1XES - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF STILBENE SYNTHASE FROM PINUS SYLVESTRIS

Authors :   S. H. Ng, D. Chirgadze, D. Spiteller, T. L. Li, J. B. Spencer, T. L. Blundell

Date :   12 Sep 04 (Deposition) - 11 Apr 06 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.70

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Native Structure, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. H. Ng, D. Chirgadze, D. Spiteller, T. L. Li, J. B. Spencer, T. L. Blundell
Crystal Structure Of Stilbene Synthase From Pinus Sylvestris
To Be Published
PubMed: search
(for further references see the PDB file header)

Molecule 1 - DIHYDROPINOSYLVIN SYNTHASE
	Chains	:	A, B, C, D
	EC Number	:	2.3.1.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET28(A)
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	STS
	Organism Common	:	SCOTS PINE
	Organism Scientific	:	PINUS SYLVESTRIS
	Organism Taxid	:	3349
	Synonym	:	STILBENE SYNTHASE, STS, PINOSYLVIN-FORMING STILBENE SYNTHASE

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 4)

No.	Name	Count	Type	Full Name
1	3IO	4	Ligand/Ion	3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	3IO	2	Ligand/Ion	3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	3IO	2	Ligand/Ion	3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	CYS A:167 , PHE A:218 , ILE A:257 , GLY A:258 , PHE A:268 , HIS A:306 , ASN A:339 , PHE A:376 , HOH A:2097 , HOH A:2139	BINDING SITE FOR RESIDUE 3IO A 2000
2	AC2	SOFTWARE	CYS B:167 , PHE B:218 , ILE B:257 , PHE B:268 , HIS B:306 , ASN B:339 , PHE B:376 , HOH B:3056 , HOH B:3131	BINDING SITE FOR RESIDUE 3IO B 3000
3	AC3	SOFTWARE	CYS C:167 , PHE C:218 , ILE C:257 , GLY C:258 , PHE C:268 , HIS C:306 , ASN C:339 , PHE C:376 , HOH C:4020 , HOH C:4022 , HOH C:4148 , HOH C:4200	BINDING SITE FOR RESIDUE 3IO C 4000
4	AC4	SOFTWARE	CYS D:167 , PHE D:218 , ILE D:257 , GLY D:258 , PHE D:268 , HIS D:306 , GLY D:308 , ASN D:339 , PHE D:376 , HOH D:5101	BINDING SITE FOR RESIDUE 3IO D 5000

(no "SS Bond" information available for 1XES)

Asymmetric Unit

No.	Residues
1	Leu A:140	-	Pro A:141
2	Gly A:379	-	Leu A:380
3	Leu B:140	-	Pro B:141
4	Gly B:379	-	Leu B:380
5	Leu C:140	-	Pro C:141
6	Gly C:379	-	Leu C:380
7	Thr D:46	-	Gly D:47
8	Leu D:140	-	Pro D:141
9	Gly D:379	-	Leu D:380

(no "SAP(SNP)/Variant" information available for 1XES)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHALCONE_SYNTH	PS00441	Chalcone and stilbene synthases active site.	DPSS_PINSY	159-175	4	A:159-175 B:159-175 C:159-175 D:159-175

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHALCONE_SYNTH	PS00441	Chalcone and stilbene synthases active site.	DPSS_PINSY	159-175	2	A:159-175 B:159-175 - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHALCONE_SYNTH	PS00441	Chalcone and stilbene synthases active site.	DPSS_PINSY	159-175	2	- - C:159-175 D:159-175

(no "Exon" information available for 1XES)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:387
 aligned with DPSS_PINSY | Q02323 from UniProtKB/Swiss-Prot  Length:393

    Alignment length:387
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       
           DPSS_PINSY     6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
               SCOP domains d1xesa1 A:6-238 automated matches                                                                                                                                                                                                        d1xesa2 A:239-392 automated matches                                                                                                                        SCOP domains
               CATH domains 1xesA01 A:6-238  [code=3.40.47.10, no name defined]                                                                                                                                                                                      1xesA02 A:239-392  [code=3.40.47.10, no name defined]                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhh....eeeeeeeee....ee...hhhhhhhhhh....hhhhhh.hh.hhh......ee...hh.hhh.hh.hhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.eeeeee....ee.hhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhh.....eeeeeee............hhhhhhhhhhh..eeeeeeee...........eeeeeeeeee.........eeee..eee.....hhhhhhhhhhhhhhhhhhh.....hhhhheeee...hhhhhhhhhhhh......hhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..........eeeeeeee...eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------CHALCONE_SYNTH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xes A   6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385

Chain B from PDB  Type:PROTEIN  Length:387
 aligned with DPSS_PINSY | Q02323 from UniProtKB/Swiss-Prot  Length:393

    Alignment length:387
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       
           DPSS_PINSY     6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
               SCOP domains d1xesb1 B:6-238 automated matches                                                                                                                                                                                                        d1xesb2 B:239-392 automated matches                                                                                                                        SCOP domains
               CATH domains 1xesB01 B:6-238  [code=3.40.47.10, no name defined]                                                                                                                                                                                      1xesB02 B:239-392  [code=3.40.47.10, no name defined]                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeeeeeee....eehhhhhhhhhhhhh..........hhhhhhhhh....ee..........hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.eeeeee....ee.hhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhh....eeeeeeee.........hhhhh.hhhhhhhh..eeeeeeee...........eeeeeeeeee.......eeeeee..eeeeee..hhhhhhhhhh.hhhh.hhh.....hhhhheeee...hhhhhhhhhhhh......hhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..........eeeeeeee...eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------CHALCONE_SYNTH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xes B   6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385

Chain C from PDB  Type:PROTEIN  Length:378
 aligned with DPSS_PINSY | Q02323 from UniProtKB/Swiss-Prot  Length:393

    Alignment length:387
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       
           DPSS_PINSY     6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
               SCOP domains d1xesc1 C:6-238 automated matches                                                                                                                                                                                                        d1xesc2 C:239-392 automated matches                                                                                                                        SCOP domains
               CATH domains 1xesC01 C:6-238  [code=3.40.47.10, no name d       efined]                                                                                                                                                                               1xesC02 C:239-392  [code=3.40.47.10, no name defined]                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hh.hhh....eeeeeeeee....ee...hhhhhhhhhh...-------.............ee..........hhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhh.eeeeee....ee.hhhhhhhhhh......eeeeee....hhhhhhhhhhhhhhhhh....eeeeeeehhhhh........--hhhhhhhh..eeeeeeee...........eeeeeeeeee.........eeee..eee......hh.hhhhhhhhhhhhhhh.....hhhhheeee...hhhhhhhhhhhh......hhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..........eeeeeeee...eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------CHALCONE_SYNTH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xes C   6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNE-------KFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETH--SLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
                                    15        25        35        45   |     - |      65        75        85        95       105       115       125       135       145       155       165       175       185       195       205  |  | 215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       
                                                                      49      57                                                                                                                                                    208  |                                                                                                                                                                                     
                                                                                                                                                                                                                                       211

Chain D from PDB  Type:PROTEIN  Length:382
 aligned with DPSS_PINSY | Q02323 from UniProtKB/Swiss-Prot  Length:393

    Alignment length:388
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385        
           DPSS_PINSY     6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPIQ 393
               SCOP domains d1xesd1 D:6-238 automated matches                                                                                                                                                                                                        d1xesd2 D:239-393 automated matches                                                                                                                         SCOP domains
               CATH domains 1xesD01 D:6-238  [code=3.40.47.10, no name d    efined]                                                                                                                                                                                  1xesD02 D:239-393  [code=3.40.47.10, no name defined]                                                                                                       CATH domains
           Pfam domains (1) Chal_sti_synt_N-1xesD05 D:6-231                                                                                                                                                                                                   ---------Chal_sti_synt_C-1xesD01 D:241-391                                                                                                                      -- Pfam domains (1)
           Pfam domains (2) Chal_sti_synt_N-1xesD06 D:6-231                                                                                                                                                                                                   ---------Chal_sti_synt_C-1xesD02 D:241-391                                                                                                                      -- Pfam domains (2)
           Pfam domains (3) Chal_sti_synt_N-1xesD07 D:6-231                                                                                                                                                                                                   ---------Chal_sti_synt_C-1xesD03 D:241-391                                                                                                                      -- Pfam domains (3)
           Pfam domains (4) Chal_sti_synt_N-1xesD08 D:6-231                                                                                                                                                                                                   ---------Chal_sti_synt_C-1xesD04 D:241-391                                                                                                                      -- Pfam domains (4)
         Sec.struct. author ...hh.hhh.....eeeeeeee....ee...hhhhhhhhhh...----.........--.....ee..........hh.hhh.....hhhhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhh.eeeeee....ee.hhhhhhh.hhh.....eeeeee....hhhhhhhhhhhhhhhh....eeeeeeeehhhhh.........hhhhhhhhh..eeeeeeee...........eeeeeeeeee.........eeee..eee.........hhhhhhh.hhh.hhh..........eeee...hhhhhhhhhh........hhhhhhhhh....hhhhhhhhhhhhhh.hhh............eeeeeeee...eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------CHALCONE_SYNTH   -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xes D   6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNE----LKDKFKRIC--SAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPIQ 393
                                    15        25        35        45   |    55      | 65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385        
                                                                      49   54      62 65

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Thiolase-like (231)

Superfamily: Thiolase-like (231)

Family: automated matches (108)

Protein domain: automated matches (108)

Scots pine (Pinus sylvestris) [TaxId: 3349] (2)

1a	d1xesa1	A:6-238
1b	d1xesa2	A:239-392
1c	d1xesb1	B:6-238
1d	d1xesb2	B:239-392
1e	d1xesc1	C:6-238
1f	d1xesc2	C:239-392
1g	d1xesd1	D:6-238
1h	d1xesd2	D:239-393

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Peroxisomal Thiolase; Chain A, domain 1 (130)

Homologous Superfamily: [code=3.40.47.10, no name defined] (130)

Scots pine (Pinus sylvestris) (3)

1a	1xesD02	D:239-393
1b	1xesA02	A:239-392
1c	1xesC01	C:6-238
1d	1xesD01	D:6-238
1e	1xesA01	A:6-238
1f	1xesB01	B:6-238
1g	1xesB02	B:239-392
1h	1xesC02	C:239-392

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Thiolase (72)

Family: Chal_sti_synt_C (11)

Pinus sylvestris (Scots pine) (2)

1a	Chal_sti_synt_C-1xesD01	D:241-391
1b	Chal_sti_synt_C-1xesD02	D:241-391
1c	Chal_sti_synt_C-1xesD03	D:241-391
1d	Chal_sti_synt_C-1xesD04	D:241-391

Family: Chal_sti_synt_N (11)

Pinus sylvestris (Scots pine) (2)

2a	Chal_sti_synt_N-1xesD05	D:6-231
2b	Chal_sti_synt_N-1xesD06	D:6-231
2c	Chal_sti_synt_N-1xesD07	D:6-231
2d	Chal_sti_synt_N-1xesD08	D:6-231

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (DPSS_PINSY | Q02323)

molecular function
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0050198	pinosylvin synthase activity	Catalysis of the reaction: trans-cinnamoyl-CoA + 3 H(+) + 3 malonyl-CoA = 4 CO(2) + 4 CoA + pinosylvin.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
biological process
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		3IO	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Gly A:379 - Leu A:380	[ RasMol ]
		Gly B:379 - Leu B:380	[ RasMol ]
		Gly C:379 - Leu C:380	[ RasMol ]
		Gly D:379 - Leu D:380	[ RasMol ]
		Leu A:140 - Pro A:141	[ RasMol ]
		Leu B:140 - Pro B:141	[ RasMol ]
		Leu C:140 - Pro C:141	[ RasMol ]
		Leu D:140 - Pro D:141	[ RasMol ]
		Thr D:46 - Gly D:47	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

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	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1xes
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	DPSS_PINSY \| Q02323
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	2.3.1.-
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

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	(no 'MIM ID' available)
		Disease Information	:	OMIM

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		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
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		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	DPSS_PINSY \| Q02323
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	DPSS_PINSY \| Q02323	:	1u0u 1xet

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 4)

Sites (4, 4)

SS Bonds (0, 0)

Cis Peptide Bonds (9, 9)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (1, 8)

Pfam Domains (2, 8)

Gene Ontology (8, 8)

Visualization

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Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File