee.eeee.....hhhhh............eeeee....hhhhhhhhhhh.....eeee...........ee....ee........ee........................hhhhh.......eeeehhhhhhhhhhhh...............................eeeee...eeeeeeeeeeeeee....eeeeeeeeeee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhheeeeee..........eeeee...hhhhhhhhhhh...........hhhhhhhhhh..........ee......hhhhhhhh....eeeeee....................hhhhhhh.....hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh.hhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.............................hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------H---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------------------------------------------------------------------------------------------------------------------------------------------------------L--------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5            --------------------------------------------------------------Exon 1.7a  PDB: B:138-171         Exon 1.8a  PDB: B:172-213 UniProt: 172-213--------------------------------------------------------------Exon 1.10  PDB: B:276-307       --------------------------------Exon 1.12a  PDB: B:340-369    ---------------------------------------Exon 1.14  PDB: B:409-436   Exon 1.15             ----------------------Exon 1.18  PDB: B:481-511      ------------------------------Exon 1.20a  PDB: B:542-630 UniProt: 542-630                                              --------------------------Exon 1.22  PDB: B:657-688       -------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------Exon 1.6c  PDB: B:75-137 UniProt: 75-137                       ----------------------------------------------------------------------------Exon 1.9b  PDB: B:214-276 UniProt: 214-276                     ------------------------------Exon 1.11b  PDB: B:307-340        ----------------------------Exon 1.13  PDB: B:369-409                ------------------------------------------------Exon 1.16              ------------------------------Exon 1.19a  PDB: B:511-541     ----------------------------------------------------------------------------------------Exon 1.21b  PDB: B:630-657  ------------------------------Exon 1.23d  PDB: B:688-750 UniProt: 688-750                     Transcript 1 (2)
                 1z8l B  56 HNMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA 750
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745

Chain C from PDB  Type:PROTEIN  Length:695
 aligned with FOLH1_HUMAN | Q04609 from UniProtKB/Swiss-Prot  Length:750

    Alignment length:695
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745     
          FOLH1_HUMAN    56 HNMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA 750
               SCOP domains -d1z8lc3 C:57-117,C:351-593                                   d1z8lc2 C:118-350 Glutamate carboxypeptidase II                                                                                                                                                                                          d1z8lc3 C:57-117,C:351-593 Glutamate carboxypeptidase II FOLH1                                                                                                                                                                                     d1z8lc1 C:594-750 Glutamate carboxypeptidase II                                                                                                               SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhh.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh..eeeeeeeeeeeee.......eeeee..............................ee.......ee.eeee.....hhhhh............eeeee....hhhhhhhhhhh.....eeee...........ee....ee........ee........................hhhhh.......eeeehhhhhhhhhhhh...............................eeeee...eeeeeeeeeeeeee....eeeeeeeeeee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhheeeeee..........eeeee...hhhhhhhhhhh...........hhhhhhhhhh..........ee......hhhhhhhh....eeeeee....................hhhhhhh.....hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh.hhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.............................hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------H---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------------------------------------------------------------------------------------------------------------------------------------------------------L--------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5            --------------------------------------------------------------Exon 1.7a  PDB: C:138-171         Exon 1.8a  PDB: C:172-213 UniProt: 172-213--------------------------------------------------------------Exon 1.10  PDB: C:276-307       --------------------------------Exon 1.12a  PDB: C:340-369    ---------------------------------------Exon 1.14  PDB: C:409-436   Exon 1.15             ----------------------Exon 1.18  PDB: C:481-511      ------------------------------Exon 1.20a  PDB: C:542-630 UniProt: 542-630                                              --------------------------Exon 1.22  PDB: C:657-688       -------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------Exon 1.6c  PDB: C:75-137 UniProt: 75-137                       ----------------------------------------------------------------------------Exon 1.9b  PDB: C:214-276 UniProt: 214-276                     ------------------------------Exon 1.11b  PDB: C:307-340        ----------------------------Exon 1.13  PDB: C:369-409                ------------------------------------------------Exon 1.16              ------------------------------Exon 1.19a  PDB: C:511-541     ----------------------------------------------------------------------------------------Exon 1.21b  PDB: C:630-657  ------------------------------Exon 1.23d  PDB: C:688-750 UniProt: 688-750                     Transcript 1 (2)
                 1z8l C  56 HNMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA 750
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745

Chain D from PDB  Type:PROTEIN  Length:695
 aligned with FOLH1_HUMAN | Q04609 from UniProtKB/Swiss-Prot  Length:750

    Alignment length:695
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745     
          FOLH1_HUMAN    56 HNMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA 750
               SCOP domains -d1z8ld3 D:57-117,D:351-593                                   d1z8ld2 D:118-350 Glutamate carboxypeptidase II                                                                                                                                                                                          d1z8ld3 D:57-117,D:351-593 Glutamate carboxypeptidase II FOLH1                                                                                                                                                                                     d1z8ld1 D:594-750 Glutamate carboxypeptidase II                                                                                                               SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------------------------------------------------------------------------------------------------------------PA-1z8lD05 D:165-263                                                                               ----------------------------------------------------------------------------------------------------------Peptidase_M28-1z8lD01 D:370-560                                                                                                                                                                -----------------------------------------------------------------TFR_dimer-1z8lD09 D:626-749                                                                                                 - Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------------------------------------------------PA-1z8lD06 D:165-263                                                                               ----------------------------------------------------------------------------------------------------------Peptidase_M28-1z8lD02 D:370-560                                                                                                                                                                -----------------------------------------------------------------TFR_dimer-1z8lD10 D:626-749                                                                                                 - Pfam domains (2)
           Pfam domains (3) -------------------------------------------------------------------------------------------------------------PA-1z8lD07 D:165-263                                                                               ----------------------------------------------------------------------------------------------------------Peptidase_M28-1z8lD03 D:370-560                                                                                                                                                                -----------------------------------------------------------------TFR_dimer-1z8lD11 D:626-749                                                                                                 - Pfam domains (3)
           Pfam domains (4) -------------------------------------------------------------------------------------------------------------PA-1z8lD08 D:165-263                                                                               ----------------------------------------------------------------------------------------------------------Peptidase_M28-1z8lD04 D:370-560                                                                                                                                                                -----------------------------------------------------------------TFR_dimer-1z8lD12 D:626-749                                                                                                 - Pfam domains (4)
         Sec.struct. author .hhhhhhhh.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh..eeeeeeeeeeeee.......eeeee..............................ee.......ee.eeee.....hhhhh............eeeee....hhhhhhhhhhh.....eeee...........ee....ee........ee........................hhhhh.......eeeehhhhhhhhhhhh...............................eeeee...eeeeeeeeeeeeee....eeeeeeeeeee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhheeeeee..........eeeee...hhhhhhhhhhh...........hhhhhhhhhh..........ee......hhhhhhhh....eeeeee....................hhhhhhh.....hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh.hhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.............................hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------H---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------------------------------------------------------------------------------------------------------------------------------------------------------L--------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5            --------------------------------------------------------------Exon 1.7a  PDB: D:138-171         Exon 1.8a  PDB: D:172-213 UniProt: 172-213--------------------------------------------------------------Exon 1.10  PDB: D:276-307       --------------------------------Exon 1.12a  PDB: D:340-369    ---------------------------------------Exon 1.14  PDB: D:409-436   Exon 1.15             ----------------------Exon 1.18  PDB: D:481-511      ------------------------------Exon 1.20a  PDB: D:542-630 UniProt: 542-630                                              --------------------------Exon 1.22  PDB: D:657-688       -------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------Exon 1.6c  PDB: D:75-137 UniProt: 75-137                       ----------------------------------------------------------------------------Exon 1.9b  PDB: D:214-276 UniProt: 214-276                     ------------------------------Exon 1.11b  PDB: D:307-340        ----------------------------Exon 1.13  PDB: D:369-409                ------------------------------------------------Exon 1.16              ------------------------------Exon 1.19a  PDB: D:511-541     ----------------------------------------------------------------------------------------Exon 1.21b  PDB: D:630-657  ------------------------------Exon 1.23d  PDB: D:688-750 UniProt: 688-750                     Transcript 1 (2)
                 1z8l D  56 HNMKAFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA 750
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: N-cbl like (37)

Superfamily: Transferrin receptor-like dimerisation domain (18)

Family: Transferrin receptor-like dimerisation domain (18)

Protein domain: Glutamate carboxypeptidase II (14)

Human (Homo sapiens) [TaxId: 9606] (14)

1a	d1z8la1	A:594-750
1b	d1z8lb1	B:594-750
1c	d1z8lc1	C:594-750
1d	d1z8ld1	D:594-750

Class: Alpha and beta proteins (a/b) (23833)

Fold: Phosphorylase/hydrolase-like (558)

Superfamily: Zn-dependent exopeptidases (214)

Family: FolH catalytic domain-like (18)

Protein domain: Glutamate carboxypeptidase II FOLH1 (14)

Human (Homo sapiens) [TaxId: 9606] (14)

2a	d1z8la3	A:57-117,A:351-593
2b	d1z8lb3	B:57-117,B:351-593
2c	d1z8lc3	C:57-117,C:351-593
2d	d1z8ld3	D:57-117,D:351-593

Fold: The swivelling beta/beta/alpha domain (136)

Superfamily: PA domain (18)

Family: PA domain (18)

Protein domain: Glutamate carboxypeptidase II (14)

Human (Homo sapiens) [TaxId: 9606] (14)

3a	d1z8la2	A:118-350
3b	d1z8lb2	B:118-350
3c	d1z8lc2	C:118-350
3d	d1z8ld2	D:118-350

(no "CATH Domain" information available for 1Z8L)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Peptidase_MH (119)

Family: Peptidase_M28 (38)

Homo sapiens (Human) (30)

1a	Peptidase_M28-1z8lD01	D:370-560
1b	Peptidase_M28-1z8lD02	D:370-560
1c	Peptidase_M28-1z8lD03	D:370-560
1d	Peptidase_M28-1z8lD04	D:370-560

Clan: no clan defined [family: PA] (15)

Family: PA (15)

Homo sapiens (Human) (12)

2a	PA-1z8lD05	D:165-263
2b	PA-1z8lD06	D:165-263
2c	PA-1z8lD07	D:165-263
2d	PA-1z8lD08	D:165-263

Clan: no clan defined [family: TFR_dimer] (12)

Family: TFR_dimer (12)

Homo sapiens (Human) (12)

3a	TFR_dimer-1z8lD09	D:626-749
3b	TFR_dimer-1z8lD10	D:626-749
3c	TFR_dimer-1z8lD11	D:626-749
3d	TFR_dimer-1z8lD12	D:626-749

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (FOLH1_HUMAN | Q04609)

molecular function
	GO:1904492	Ac-Asp-Glu binding	Interacting selectively and non-covalently with Ac-Asp-Glu.
	GO:0004180	carboxypeptidase activity	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016805	dipeptidase activity	Catalysis of the hydrolysis of a dipeptide.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0004181	metallocarboxypeptidase activity	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008237	metallopeptidase activity	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:1904493	tetrahydrofolyl-poly(glutamate) polymer binding	Interacting selectively and non-covalently with tetrahydrofolyl-poly(glutamate) polymer.
biological process
	GO:0035609	C-terminal protein deglutamylation	The removal of a C-terminal, gene-encoded glutamate residue from a protein.
	GO:0008652	cellular amino acid biosynthetic process	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
	GO:0006760	folic acid-containing compound metabolic process	The chemical reactions and pathways involving a folic acid-containing compound, i.e. any of a group of heterocyclic compounds based on the pteroic acid skeleton conjugated with one or more L-glutamic acid or L-glutamate units.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
	GO:0009986	cell surface	The external part of the cell wall and/or plasma membrane.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0005887	integral component of plasma membrane	The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		NAG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NDG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		ZN	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
		CC3	[ RasMol ]	+environment [ RasMol ]
		CC4	[ RasMol ]	+environment [ RasMol ]
		CC5	[ RasMol ]	+environment [ RasMol ]
		CC6	[ RasMol ]	+environment [ RasMol ]
		CC7	[ RasMol ]	+environment [ RasMol ]
		CC8	[ RasMol ]	+environment [ RasMol ]
		CC9	[ RasMol ]	+environment [ RasMol ]
		DC1	[ RasMol ]	+environment [ RasMol ]
		DC2	[ RasMol ]	+environment [ RasMol ]
		DC3	[ RasMol ]	+environment [ RasMol ]
		DC4	[ RasMol ]	+environment [ RasMol ]
		DC5	[ RasMol ]	+environment [ RasMol ]
		DC6	[ RasMol ]	+environment [ RasMol ]
		DC7	[ RasMol ]	+environment [ RasMol ]
		DC8	[ RasMol ]	+environment [ RasMol ]
		DC9	[ RasMol ]	+environment [ RasMol ]
		EC1	[ RasMol ]	+environment [ RasMol ]
		EC2	[ RasMol ]	+environment [ RasMol ]
		EC3	[ RasMol ]	+environment [ RasMol ]
		EC4	[ RasMol ]	+environment [ RasMol ]
		EC5	[ RasMol ]	+environment [ RasMol ]
		EC6	[ RasMol ]	+environment [ RasMol ]
		EC7	[ RasMol ]	+environment [ RasMol ]
		EC8	[ RasMol ]	+environment [ RasMol ]
		EC9	[ RasMol ]	+environment [ RasMol ]
		FC1	[ RasMol ]	+environment [ RasMol ]
		FC2	[ RasMol ]	+environment [ RasMol ]
		FC3	[ RasMol ]	+environment [ RasMol ]
		FC4	[ RasMol ]	+environment [ RasMol ]
		FC5	[ RasMol ]	+environment [ RasMol ]
		FC6	[ RasMol ]	+environment [ RasMol ]
		FC7	[ RasMol ]	+environment [ RasMol ]
		FC8	[ RasMol ]	+environment [ RasMol ]
		FC9	[ RasMol ]	+environment [ RasMol ]
		GC1	[ RasMol ]	+environment [ RasMol ]
		GC2	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asp A:387 - Pro A:388	[ RasMol ]
		Asp B:387 - Pro B:388	[ RasMol ]
		Asp C:387 - Pro C:388	[ RasMol ]
		Asp D:387 - Pro D:388	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1z8l
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	FOLH1_HUMAN \| Q04609
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	3.4.17.21
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	FOLH1_HUMAN \| Q04609
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

(no "Related Entries Specified in the PDB File" available for 1Z8L)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 56)

Sites (56, 56)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (3, 12)

PROSITE Motifs (0, 0)

Exons (18, 72)

Sequences/Alignments

Classification and Annotation

SCOP Domains (3, 12)

CATH Domains (0, 0)

Pfam Domains (3, 12)

Gene Ontology (22, 22)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File