1XET - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF STILBENE SYNTHASE FROM PINUS SYLVESTRIS, COMPLEXED WITH METHYLMALONYL COA

Authors :   S. H. Ng, D. Chirgadze, D. Spiteller, T. L. Li, J. B. Spencer, T. L. Blundell

Date :   12 Sep 04 (Deposition) - 11 Apr 06 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. H. Ng, D. Chirgadze, D. Spiteller, T. L. Li, J. B. Spencer, T. L. Blundell
Crystal Structure Of Stilbene Synthase From Pinus Sylvestris, Complexed With Methylmalonyl Coa
To Be Published
PubMed: search
(for further references see the PDB file header)

Molecule 1 - DIHYDROPINOSYLVIN SYNTHASE
	Chains	:	A, B, C, D
	EC Number	:	2.3.1.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET28(A)
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Organism Common	:	SCOTS PINE
	Organism Scientific	:	PINUS SYLVESTRIS
	Organism Taxid	:	3349
	Synonym	:	STILBENE SYNTHASE, STS, PINOSYLVIN-FORMING STILBENE SYNTHASE

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 4)

No.	Name	Count	Type	Full Name
1	3IO	3	Ligand/Ion	3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID
2	MCA	1	Ligand/Ion	METHYLMALONYL-COENZYME A

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	3IO	1	Ligand/Ion	3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID
2	MCA	-1	Ligand/Ion	METHYLMALONYL-COENZYME A

Biological Unit 2 (2, 3)

No.	Name	Count	Type	Full Name
1	3IO	2	Ligand/Ion	3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID
2	MCA	1	Ligand/Ion	METHYLMALONYL-COENZYME A

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	CYS B:167 , PHE B:218 , ILE B:257 , GLY B:258 , PHE B:268 , HIS B:306 , ASN B:339 , PHE B:376 , HOH B:2062 , HOH B:2136 , HOH B:2159	BINDING SITE FOR RESIDUE 3IO B 2000
2	AC2	SOFTWARE	CYS C:167 , PHE C:218 , ILE C:257 , GLY C:258 , HIS C:306 , GLY C:308 , ASN C:339 , PHE C:376 , HOH C:3155	BINDING SITE FOR RESIDUE 3IO C 3000
3	AC3	SOFTWARE	THR D:135 , CYS D:167 , PHE D:218 , ILE D:257 , LEU D:266 , PHE D:268 , HIS D:306 , ASN D:339 , PHE D:376 , MCA D:4001 , HOH D:4195	BINDING SITE FOR RESIDUE 3IO D 4000
4	AC4	SOFTWARE	LYS D:57 , ARG D:60 , ILE D:61 , ARG D:64 , LEU D:209 , ASP D:210 , VAL D:213 , ILE D:257 , LEU D:270 , GLY D:308 , GLY D:309 , ARG D:310 , ALA D:311 , ILE D:312 , 3IO D:4000 , HOH D:4158 , HOH D:4171 , HOH D:4173 , HOH D:4174	BINDING SITE FOR RESIDUE MCA D 4001

(no "SS Bond" information available for 1XET)

Asymmetric Unit

No.	Residues
1	Leu A:140	-	Pro A:141
2	Gly A:379	-	Leu A:380
3	Leu B:140	-	Pro B:141
4	Gly B:379	-	Leu B:380
5	Leu C:140	-	Pro C:141
6	Gly C:379	-	Leu C:380
7	Leu D:140	-	Pro D:141
8	Gly D:379	-	Leu D:380

(no "SAP(SNP)/Variant" information available for 1XET)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHALCONE_SYNTH	PS00441	Chalcone and stilbene synthases active site.	DPSS_PINSY	159-175	4	A:159-175 B:159-175 C:159-175 D:159-175

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHALCONE_SYNTH	PS00441	Chalcone and stilbene synthases active site.	DPSS_PINSY	159-175	2	A:159-175 B:159-175 - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHALCONE_SYNTH	PS00441	Chalcone and stilbene synthases active site.	DPSS_PINSY	159-175	2	- - C:159-175 D:159-175

(no "Exon" information available for 1XET)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:387
 aligned with DPSS_PINSY | Q02323 from UniProtKB/Swiss-Prot  Length:393

    Alignment length:387
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       
           DPSS_PINSY     6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
               SCOP domains d1xeta1 A:6-238 automated matches                                                                                                                                                                                                        d1xeta2 A:239-392 automated matches                                                                                                                        SCOP domains
               CATH domains 1xetA01 A:6-238  [code=3.40.47.10, no name defined]                                                                                                                                                                                      1xetA02 A:239-392  [code=3.40.47.10, no name defined]                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhh....eeeeeeeee....eehhhhhhhhhhhhh....hhhhhhhhhhhhh......ee...hh.hhh.hh.hhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.eeeeee....ee.hhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhh.....eeeeeee............hhhhhhhhhhh..eeeeeeee...........eeeeeeeeee........eeeee..eeeee...hhhhhhhhhhhhhhhhhhh.....hhhhheeee...hhhhhhhhhhhh......hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh..........eeeeeeee...eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------CHALCONE_SYNTH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xet A   6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385

Chain B from PDB  Type:PROTEIN  Length:387
 aligned with DPSS_PINSY | Q02323 from UniProtKB/Swiss-Prot  Length:393

    Alignment length:387
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       
           DPSS_PINSY     6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
               SCOP domains d1xetb1 B:6-238 automated matches                                                                                                                                                                                                        d1xetb2 B:239-392 automated matches                                                                                                                        SCOP domains
               CATH domains 1xetB01 B:6-238  [code=3.40.47.10, no name defined]                                                                                                                                                                                      1xetB02 B:239-392  [code=3.40.47.10, no name defined]                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeeeeeee....eehhhhhhhhhhhhh....hhhhhhhhhhhhhhh....ee..........hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.hhhhh.eeeeee....ee.hhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhh....eeeeeeee.........hhhhhhhhhhhhhh..eeeeeeee...........eeeeeeeeee...hhh.eeeeee..eeeeee..hhhhhhhhhhhhhhhhhhh.....hhhhheeee...hhhhhhhhhhhh......hhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..........eeeeeeee...eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------CHALCONE_SYNTH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xet B   6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385

Chain C from PDB  Type:PROTEIN  Length:382
 aligned with DPSS_PINSY | Q02323 from UniProtKB/Swiss-Prot  Length:393

    Alignment length:389
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         
           DPSS_PINSY     4 VDFEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
               SCOP domains d1xetc1 C:4-238 automated matches                                                                                                                                                                                                          d1xetc2 C:239-392 automated matches                                                                                                                        SCOP domains
               CATH domains 1xetC01 C:4-238  [code=3.40.47.10, no name defin      ed]                                                                                                                                                                                  1xetC02 C:239-392  [code=3.40.47.10, no name defined]                                                                                                      CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hh.hhh.hhh.....eeeeeeee....eehhhhhhhhhhhhh.....------...hhhhh....ee..........hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.eeeeee....ee.hhhhhhhhhh......eeeeee....hhhhhhhhhhhhhhhhh...eeeeeeeehhhhh........-.hhhhhhhh..eeeeeeee...........eeeeeeeeee.........eeee..eee.....hhhhhhhhhhhhhhhhhhh.....hhhhheeee...hhhhhhhhhhhh......hhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..........eeeeeeee...eeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------CHALCONE_SYNTH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xet C   4 VDFEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHN------FKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETH-DSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 392
                                    13        23        33        43       | -    |   63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    | |213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         
                                                                          51     58                                                                                                                                                   208 |                                                                                                                                                                                      
                                                                                                                                                                                                                                        210

Chain D from PDB  Type:PROTEIN  Length:384
 aligned with DPSS_PINSY | Q02323 from UniProtKB/Swiss-Prot  Length:393

    Alignment length:388
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385        
           DPSS_PINSY     6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPIQ 393
               SCOP domains d1xetd1 D:6-238 automated matches                                                                                                                                                                                                        d1xetd2 D:239-393 automated matches                                                                                                                         SCOP domains
               CATH domains 1xetD01 D:6-238  [code=3.40.47.10, no name def    ined]                                                                                                                                                                                  1xetD02 D:239-393  [code=3.40.47.10, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hh.hhh....eeeeeeeee....eehhhhhhhhhhhhh.....----.hh.hhh.......ee..........hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.hhhhh.eeeeee....ee.hhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhh...eeeeeeee............hhhhhhhhhhh..eeeeeeee...........eeeeeeeeee.........eeee..eee.....hhhhhhhhhhhhhhhhhhh.....hhhhheeee...hhhhhhhhhhhhh.....hhhhhhhhh....hhhhhhhhhhhhhh.hhh............eeeeeeee...eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------CHALCONE_SYNTH   -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xet D   6 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHN----DKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPIQ 393
                                    15        25        35        45     |   -|       65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385        
                                                                        51   56

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Thiolase-like (231)

Superfamily: Thiolase-like (231)

Family: automated matches (108)

Protein domain: automated matches (108)

Scots pine (Pinus sylvestris) [TaxId: 3349] (2)

1a	d1xeta1	A:6-238
1b	d1xetb1	B:6-238
1c	d1xetb2	B:239-392
1d	d1xetc1	C:4-238
1e	d1xetc2	C:239-392
1f	d1xetd1	D:6-238
1g	d1xetd2	D:239-393
1h	d1xeta2	A:239-392

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Peroxisomal Thiolase; Chain A, domain 1 (130)

Homologous Superfamily: [code=3.40.47.10, no name defined] (130)

Scots pine (Pinus sylvestris) (3)

1a	1xetD02	D:239-393
1b	1xetC01	C:4-238
1c	1xetD01	D:6-238
1d	1xetA01	A:6-238
1e	1xetB01	B:6-238
1f	1xetA02	A:239-392
1g	1xetB02	B:239-392
1h	1xetC02	C:239-392

(no "Pfam Domain" information available for 1XET)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (DPSS_PINSY | Q02323)

molecular function
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0050198	pinosylvin synthase activity	Catalysis of the reaction: trans-cinnamoyl-CoA + 3 H(+) + 3 malonyl-CoA = 4 CO(2) + 4 CoA + pinosylvin.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
biological process
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
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	Cis Peptide Bonds
		Gly A:379 - Leu A:380	[ RasMol ]
		Gly B:379 - Leu B:380	[ RasMol ]
		Gly C:379 - Leu C:380	[ RasMol ]
		Gly D:379 - Leu D:380	[ RasMol ]
		Leu A:140 - Pro A:141	[ RasMol ]
		Leu B:140 - Pro B:141	[ RasMol ]
		Leu C:140 - Pro C:141	[ RasMol ]
		Leu D:140 - Pro D:141	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

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	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
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Access by PDB/NDB ID
	1xet
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
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		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
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Access by UniProt ID/Accession number
	DPSS_PINSY \| Q02323
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	2.3.1.-
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	DPSS_PINSY \| Q02323
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UniProtKB/Swiss-Prot
	DPSS_PINSY \| Q02323	:	1u0u 1xes

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 4)

Sites (4, 4)

SS Bonds (0, 0)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 4)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (1, 8)

CATH Domains (1, 8)

Pfam Domains (0, 0)

Gene Ontology (8, 8)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File