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(-) Description

Title :  RIML- RIBOSOMAL L7/L12 ALPHA-N-PROTEIN ACETYLTRANSFERASE CRYSTAL FORM 2 (APO)
 
Authors :  M. W. Vetting, L. P. De Carvalho, S. L. Roderick, J. S. Blanchard
Date :  29 Jan 04  (Deposition) - 15 Mar 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Acetyltransferase, Gnat, Alpha-N-Protein Acetyltransferase, Coenzyme A, L7/L12, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. W. Vetting, L. P. De Carvalho, S. L. Roderick, J. S. Blanchard
A Novel Dimeric Structure Of The Riml Nalpha-Acetyltransferase From Salmonella Typhimurium.
J. Biol. Chem. V. 280 22108 2005
PubMed-ID: 15817456  |  Reference-DOI: 10.1074/JBC.M502401200

(-) Compounds

Molecule 1 - ACETYL TRANSFERASE
    ChainsA
    EC Number2.3.1.-
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28A+
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneRIML
    Organism ScientificSALMONELLA TYPHIMURIUM
    Organism Taxid99287
    StrainLT2
    SynonymACETYLATING ENZYME FOR N-TERMINAL OF RIBOSOMAL PROTEIN L7/L12, RIML

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1S7K)

(-) Sites  (0, 0)

(no "Site" information available for 1S7K)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1S7K)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1S7K)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1S7K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1S7K)

(-) Exons   (0, 0)

(no "Exon" information available for 1S7K)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:158
 aligned with Q8ZPC0_SALTY | Q8ZPC0 from UniProtKB/TrEMBL  Length:179

    Alignment length:177
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       
         Q8ZPC0_SALTY     3 EIIPVSTTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIEPINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARIIDAD 179
               SCOP domains d1s7ka_ A: automated matches                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------Acetyltransf_3-1s7kA01                    A:10-151                                                                                            ---------------------------- Pfam domains
         Sec.struct. author .eee....eeeee.hhhhhhhhhhhhhhh-------------------hhhhhhhhhhhhhhh..eeeeeee..eeeeeeeeeeee....eeeeeeee.hhhh..hhhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s7k A   3 EIIPVSTTLELRAADESHVPALHQLVLKN-------------------TRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIEPINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARIIDAD 179
                                    12        22        |-         -        52        62        72        82        92       102       112       122       132       142       152       162       172       
                                                       31                  51                                                                                                                                

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1S7K)

(-) Pfam Domains  (1, 1)

Asymmetric Unit

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q8ZPC0_SALTY | Q8ZPC0)
molecular function
    GO:0008080    N-acetyltransferase activity    Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016746    transferase activity, transferring acyl groups    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
    GO:0017198    N-terminal peptidyl-serine acetylation    The acetylation of the N-terminal serine of proteins to form the derivative N-acetyl-L-serine.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8ZPC0_SALTY | Q8ZPC01s7f 1s7l 1s7n 1z9u

(-) Related Entries Specified in the PDB File

1s7f THE SAME PROTEIN IN DIFFERENT SPACE GROUP (APO FORM 1)
1s7l THE SAME PROTEIN IN COMPLEX WITH COA BUT IN A DIFFERENT SPACE GROUP, AND WITH THE SULFHYDRYL OF COA IN A DISULFIDE BOND WITH CYS134
1s7n THE SAME PROTEIN IN COMPLEX WITH COENZYME A (COA FREE SULFHYDRYL)