1TU5 - JenaLib

Asym./Biol. Unit - manually (Jmol Viewer)

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF BOVINE PLASMA COPPER-CONTAINING AMINE OXIDASE

Authors :   M. Lunelli, M. L. Di Paolo, M. Biadene, V. Calderone, M. Scarpa, R. Batt A. Rigo, G. Zanotti

Date :   24 Jun 04 (Deposition) - 22 Feb 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.37

Chains :   Asym./Biol. Unit : A,B

Keywords :   Amine Oxidase, Oxidoreductase, Quinoenzyme, Tpq (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Lunelli, M. L. Di Paolo, M. Biadene, V. Calderone, R. Battistutta, M. Scarpa, A. Rigo, G. Zanotti
Crystal Structure Of Amine Oxidase From Bovine Serum.
J. Mol. Biol. V. 346 991 2005
PubMed-ID: 15701511 | Reference-DOI: 10.1016/J.JMB.2004.12.038
(for further references see the PDB file header)

Molecule 1 - COPPER AMINE OXIDASE, LIVER ISOZYME
	Chains	:	A, B
	EC Number	:	1.4.3.6
	Organism Common	:	CATTLE
	Organism Scientific	:	BOS TAURUS
	Organism Taxid	:	9913
	Synonym	:	AMINE OXIDASE [COPPER-CONTAINING], SERUM AMINE OXIDASE, SAO
	Tissue	:	PLASMA

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (6, 20)

No.	Name	Count	Type	Full Name
1	CA	4	Ligand/Ion	CALCIUM ION
2	CL	3	Ligand/Ion	CHLORIDE ION
3	CU	2	Ligand/Ion	COPPER (II) ION
4	NAG	7	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
5	NDG	2	Ligand/Ion	2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
6	TPQ	2	Mod. Amino Acid	5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE

Asymmetric Unit (18, 18)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	PHE A:129 , GLN A:132 , ASN A:136 , THR A:138 , VAL A:156 , PRO A:162 , NAG A:801 , HOH A:912	BINDING SITE FOR RESIDUE NAG A 800
02	AC2	SOFTWARE	LEU A:78 , NAG A:800 , NAG A:802	BINDING SITE FOR RESIDUE NAG A 801
03	AC3	SOFTWARE	NAG A:801	BINDING SITE FOR RESIDUE NAG A 802
04	AC4	SOFTWARE	LYS A:206 , ASN A:231 , LEU B:447	BINDING SITE FOR RESIDUE NAG A 803
05	AC5	SOFTWARE	THR A:570 , GLU A:572 , ASN A:665	BINDING SITE FOR RESIDUE NDG A 804
06	AC6	SOFTWARE	PHE B:129 , GLN B:132 , ASN B:136 , THR B:138 , VAL B:156 , PRO B:162 , NAG B:801 , HOH B:1959	BINDING SITE FOR RESIDUE NDG B 800
07	AC7	SOFTWARE	NDG B:800 , NAG B:802 , HOH B:2043	BINDING SITE FOR RESIDUE NAG B 801
08	AC8	SOFTWARE	PRO B:554 , NAG B:801	BINDING SITE FOR RESIDUE NAG B 802
09	AC9	SOFTWARE	GLU B:572 , ASN B:665	BINDING SITE FOR RESIDUE NAG B 804
10	BC1	SOFTWARE	HIS A:519 , HIS A:521 , HIS A:683 , HOH A:905 , HOH A:908	BINDING SITE FOR RESIDUE CU A 901
11	BC2	SOFTWARE	ASP A:528 , LEU A:529 , ASP A:530 , ASP A:672 , LEU A:673 , HOH A:931	BINDING SITE FOR RESIDUE CA A 902
12	BC3	SOFTWARE	GLU A:571 , PHE A:662 , ASN A:664 , GLU A:666 , HOH A:934 , HOH A:976	BINDING SITE FOR RESIDUE CA A 903
13	BC4	SOFTWARE	ASN A:481 , ARG A:705	BINDING SITE FOR RESIDUE CL A 904
14	BC5	SOFTWARE	HIS B:519 , HIS B:521 , HIS B:683 , HOH B:1906 , HOH B:1907	BINDING SITE FOR RESIDUE CU B 901
15	BC6	SOFTWARE	ASP B:528 , LEU B:529 , ASP B:530 , ASP B:672 , LEU B:673 , HOH B:1995	BINDING SITE FOR RESIDUE CA B 1902
16	BC7	SOFTWARE	GLU B:571 , PHE B:662 , ASN B:664 , GLU B:666 , HOH B:1952 , HOH B:2029	BINDING SITE FOR RESIDUE CA B 1903
17	BC8	SOFTWARE	ASN B:481 , ARG B:705	BINDING SITE FOR RESIDUE CL B 1904
18	BC9	SOFTWARE	GLN A:559 , ARG B:382 , SER B:618	BINDING SITE FOR RESIDUE CL B 1905

Asymmetric/Biological Unit

No.	Residues
1	A:197	-	A:198
2	A:403	-	A:429
3	B:197	-	B:198
4	B:403	-	B:429

Asymmetric/Biological Unit

No.	Residues
1	Gly A:143	-	Pro A:144
2	Leu A:145	-	Pro A:146
3	Ala A:213	-	Pro A:214
4	Ile A:690	-	Pro A:691
5	Gly B:143	-	Pro B:144
6	Leu B:145	-	Pro B:146
7	Ala B:213	-	Pro B:214
8	Ile B:690	-	Pro B:691

(no "SAP(SNP)/Variant" information available for 1TU5)

Asymmetric/Biological Unit (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	COPPER_AMINE_OXID_1	PS01164	Copper amine oxidase topaquinone signature.	AOCX_BOVIN	459-472	2	A:459-472 B:459-472
2	COPPER_AMINE_OXID_2	PS01165	Copper amine oxidase copper-binding site signature.	AOCX_BOVIN	678-691	2	A:678-691 B:678-691

Asymmetric/Biological Unit (4, 8)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSBTAT00000001383	1	ENSBTAE00000011032	chr19:44323010-44324656	1647	AOCX_BOVIN	1-533	533	2	A:57-533 (gaps) B:57-533 (gaps)	477 477
1.2	ENSBTAT00000001383	2	ENSBTAE00000402680	chr19:44324876-44325161	286	AOCX_BOVIN	533-628	96	2	A:533-628 B:533-628	96 96
1.3	ENSBTAT00000001383	3	ENSBTAE00000408280	chr19:44325567-44325696	130	AOCX_BOVIN	628-671	44	2	A:628-671 B:628-671	44 44
1.4	ENSBTAT00000001383	4	ENSBTAE00000011035	chr19:44326418-44326988	571	AOCX_BOVIN	672-762	91	2	A:672-717 B:672-717	46 46

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:633
 aligned with AOCX_BOVIN | Q29437 from UniProtKB/Swiss-Prot  Length:762

    Alignment length:661
                                    66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716 
           AOCX_BOVIN    57 QLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGGQPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMNSAPRGVQSGDRSTWFGIYYNITKGGPYLHPVGLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQVNVVVIPDDGTGGFWSLKSQVPPGPTPPLQFHPQGPRFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQGERLAYEISLQEAGAVYGGNTPAAMLTRYMDSGFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRRHHSDFLSHYFGGVAQTVLVFRSVSTMLNYDYVWDMVFYPNGAIEVKLHATGYISSAFLFGAARRYGNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPRYLYLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMD 717
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1tu5A01 A:57-164  [code=3.10.450.40, no name defined]                                                       1tu5A02 A:165-291  [code=3.10.450.40, no name defined]                                                                         1                            tu5A03 A:292-717 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                               CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhh.............eeeeeeeee..hhhhhhhhhhhh......eeeeeeee......eeeeeeee......eeeehhhhhhh..ee.hhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee............eeeeeeee.....hhhh.eeeeeeeee....hhhhheeeeeee..eee.hhhhhhhhhhh..........----------------------------.eeee..eeee..eeeeeeee...eeeeeeeee..eeeeeeeeeeeeeeee...hhhhhhheee.hhh...................eeeeeeeee.....eeeeeeeeeeeeeeeeeeee...........eeeeeeeeeeeee......eeeeeee.....eeeeeee......ee...hhhh.eeeee..eeee.eeeeeeeeeee.....eeeeeeeeeeeeeeee..eeeeeeeeeeeeeee..hhhh.eee.......eeeeeeeee.....eeeeeeeee............hhhhhhhh.eeeeeee......................hhhhhh.......eeeeeeeeeeeee..hhhhh.........eeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: A:57-533 (gaps) UniProt: 1-533 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                   ----------------------------------------------------------------------------------------------Exon 1.3  PDB: A:628-671 UniProt: 628-671   Exon 1.4  PDB: A:672-717 UniProt: 672-762      Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: A:533-628 UniProt: 533-628                                                       ----------------------------------------------------------------------------------------- Transcript 1 (2)
                 1tu5 A  57 QLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGGQPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMNSAPRGVQSGDRSTWFGIYYNITKGGPYLHPVGLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQVNVVVIPD----------------------------RFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQGERLAYEISLQEAGAVYGGNTPAAMLTRYMDSGFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRRHHSDFLSHYFGGVAQTVLVFRSVSTMLNyDYVWDMVFYPNGAIEVKLHATGYISSAFLFGAARRYGNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPRYLYLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMD 717
                                    66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286     |   -         -         -    |  326       336       346       356       366       376       386       396       406       416       426       436       446       456       466   |   476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716 
                                                                                                                                                                                                                                                                     292                          321                                                                                                                                                  470-TPQ

Chain B from PDB  Type:PROTEIN  Length:633
 aligned with AOCX_BOVIN | Q29437 from UniProtKB/Swiss-Prot  Length:762

    Alignment length:661
                                    66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716 
           AOCX_BOVIN    57 QLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGGQPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMNSAPRGVQSGDRSTWFGIYYNITKGGPYLHPVGLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQVNVVVIPDDGTGGFWSLKSQVPPGPTPPLQFHPQGPRFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQGERLAYEISLQEAGAVYGGNTPAAMLTRYMDSGFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRRHHSDFLSHYFGGVAQTVLVFRSVSTMLNYDYVWDMVFYPNGAIEVKLHATGYISSAFLFGAARRYGNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPRYLYLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMD 717
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1tu5B01 B:57-170  [code=3.10.450.40, no name defined]                                                             1tu5B02 B:171-292  [code=3.10.450.40, no name defined]                                                                    ----------------------------1tu5B03 B:321-717 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                              CATH domains
           Pfam domains (1) --------Cu_amine_oxidN2-1tu5B01 B:65-151                                                       ----------------Cu_amine_oxidN3-1tu5B03 B:168-268                                                                    ----------------------------------------------------Cu_amine_oxid-1tu5B05 B:321-717                                                                                                                                                                                                                                                                                                                                                                               Pfam domains (1)
           Pfam domains (2) --------Cu_amine_oxidN2-1tu5B02 B:65-151                                                       ----------------Cu_amine_oxidN3-1tu5B04 B:168-268                                                                    ----------------------------------------------------Cu_amine_oxid-1tu5B06 B:321-717                                                                                                                                                                                                                                                                                                                                                                               Pfam domains (2)
         Sec.struct. author ......hhhhhhhhhhhhhhhh..............eeeeeeeee..hhhhhhhhhhhh......eeeeeeee......eeeeeeee......eeeehhhhhhh..ee.hhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee............eeeeeeee.....hhhh.eeeeeeeee....hhhhheeeeeee..eee.hhhhhhhhhhh..........----------------------------.eeee..eeee..eeeeeeee...eeeeeeeee..eeeeeeeeeeeeeeee...hhhhhhheee.hhh...................eeeeeeeee.....eeeeeeeeeeeeeeeeeeee...........eeeeeeeeeeeee......eeeeeee.....eeeeeee......ee...hhhh.eeeee..eeee.eeeeeeeeeee.....eeeeeeeeeeeeeeee..eeeeeeeeeeeeeee..hhhh.eee.......eeeeeeeee.....eeeeeeeee............hhhhhhhh.eeeeeee......................hhhhhh.......eeeeeeeeeeeee..hhhhh.........eeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: B:57-533 (gaps) UniProt: 1-533 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                   ----------------------------------------------------------------------------------------------Exon 1.3  PDB: B:628-671 UniProt: 628-671   Exon 1.4  PDB: B:672-717 UniProt: 672-762      Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: B:533-628 UniProt: 533-628                                                       ----------------------------------------------------------------------------------------- Transcript 1 (2)
                 1tu5 B  57 QLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGGQPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMNSAPRGVQSGDRSTWFGIYYNITKGGPYLHPVGLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQVNVVVIPD----------------------------RFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQGERLAYEISLQEAGAVYGGNTPAAMLTRYMDSGFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRRHHSDFLSHYFGGVAQTVLVFRSVSTMLNyDYVWDMVFYPNGAIEVKLHATGYISSAFLFGAARRYGNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPRYLYLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMD 717
                                    66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286     |   -         -         -    |  326       336       346       356       366       376       386       396       406       416       426       436       446       456       466   |   476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716 
                                                                                                                                                                                                                                                                     292                          321                                                                                                                                                  470-TPQ

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 1TU5)

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Roll (3276)

Topology: Nuclear Transport Factor 2; Chain: A, (517)

Homologous Superfamily: [code=3.10.450.40, no name defined] (77)

Cattle (Bos taurus) (2)

1a	1tu5A01	A:57-164
1b	1tu5B01	B:57-170
1c	1tu5B02	B:171-292
1d	1tu5A02	A:165-291

Class: Mainly Beta (13760)

Architecture: Distorted Sandwich (506)

Topology: Beta-galactosidase; Chain A, domain 5 (250)

Homologous Superfamily: Copper amine oxidase, Domain 3 (74)

Cattle (Bos taurus) (2)

2a	1tu5A03	A:292-717
2b	1tu5B03	B:321-717

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: CuAO_N2_N3 (40)

Family: Cu_amine_oxidN2 (27)

Bos taurus (Bovine) (2)

1a	Cu_amine_oxidN2-1tu5B01	B:65-151
1b	Cu_amine_oxidN2-1tu5B02	B:65-151

Family: Cu_amine_oxidN3 (37)

Bos taurus (Bovine) (2)

2a	Cu_amine_oxidN3-1tu5B03	B:168-268
2b	Cu_amine_oxidN3-1tu5B04	B:168-268

Clan: no clan defined [family: Cu_amine_oxid] (40)

Family: Cu_amine_oxid (40)

Bos taurus (Bovine) (2)

3a	Cu_amine_oxid-1tu5B05	B:321-717
3b	Cu_amine_oxid-1tu5B06	B:321-717

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (AOCX_BOVIN | Q29437)

molecular function
	GO:0052595	aliphatic-amine oxidase activity	Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.
	GO:0052594	aminoacetone:oxygen oxidoreductase(deaminating) activity	Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.
	GO:0005507	copper ion binding	Interacting selectively and non-covalently with copper (Cu) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0052596	phenethylamine:oxygen oxidoreductase (deaminating) activity	Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.
	GO:0008131	primary amine oxidase activity	Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.
	GO:0048038	quinone binding	Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
	GO:0052593	tryptamine:oxygen oxidoreductase (deaminating) activity	Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.
biological process
	GO:0009308	amine metabolic process	The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

Asymmetric/Biological Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Ala A:213 - Pro A:214	[ RasMol ]
		Ala B:213 - Pro B:214	[ RasMol ]
		Gly A:143 - Pro A:144	[ RasMol ]
		Gly B:143 - Pro B:144	[ RasMol ]
		Ile A:690 - Pro A:691	[ RasMol ]
		Ile B:690 - Pro B:691	[ RasMol ]
		Leu A:145 - Pro A:146	[ RasMol ]
		Leu B:145 - Pro B:146	[ RasMol ]

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Access by PDB/NDB ID
	1tu5
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
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	AOCX_BOVIN \| Q29437
		Comparative Protein Structure Models	:	ModBase
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		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	1.4.3.6
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

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		Disease Information	:	OMIM

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		Age Related Information	:	GenAge

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
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Access by UniProt ID/Accession number
	AOCX_BOVIN \| Q29437
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	AOCX_BOVIN \| Q29437	:	2pnc

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 20)

Sites (18, 18)

SS Bonds (4, 4)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 4)

Exons (4, 8)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (2, 6)

Pfam Domains (3, 6)

Gene Ontology (13, 13)

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File