Chain A from PDB Type:PROTEIN Length:91
aligned with NLTP1_ORYSI | A2ZHF1 from UniProtKB/Swiss-Prot Length:116
Alignment length:91
35 45 55 65 75 85 95 105 115
NLTP1_ORYSI 26 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
SCOP domains d1uvca_ A: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) SCOP domains
CATH domains 1uvcA00 A:1-91 Plant lipid-transfer and hydrophobic proteins CATH domains
Pfam domains ------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhh.hhhhhh.....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.................. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------PLANT_LTP PDB: A:69-9- PROSITE
Transcript ------------------------------------------------------------------------------------------- Transcript
1uvc A 1 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 91
10 20 30 40 50 60 70 80 90
Chain A from PDB Type:PROTEIN Length:91
aligned with NLTP1_ORYSJ | Q0IQK9 from UniProtKB/Swiss-Prot Length:116
Alignment length:91
35 45 55 65 75 85 95 105 115
NLTP1_ORYSJ 26 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
SCOP domains d1uvca_ A: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) SCOP domains
CATH domains 1uvcA00 A:1-91 Plant lipid-transfer and hydrophobic proteins CATH domains
Pfam domains ------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhh.hhhhhh.....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.................. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) --------------------------------------------------------------------PLANT_LTP PDB: A:69-9- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------- Transcript
1uvc A 1 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 91
10 20 30 40 50 60 70 80 90
Chain B from PDB Type:PROTEIN Length:91
aligned with NLTP1_ORYSI | A2ZHF1 from UniProtKB/Swiss-Prot Length:116
Alignment length:91
35 45 55 65 75 85 95 105 115
NLTP1_ORYSI 26 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
SCOP domains d1uvcb_ B: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) SCOP domains
CATH domains 1uvcB00 B:1-91 Plant lipid-transfer and hydrophobic proteins CATH domains
Pfam domains (1) Tryp_alpha_amyl-1uvcB01 B:1-87 ---- Pfam domains (1)
Pfam domains (2) Tryp_alpha_amyl-1uvcB02 B:1-87 ---- Pfam domains (2)
Sec.struct. author .hhhhhhhhhh.hhhhhh.....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh............hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------PLANT_LTP PDB: B:69-9- PROSITE
Transcript ------------------------------------------------------------------------------------------- Transcript
1uvc B 1 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 91
10 20 30 40 50 60 70 80 90
Chain B from PDB Type:PROTEIN Length:91
aligned with NLTP1_ORYSJ | Q0IQK9 from UniProtKB/Swiss-Prot Length:116
Alignment length:91
35 45 55 65 75 85 95 105 115
NLTP1_ORYSJ 26 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
SCOP domains d1uvcb_ B: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) SCOP domains
CATH domains 1uvcB00 B:1-91 Plant lipid-transfer and hydrophobic proteins CATH domains
Pfam domains (1) Tryp_alpha_amyl-1uvcB01 B:1-87 ---- Pfam domains (1)
Pfam domains (2) Tryp_alpha_amyl-1uvcB02 B:1-87 ---- Pfam domains (2)
Sec.struct. author .hhhhhhhhhh.hhhhhh.....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh............hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) --------------------------------------------------------------------PLANT_LTP PDB: B:69-9- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------- Transcript
1uvc B 1 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 91
10 20 30 40 50 60 70 80 90
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |