Chain A from PDB Type:PROTEIN Length:178
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:178
241
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 |
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHSEEPAL-- -
SCOP domains d1rqca_ A: Peptide deformylase SCOP domains
CATH domains 1rqcA00 A:66-243 Peptide Deformylase CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh........hhhhhhhhhhhhhhhhhh...eee.hhhh....eeeee.hhhhh....eeeeeeeeeeee...eeeeeeee..eeeeeeeeeee.eeeeeee.....eeeeeeehhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc A 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHSEEPLEHH 243
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Chain B from PDB Type:PROTEIN Length:178
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:178
241
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 |
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHSEEPAL-- -
SCOP domains d1rqcb_ B: Peptide deformylase SCOP domains
CATH domains 1rqcB00 B:66-243 Peptide Deformylase CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh........hhhhhhhhhhhhhhhhhh...eee.hhhh....eeeee.hhhhh....eeeeeeeeeeee...eeeeee.........eeeeee.eeeeeee.....eeeeeeehhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc B 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHSEEPLEHH 243
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Chain C from PDB Type:PROTEIN Length:168
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:168
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKA 233
SCOP domains d1rqcc_ C: Peptide deformylase SCOP domains
CATH domains 1rqcC00 C:66-233 Peptide Deformylase CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ......hhhhhh........hhhhhhhhhhhhhhhhhh...eee.hhhh....eeee..hhhhh.....eeeeeeeeeee...eeeeee.........eeeeee.eeeeeee.....eeeeeeehhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1rqc C 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKA 233
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225
96-MSE 212-MSE
100-MSE
Chain D from PDB Type:PROTEIN Length:173
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:173
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHSEE 238
SCOP domains d1rqcd_ D: Peptide deformylase SCOP domains
CATH domains 1rqcD00 D:66-238 Peptide Deformylase CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhh........hhhhhhhhhhhhhhhhhh...eee.hhhh....eeee............eeeeeeeeeee...eeeeee.........eeeeee.eeeeeee.....eeeeeeehhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc D 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHSEE 238
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Chain E from PDB Type:PROTEIN Length:175
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:175
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHSEEPA 240
SCOP domains d1rqce_ E: Peptide deformylase SCOP domains
CATH domains 1rqcE00 E:66-240 Peptide Deformylase CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh.........hhhhhhhhhhhhhhhhh...eee.hhhh....eeeee.hhhhh....eeeeeeeeeeee...eeeeee.........eeeeee..eeeeee.....eeeeeehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc E 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHSEEPL 240
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Chain F from PDB Type:PROTEIN Length:172
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:172
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHSE 237
SCOP domains d1rqcf_ F: Peptide deformylase SCOP domains
CATH domains 1rqcF00 F:66-237 Peptide Deformylase CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh........hhhhhhhhhhhhhhhhhh...eee.hhhh....eeee............eeeeeeeeeee...eeeeee.........eeeeee..eeeeee.....eeeeeehhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc F 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHSE 237
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Chain G from PDB Type:PROTEIN Length:171
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:171
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHS 236
SCOP domains d1rqcg_ G: Peptide deformylase SCOP domains
CATH domains 1rqcG00 G:66-236 Peptide Deformylase CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh........hhhhhhhhhhhhhhhhhh...eee.hhhh....eeeee.hhhhh....eeeeeeeeeeee...eeeeee.........eeeeee..eeeeee.....eeeeee.hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc G 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHS 236
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Chain H from PDB Type:PROTEIN Length:173
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:173
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHSEE 238
SCOP domains d1rqch_ H: Peptide deformylase SCOP domains
CATH domains 1rqcH00 H:66-238 Peptide Deformylase CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh........hhhhhhhhhhhhhhhhhh...eee.hhhh....eeee..hhhhh.....eeeeeeeeeee...eeeeee.........eeeeee..eeeeee.....eeeeee.hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc H 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHSEE 238
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Chain I from PDB Type:PROTEIN Length:171
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:171
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHS 236
SCOP domains d1rqci_ I: Peptide deformylase SCOP domains
CATH domains 1rqcI00 I:66-236 Peptide Deformylase CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh........hhhhhhhhhhhhhhhhhhh..eee.hhhh....eeee............eeeeeeeeeee...eeeeeee.......eeeeeee..eeeeee.....eeeeeehhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc I 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHS 236
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Chain J from PDB Type:PROTEIN Length:171
aligned with Q8I372_PLAF7 | Q8I372 from UniProtKB/TrEMBL Length:241
Alignment length:171
75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235
Q8I372_PLAF7 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHS 236
SCOP domains d1rqcj_ J: Peptide deformylase SCOP domains
CATH domains 1rqcJ00 J:66-236 Peptide Deformylase CATH domains
Pfam domains (1) Pep_deformylase-1rqcJ01 J:66-218 ------------------ Pfam domains (1)
Pfam domains (2) Pep_deformylase-1rqcJ02 J:66-218 ------------------ Pfam domains (2)
Pfam domains (3) Pep_deformylase-1rqcJ03 J:66-218 ------------------ Pfam domains (3)
Pfam domains (4) Pep_deformylase-1rqcJ04 J:66-218 ------------------ Pfam domains (4)
Pfam domains (5) Pep_deformylase-1rqcJ05 J:66-218 ------------------ Pfam domains (5)
Pfam domains (6) Pep_deformylase-1rqcJ06 J:66-218 ------------------ Pfam domains (6)
Pfam domains (7) Pep_deformylase-1rqcJ07 J:66-218 ------------------ Pfam domains (7)
Pfam domains (8) Pep_deformylase-1rqcJ08 J:66-218 ------------------ Pfam domains (8)
Pfam domains (9) Pep_deformylase-1rqcJ09 J:66-218 ------------------ Pfam domains (9)
Pfam domains (10) Pep_deformylase-1rqcJ10 J:66-218 ------------------ Pfam domains (10)
Sec.struct. author ......hhhhhh........hhhhhhhhhhhhhhhhhh...eee.hhhh....eeeee.hhhhh....eeeeeeeeeeee...eeeeee.........eeeeee.eeeeeee.....eeeeeeehhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rqc J 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKmFDImYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKmTQVDKKKVRPKLNELIRDYKATHS 236
75 85 95| | 105 115 125 135 145 155 165 175 185 195 205 |215 225 235
96-MSE 212-MSE
100-MSE
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |